RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 A2ML1A8K2U0 1454 aa14.71□□□□□ -0.05
RAPGEF3-219ENST00000549151 BAG4O95429 457 aaKnown RBP14.71□□□□□ -0.05
RAPGEF3-219ENST00000549151 SKOR2Q2VWA4 1001 aaPredicted RBP14.71□□□□□ -0.05
RAPGEF3-219ENST00000549151 CHAMP1Q96JM3 812 aa14.71□□□□□ -0.05
RAPGEF3-219ENST00000549151 G2E3Q7L622 706 aa14.71□□□□□ -0.05
RAPGEF3-219ENST00000549151 RABEP1Q15276 862 aa14.7□□□□□ -0.06
RAPGEF3-219ENST00000549151 CASC1Q6TDU7 716 aa14.7□□□□□ -0.06
RAPGEF3-219ENST00000549151 CPSF1Q10570 1443 aaKnown RBP14.7□□□□□ -0.06
RAPGEF3-219ENST00000549151 CDK12Q9NYV4 1490 aaPredicted RBP14.7□□□□□ -0.06
RAPGEF3-219ENST00000549151 ZGPATQ8N5A5 531 aaKnown RBP14.7□□□□□ -0.06
RAPGEF3-219ENST00000549151 USP26Q9BXU7 913 aa14.7□□□□□ -0.06
RAPGEF3-219ENST00000549151 EXOC6BQ9Y2D4 811 aa14.7□□□□□ -0.06
RAPGEF3-219ENST00000549151 ESPNB1AK53 854 aa14.7□□□□□ -0.06
RAPGEF3-219ENST00000549151 CDC42BPGQ6DT37 1551 aa14.7□□□□□ -0.06
RAPGEF3-219ENST00000549151 ERBB4Q15303 1308 aa14.69□□□□□ -0.06
RAPGEF3-219ENST00000549151 TSPYL4Q9UJ04 414 aa14.69□□□□□ -0.06
RAPGEF3-219ENST00000549151 DLG5Q8TDM6 1919 aa14.69□□□□□ -0.06
RAPGEF3-219ENST00000549151 CAVIN1Q6NZI2 390 aaKnown RBP14.69□□□□□ -0.06
RAPGEF3-219ENST00000549151 RPAP2Q8IXW5 612 aaPredicted RBP14.69□□□□□ -0.06
RAPGEF3-219ENST00000549151 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.69□□□□□ -0.06
RAPGEF3-219ENST00000549151 RTF1Q92541 710 aaKnown RBP14.69□□□□□ -0.06
RAPGEF3-219ENST00000549151 ACEP12821 1306 aa14.69□□□□□ -0.06
RAPGEF3-219ENST00000549151 TSPOAP1O95153 1857 aa14.68□□□□□ -0.06
RAPGEF3-219ENST00000549151 CHL1O00533 1208 aa14.68□□□□□ -0.06
RAPGEF3-219ENST00000549151 CLCN1P35523 988 aa14.68□□□□□ -0.06
RAPGEF3-219ENST00000549151 TTC21BQ7Z4L5 1316 aa14.68□□□□□ -0.06
RAPGEF3-219ENST00000549151 AATKQ6ZMQ8 1374 aa14.67□□□□□ -0.06
RAPGEF3-219ENST00000549151 NASPP49321 788 aaPredicted RBP14.67□□□□□ -0.06
RAPGEF3-219ENST00000549151 FOXD4L6Q3SYB3 417 aaPredicted RBP14.67□□□□□ -0.06
RAPGEF3-219ENST00000549151 FOXD4L3Q6VB84 417 aaPredicted RBP14.67□□□□□ -0.06
RAPGEF3-219ENST00000549151 SLC26A8Q96RN1 970 aa14.67□□□□□ -0.06
RAPGEF3-219ENST00000549151 RTL1A6NKG5 1358 aa14.67□□□□□ -0.06
RAPGEF3-219ENST00000549151 ST18O60284 1047 aa14.67□□□□□ -0.06
RAPGEF3-219ENST00000549151 PRPF40AO75400 957 aaKnown RBP14.66□□□□□ -0.06
RAPGEF3-219ENST00000549151 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF3-219ENST00000549151 TPRNQ4KMQ1 711 aa14.66□□□□□ -0.06
RAPGEF3-219ENST00000549151 NUTM2GQ5VZR2 741 aa14.66□□□□□ -0.06
RAPGEF3-219ENST00000549151 ANP32BQ92688 251 aaKnown RBP14.66□□□□□ -0.06
RAPGEF3-219ENST00000549151 KNDC1Q76NI1 1749 aa14.66□□□□□ -0.06
RAPGEF3-219ENST00000549151 ATP10DQ9P241 1426 aa14.65□□□□□ -0.06
RAPGEF3-219ENST00000549151 RILPL2Q969X0 211 aa14.65□□□□□ -0.06
RAPGEF3-219ENST00000549151 TRIM6-TRIM34B2RNG4 842 aa14.65□□□□□ -0.06
RAPGEF3-219ENST00000549151 HMMRO75330 724 aa14.65□□□□□ -0.06
RAPGEF3-219ENST00000549151 MTHFSDQ2M296 383 aaKnown RBP14.65□□□□□ -0.06
RAPGEF3-219ENST00000549151 NEK4P51957 841 aa14.65□□□□□ -0.06
RAPGEF3-219ENST00000549151 LTV1Q96GA3 475 aaPredicted RBP14.65□□□□□ -0.06
RAPGEF3-219ENST00000549151 REC8O95072 547 aa14.64□□□□□ -0.07
RAPGEF3-219ENST00000549151 PTMSP20962 102 aa14.64□□□□□ -0.07
RAPGEF3-219ENST00000549151 NUCB2P80303 420 aa14.64□□□□□ -0.07
RAPGEF3-219ENST00000549151 FKBP5Q13451 457 aaPredicted RBP14.64□□□□□ -0.07
RAPGEF3-219ENST00000549151 RBM27Q9P2N5 1060 aaKnown RBP14.64□□□□□ -0.07
RAPGEF3-219ENST00000549151 AMPHP49418 695 aa14.64□□□□□ -0.07
RAPGEF3-219ENST00000549151 ISY1Q9ULR0 285 aaKnown RBP14.64□□□□□ -0.07
RAPGEF3-219ENST00000549151 KLHL40Q2TBA0 621 aa14.63□□□□□ -0.07
RAPGEF3-219ENST00000549151 MAP3K19Q56UN5 1328 aa14.63□□□□□ -0.07
RAPGEF3-219ENST00000549151 ERC2O15083 957 aa14.63□□□□□ -0.07
RAPGEF3-219ENST00000549151 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
RAPGEF3-219ENST00000549151 STK31Q9BXU1 1019 aa14.63□□□□□ -0.07
RAPGEF3-219ENST00000549151 ROBO2Q9HCK4 1378 aa14.63□□□□□ -0.07
RAPGEF3-219ENST00000549151 DLC1Q96QB1 1528 aa14.62□□□□□ -0.07
RAPGEF3-219ENST00000549151 RGS12O14924 1447 aa14.62□□□□□ -0.07
RAPGEF3-219ENST00000549151 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
RAPGEF3-219ENST00000549151 PDE1AP54750 535 aa14.62□□□□□ -0.07
RAPGEF3-219ENST00000549151 PTPRCP08575 1304 aa14.62□□□□□ -0.07
RAPGEF3-219ENST00000549151 NGDNQ8NEJ9 315 aaKnown RBP14.62□□□□□ -0.07
RAPGEF3-219ENST00000549151 ANO2Q9NQ90 1003 aa14.62□□□□□ -0.07
RAPGEF3-219ENST00000549151 C14orf37Q86TY3 774 aa14.61□□□□□ -0.07
RAPGEF3-219ENST00000549151 RIMBP3CA6NJZ7 1639 aa14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 RIMBP3BA6NNM3 1639 aa14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 RIMBP3Q9UFD9 1639 aa14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 GNAI2P04899 355 aa14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 LMBRD1Q9NUN5 540 aa14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 ZSCAN23Q3MJ62 389 aa14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 IL1RAPL2Q9NP60 686 aa14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 PNMA6EA0A0J9YXQ4 647 aa14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 MAP4K4O95819 1239 aaPredicted RBP14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 KIF24Q5T7B8 1368 aa14.6□□□□□ -0.07
RAPGEF3-219ENST00000549151 UPF3BQ9BZI7 483 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-219ENST00000549151 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
RAPGEF3-219ENST00000549151 CCT4P50991 539 aaKnown RBP14.58□□□□□ -0.07
RAPGEF3-219ENST00000549151 CEBPAP49715 358 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 CCDC173Q0VFZ6 552 aa14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 EYA1Q99502 592 aa14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 LRRCC1Q9C099 1032 aa14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 PALD1Q9ULE6 856 aa14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 ZDHHC9Q9Y397 364 aa14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 KIAA0232Q92628 1395 aa14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 PRIM1P49642 420 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 FLIIQ13045 1269 aa14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 RNF214Q8ND24 703 aa14.58□□□□□ -0.08
RAPGEF3-219ENST00000549151 TMX3Q96JJ7 454 aa14.57□□□□□ -0.08
RAPGEF3-219ENST00000549151 PPP6R1Q9UPN7 881 aa14.57□□□□□ -0.08
RAPGEF3-219ENST00000549151 LRRFIP2Q9Y608 721 aaKnown RBP14.57□□□□□ -0.08
RAPGEF3-219ENST00000549151 MX1P20591 662 aa14.57□□□□□ -0.08
RAPGEF3-219ENST00000549151 LTKP29376 864 aa14.57□□□□□ -0.08
RAPGEF3-219ENST00000549151 RBSNQ9H1K0 784 aa14.57□□□□□ -0.08
RAPGEF3-219ENST00000549151 NSFL1CQ9UNZ2 370 aaKnown RBP14.57□□□□□ -0.08
RAPGEF3-219ENST00000549151 SYCE3A1L190 88 aa14.56□□□□□ -0.08
RAPGEF3-219ENST00000549151 MSNP26038 577 aaKnown RBP14.56□□□□□ -0.08
RAPGEF3-219ENST00000549151 NLRP6P59044 892 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms