RNA–Protein interactions for RNA: ENST00000548977.5

NR4A1-211, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-211ENST00000548977 U2AF1L5P0DN76 240 aaPredicted RBP12.32□□□□□ -0.44
NR4A1-211ENST00000548977 BAG6P46379 1132 aa12.32□□□□□ -0.44
NR4A1-211ENST00000548977 U2AF1Q01081 240 aaKnown RBP eCLIP12.32□□□□□ -0.44
NR4A1-211ENST00000548977 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
NR4A1-211ENST00000548977 MYBBP1AQ9BQG0 1328 aaKnown RBP12.32□□□□□ -0.44
NR4A1-211ENST00000548977 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
NR4A1-211ENST00000548977 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
NR4A1-211ENST00000548977 MEGF6O75095 1541 aa12.32□□□□□ -0.44
NR4A1-211ENST00000548977 NEFMP07197 916 aa12.31□□□□□ -0.44
NR4A1-211ENST00000548977 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
NR4A1-211ENST00000548977 ACSBG1Q96GR2 724 aa12.31□□□□□ -0.44
NR4A1-211ENST00000548977 BRWD3Q6RI45 1802 aa12.3□□□□□ -0.44
NR4A1-211ENST00000548977 APBA3O96018 575 aa12.3□□□□□ -0.44
NR4A1-211ENST00000548977 AMOTQ4VCS5 1084 aa12.3□□□□□ -0.44
NR4A1-211ENST00000548977 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
NR4A1-211ENST00000548977 PRKRIP1Q9H875 184 aaPredicted RBP12.3□□□□□ -0.44
NR4A1-211ENST00000548977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.44
NR4A1-211ENST00000548977 PARP4Q9UKK3 1724 aaKnown RBP12.3□□□□□ -0.44
NR4A1-211ENST00000548977 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
NR4A1-211ENST00000548977 IFNL2Q8IZJ0 200 aa12.29□□□□□ -0.44
NR4A1-211ENST00000548977 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
NR4A1-211ENST00000548977 DEFB132Q7Z7B7 95 aa12.28□□□□□ -0.44
NR4A1-211ENST00000548977 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
NR4A1-211ENST00000548977 RGPD2P0DJD1 1756 aa12.28□□□□□ -0.44
NR4A1-211ENST00000548977 HSP90AB1P08238 724 aaKnown RBP12.27□□□□□ -0.45
NR4A1-211ENST00000548977 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.45
NR4A1-211ENST00000548977 WDR43Q15061 677 aaKnown RBP eCLIP12.27□□□□□ -0.45
NR4A1-211ENST00000548977 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
NR4A1-211ENST00000548977 CYP27B1O15528 508 aa12.26□□□□□ -0.45
NR4A1-211ENST00000548977 PRKAR2BP31323 418 aa12.26□□□□□ -0.45
NR4A1-211ENST00000548977 EN1Q05925 392 aaPredicted RBP12.26□□□□□ -0.45
NR4A1-211ENST00000548977 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
NR4A1-211ENST00000548977 WNK3Q9BYP7 1800 aa12.25□□□□□ -0.45
NR4A1-211ENST00000548977 KCNQ2O43526 872 aa12.25□□□□□ -0.45
NR4A1-211ENST00000548977 PHKG2P15735 406 aa12.25□□□□□ -0.45
NR4A1-211ENST00000548977 KDRP35968 1356 aa12.25□□□□□ -0.45
NR4A1-211ENST00000548977 BCL9O00512 1426 aa12.24□□□□□ -0.45
NR4A1-211ENST00000548977 FCHSD2O94868 740 aa12.24□□□□□ -0.45
NR4A1-211ENST00000548977 COL3A1P02461 1466 aaPredicted RBP12.24□□□□□ -0.45
NR4A1-211ENST00000548977 MPRIPQ6WCQ1 1025 aa12.24□□□□□ -0.45
NR4A1-211ENST00000548977 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
NR4A1-211ENST00000548977 PLEKHG2Q9H7P9 1386 aa12.23□□□□□ -0.45
NR4A1-211ENST00000548977 MAPK8IP3Q9UPT6 1336 aa12.23□□□□□ -0.45
NR4A1-211ENST00000548977 TMOD3Q9NYL9 352 aa12.23□□□□□ -0.45
NR4A1-211ENST00000548977 CABP4P57796 275 aa12.22□□□□□ -0.45
NR4A1-211ENST00000548977 EZH2Q15910 746 aaKnown RBP12.22□□□□□ -0.45
NR4A1-211ENST00000548977 MTHFSDQ2M296 383 aaKnown RBP12.22□□□□□ -0.45
NR4A1-211ENST00000548977 AKAP4Q5JQC9 854 aa12.22□□□□□ -0.45
NR4A1-211ENST00000548977 PTF1AQ7RTS3 328 aa12.22□□□□□ -0.45
NR4A1-211ENST00000548977 DCAF5Q96JK2 942 aa12.22□□□□□ -0.45
NR4A1-211ENST00000548977 RSPH6AQ9H0K4 717 aa12.22□□□□□ -0.45
NR4A1-211ENST00000548977 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
NR4A1-211ENST00000548977 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
NR4A1-211ENST00000548977 RTF1Q92541 710 aaKnown RBP12.21□□□□□ -0.45
NR4A1-211ENST00000548977 MRS2Q9HD23 443 aa12.21□□□□□ -0.45
NR4A1-211ENST00000548977 PLSCR1O15162 318 aa12.2□□□□□ -0.46
NR4A1-211ENST00000548977 RGPD1P0DJD0 1748 aa12.2□□□□□ -0.46
NR4A1-211ENST00000548977 GNAT3A8MTJ3 354 aa12.19□□□□□ -0.46
NR4A1-211ENST00000548977 ERVV-2B6SEH9 535 aa12.19□□□□□ -0.46
NR4A1-211ENST00000548977 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
NR4A1-211ENST00000548977 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
NR4A1-211ENST00000548977 PHACTR3Q96KR7 559 aa12.19□□□□□ -0.46
NR4A1-211ENST00000548977 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
NR4A1-211ENST00000548977 TEFQ10587 303 aa12.18□□□□□ -0.46
NR4A1-211ENST00000548977 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
NR4A1-211ENST00000548977 PIGBQ92521 554 aa12.18□□□□□ -0.46
NR4A1-211ENST00000548977 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
NR4A1-211ENST00000548977 CCDC146Q8IYE0 955 aa12.17□□□□□ -0.46
NR4A1-211ENST00000548977 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
NR4A1-211ENST00000548977 RNMTO43148 476 aaKnown RBP12.16□□□□□ -0.46
NR4A1-211ENST00000548977 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
NR4A1-211ENST00000548977 DIEXFQ68CQ4 756 aaKnown RBP12.16□□□□□ -0.46
NR4A1-211ENST00000548977 NFATC2IPQ8NCF5 419 aa12.16□□□□□ -0.46
NR4A1-211ENST00000548977 LGR6Q9HBX8 967 aa12.16□□□□□ -0.46
NR4A1-211ENST00000548977 CCNL1Q9UK58 526 aaPredicted RBP12.16□□□□□ -0.46
NR4A1-211ENST00000548977 ADAMTS8Q9UP79 889 aa12.16□□□□□ -0.46
NR4A1-211ENST00000548977 EP400Q96L91 3159 aa12.16□□□□□ -0.46
NR4A1-211ENST00000548977 NFE2L2Q16236 605 aa12.15□□□□□ -0.46
NR4A1-211ENST00000548977 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
NR4A1-211ENST00000548977 RUNDC1Q96C34 613 aa12.15□□□□□ -0.46
NR4A1-211ENST00000548977 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
NR4A1-211ENST00000548977 STK32BQ9NY57 414 aa12.15□□□□□ -0.46
NR4A1-211ENST00000548977 NHSQ6T4R5 1651 aa12.15□□□□□ -0.46
NR4A1-211ENST00000548977 PALLDQ8WX93 1383 aa12.15□□□□□ -0.46
NR4A1-211ENST00000548977 NEUROD2Q15784 382 aa12.14□□□□□ -0.47
NR4A1-211ENST00000548977 SLC52A2Q9HAB3 445 aa12.14□□□□□ -0.47
NR4A1-211ENST00000548977 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
NR4A1-211ENST00000548977 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
NR4A1-211ENST00000548977 SHANK3Q9BYB0 1731 aa12.14□□□□□ -0.47
NR4A1-211ENST00000548977 KDM6AO15550 1401 aaPredicted RBP12.13□□□□□ -0.47
NR4A1-211ENST00000548977 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
NR4A1-211ENST00000548977 KCNQ4P56696 695 aa12.13□□□□□ -0.47
NR4A1-211ENST00000548977 RIPK4P57078 832 aa12.13□□□□□ -0.47
NR4A1-211ENST00000548977 LMOD3Q0VAK6 560 aa12.13□□□□□ -0.47
NR4A1-211ENST00000548977 CCDC184Q52MB2 194 aa12.13□□□□□ -0.47
NR4A1-211ENST00000548977 MCM10Q7L590 875 aa12.13□□□□□ -0.47
NR4A1-211ENST00000548977 TTC5Q8N0Z6 440 aa12.13□□□□□ -0.47
NR4A1-211ENST00000548977 PLEKHF1Q96S99 279 aa12.13□□□□□ -0.47
NR4A1-211ENST00000548977 TNS1Q9HBL0 1735 aaKnown RBP12.13□□□□□ -0.47
NR4A1-211ENST00000548977 LOC102724428A0A0B4J2F2 783 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms