RNA–Protein interactions for RNA: ENST00000549209.5

SMARCC2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-206ENST00000549209 C1QBPQ07021 282 aaKnown RBP11.49□□□□□ -0.57
SMARCC2-206ENST00000549209 MEGF6O75095 1541 aa11.49□□□□□ -0.57
SMARCC2-206ENST00000549209 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
SMARCC2-206ENST00000549209 EN1Q05925 392 aaPredicted RBP11.48□□□□□ -0.57
SMARCC2-206ENST00000549209 KNSTRNQ9Y448 316 aa11.48□□□□□ -0.57
SMARCC2-206ENST00000549209 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
SMARCC2-206ENST00000549209 BAG6P46379 1132 aa11.47□□□□□ -0.57
SMARCC2-206ENST00000549209 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
SMARCC2-206ENST00000549209 TNNT2P45379 298 aaPredicted RBP11.46□□□□□ -0.57
SMARCC2-206ENST00000549209 SF3B2Q13435 895 aaKnown RBP11.46□□□□□ -0.57
SMARCC2-206ENST00000549209 EIF4A2Q14240 407 aaKnown RBP11.46□□□□□ -0.57
SMARCC2-206ENST00000549209 USHBP1Q8N6Y0 703 aa11.46□□□□□ -0.57
SMARCC2-206ENST00000549209 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.58
SMARCC2-206ENST00000549209 PARD3Q8TEW0 1356 aa11.45□□□□□ -0.58
SMARCC2-206ENST00000549209 KCNQ2O43526 872 aa11.45□□□□□ -0.58
SMARCC2-206ENST00000549209 APBA3O96018 575 aa11.45□□□□□ -0.58
SMARCC2-206ENST00000549209 EZH2Q15910 746 aaKnown RBP11.45□□□□□ -0.58
SMARCC2-206ENST00000549209 MORC1Q86VD1 984 aa11.45□□□□□ -0.58
SMARCC2-206ENST00000549209 PROM2Q8N271 834 aa11.45□□□□□ -0.58
SMARCC2-206ENST00000549209 EYA1Q99502 592 aa11.45□□□□□ -0.58
SMARCC2-206ENST00000549209 PLSCR1O15162 318 aa11.44□□□□□ -0.58
SMARCC2-206ENST00000549209 PPM1GO15355 546 aaPredicted RBP11.44□□□□□ -0.58
SMARCC2-206ENST00000549209 CAPN15O75808 1086 aa11.44□□□□□ -0.58
SMARCC2-206ENST00000549209 ZCRB1Q8TBF4 217 aaKnown RBP11.44□□□□□ -0.58
SMARCC2-206ENST00000549209 RGPD2P0DJD1 1756 aa11.43□□□□□ -0.58
SMARCC2-206ENST00000549209 IGSF1Q8N6C5 1336 aa11.42□□□□□ -0.58
SMARCC2-206ENST00000549209 CYP27B1O15528 508 aa11.42□□□□□ -0.58
SMARCC2-206ENST00000549209 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
SMARCC2-206ENST00000549209 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
SMARCC2-206ENST00000549209 SHANK3Q9BYB0 1731 aa11.41□□□□□ -0.58
SMARCC2-206ENST00000549209 IL13P35225 146 aa11.41□□□□□ -0.58
SMARCC2-206ENST00000549209 PLEKHG2Q9H7P9 1386 aa11.41□□□□□ -0.58
SMARCC2-206ENST00000549209 MAP2P11137 1827 aaKnown RBP11.4□□□□□ -0.58
SMARCC2-206ENST00000549209 MTHFSP49914 203 aa11.4□□□□□ -0.58
SMARCC2-206ENST00000549209 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
SMARCC2-206ENST00000549209 CC2D1BQ5T0F9 858 aaKnown RBP11.4□□□□□ -0.58
SMARCC2-206ENST00000549209 RAPGEF4Q8WZA2 1011 aa11.4□□□□□ -0.58
SMARCC2-206ENST00000549209 ACSBG1Q96GR2 724 aa11.4□□□□□ -0.58
SMARCC2-206ENST00000549209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.4□□□□□ -0.581e-8■■■□□ 14.9
SMARCC2-206ENST00000549209 KDRP35968 1356 aa11.4□□□□□ -0.59
SMARCC2-206ENST00000549209 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
SMARCC2-206ENST00000549209 NHSQ6T4R5 1651 aa11.39□□□□□ -0.59
SMARCC2-206ENST00000549209 RREB1Q92766 1687 aa11.39□□□□□ -0.59
SMARCC2-206ENST00000549209 PRIM1P49642 420 aaKnown RBP11.38□□□□□ -0.59
SMARCC2-206ENST00000549209 AEBP1Q8IUX7 1158 aa11.38□□□□□ -0.59
SMARCC2-206ENST00000549209 RGPD3A6NKT7 1758 aaPredicted RBP11.38□□□□□ -0.59
SMARCC2-206ENST00000549209 RGPD4Q7Z3J3 1758 aa11.38□□□□□ -0.59
SMARCC2-206ENST00000549209 COL3A1P02461 1466 aaPredicted RBP11.38□□□□□ -0.59
SMARCC2-206ENST00000549209 PCDH11XQ9BZA7 1347 aa11.37□□□□□ -0.59
SMARCC2-206ENST00000549209 PCDH11YQ9BZA8 1340 aa11.37□□□□□ -0.59
SMARCC2-206ENST00000549209 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
SMARCC2-206ENST00000549209 TXNRD1Q16881 649 aa11.37□□□□□ -0.59
SMARCC2-206ENST00000549209 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
SMARCC2-206ENST00000549209 PKD1L3Q7Z443 1732 aa11.37□□□□□ -0.59
SMARCC2-206ENST00000549209 NUP188Q5SRE5 1749 aa11.36□□□□□ -0.59
SMARCC2-206ENST00000549209 PSDA5PKW4 1024 aaPredicted RBP11.36□□□□□ -0.59
SMARCC2-206ENST00000549209 R3HDM1Q15032 1099 aaKnown RBP11.36□□□□□ -0.59
SMARCC2-206ENST00000549209 LRRC4BQ9NT99 713 aa11.36□□□□□ -0.59
SMARCC2-206ENST00000549209 PHKG2P15735 406 aa11.34□□□□□ -0.59
SMARCC2-206ENST00000549209 ZNF219Q9P2Y4 722 aaPredicted RBP11.34□□□□□ -0.59
SMARCC2-206ENST00000549209 SPG7Q9UQ90 795 aa11.34□□□□□ -0.59
SMARCC2-206ENST00000549209 PPP2R1AP30153 589 aa11.33□□□□□ -0.6
SMARCC2-206ENST00000549209 SULT6B1Q6IMI4 303 aa11.33□□□□□ -0.6
SMARCC2-206ENST00000549209 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
SMARCC2-206ENST00000549209 BTAF1O14981 1849 aa11.32□□□□□ -0.6
SMARCC2-206ENST00000549209 DIAPH1O60610 1272 aaKnown RBP11.32□□□□□ -0.6
SMARCC2-206ENST00000549209 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
SMARCC2-206ENST00000549209 PIGBQ92521 554 aa11.32□□□□□ -0.6
SMARCC2-206ENST00000549209 PDGFDQ9GZP0 370 aaPredicted RBP11.32□□□□□ -0.6
SMARCC2-206ENST00000549209 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
SMARCC2-206ENST00000549209 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
SMARCC2-206ENST00000549209 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
SMARCC2-206ENST00000549209 KDM6AO15550 1401 aaPredicted RBP11.31□□□□□ -0.6
SMARCC2-206ENST00000549209 DOT1LQ8TEK3 1739 aa11.31□□□□□ -0.6
SMARCC2-206ENST00000549209 KCNQ4P56696 695 aa11.3□□□□□ -0.6
SMARCC2-206ENST00000549209 CNGB1Q14028 1251 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-206ENST00000549209 SLC15A2Q16348 729 aa11.3□□□□□ -0.6
SMARCC2-206ENST00000549209 ZNF827Q17R98 1081 aa11.3□□□□□ -0.6
SMARCC2-206ENST00000549209 AMOTQ4VCS5 1084 aa11.3□□□□□ -0.6
SMARCC2-206ENST00000549209 PLEKHO1Q53GL0 409 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-206ENST00000549209 AKT1S1Q96B36 256 aa11.3□□□□□ -0.6
SMARCC2-206ENST00000549209 SYTL4Q96C24 671 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-206ENST00000549209 ABCB7O75027 752 aa11.29□□□□□ -0.6
SMARCC2-206ENST00000549209 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
SMARCC2-206ENST00000549209 LRP5O75197 1615 aa11.28□□□□□ -0.6
SMARCC2-206ENST00000549209 ERVV-2B6SEH9 535 aa11.28□□□□□ -0.6
SMARCC2-206ENST00000549209 HMOX1P09601 288 aa11.28□□□□□ -0.6
SMARCC2-206ENST00000549209 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-206ENST00000549209 ZNF530Q6P9A1 599 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-206ENST00000549209 DCAF5Q96JK2 942 aa11.28□□□□□ -0.6
SMARCC2-206ENST00000549209 DDX10Q13206 875 aaKnown RBP11.27□□□□□ -0.61
SMARCC2-206ENST00000549209 MTHFSDQ2M296 383 aaKnown RBP11.27□□□□□ -0.61
SMARCC2-206ENST00000549209 ATG3Q9NT62 314 aa11.27□□□□□ -0.61
SMARCC2-206ENST00000549209 ASAP1Q9ULH1 1129 aa11.27□□□□□ -0.61
SMARCC2-206ENST00000549209 PALLDQ8WX93 1383 aa11.27□□□□□ -0.61
SMARCC2-206ENST00000549209 LY75O60449 1722 aa11.26□□□□□ -0.61
SMARCC2-206ENST00000549209 CASZ1Q86V15 1759 aa11.26□□□□□ -0.61
SMARCC2-206ENST00000549209 HSP90AB1P08238 724 aaKnown RBP11.26□□□□□ -0.61
SMARCC2-206ENST00000549209 PHACTR3Q96KR7 559 aa11.26□□□□□ -0.61
SMARCC2-206ENST00000549209 SLC4A9Q96Q91 983 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms