RNA–Protein interactions for RNA: ENST00000548965.1

TMEM106C-210, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-210ENST00000548965 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
TMEM106C-210ENST00000548965 APBA3O96018 575 aa11.73□□□□□ -0.53
TMEM106C-210ENST00000548965 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
TMEM106C-210ENST00000548965 CC2D1BQ5T0F9 858 aaKnown RBP11.73□□□□□ -0.53
TMEM106C-210ENST00000548965 PARD3Q8TEW0 1356 aa11.73□□□□□ -0.53
TMEM106C-210ENST00000548965 RAPGEF4Q8WZA2 1011 aa11.73□□□□□ -0.53
TMEM106C-210ENST00000548965 LY75O60449 1722 aa11.72□□□□□ -0.53
TMEM106C-210ENST00000548965 NPC1L1Q9UHC9 1359 aa11.71□□□□□ -0.53
TMEM106C-210ENST00000548965 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
TMEM106C-210ENST00000548965 EIF4A2Q14240 407 aaKnown RBP11.71□□□□□ -0.53
TMEM106C-210ENST00000548965 EZH2Q15910 746 aaKnown RBP11.71□□□□□ -0.53
TMEM106C-210ENST00000548965 PTF1AQ7RTS3 328 aa11.71□□□□□ -0.53
TMEM106C-210ENST00000548965 DDX54Q8TDD1 881 aaKnown RBP11.71□□□□□ -0.53
TMEM106C-210ENST00000548965 TATP17735 454 aaPredicted RBP11.7□□□□□ -0.54
TMEM106C-210ENST00000548965 ACSBG1Q96GR2 724 aa11.7□□□□□ -0.54
TMEM106C-210ENST00000548965 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
TMEM106C-210ENST00000548965 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
TMEM106C-210ENST00000548965 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
TMEM106C-210ENST00000548965 PAPPAQ13219 1627 aa11.69□□□□□ -0.54
TMEM106C-210ENST00000548965 ZCRB1Q8TBF4 217 aaKnown RBP11.69□□□□□ -0.54
TMEM106C-210ENST00000548965 EYA1Q99502 592 aa11.69□□□□□ -0.54
TMEM106C-210ENST00000548965 BCL11BQ9C0K0 894 aaPredicted RBP11.69□□□□□ -0.54
TMEM106C-210ENST00000548965 LRP5O75197 1615 aa11.68□□□□□ -0.54
TMEM106C-210ENST00000548965 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
TMEM106C-210ENST00000548965 TUBGCP6Q96RT7 1819 aa11.68□□□□□ -0.54
TMEM106C-210ENST00000548965 KCNQ2O43526 872 aa11.68□□□□□ -0.54
TMEM106C-210ENST00000548965 CAMKK2Q96RR4 588 aa11.68□□□□□ -0.54
TMEM106C-210ENST00000548965 C5P01031 1676 aa11.67□□□□□ -0.54
TMEM106C-210ENST00000548965 CASZ1Q86V15 1759 aa11.67□□□□□ -0.54
TMEM106C-210ENST00000548965 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
TMEM106C-210ENST00000548965 TAF1LQ8IZX4 1826 aa11.66□□□□□ -0.54
TMEM106C-210ENST00000548965 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
TMEM106C-210ENST00000548965 MTHFSP49914 203 aa11.66□□□□□ -0.54
TMEM106C-210ENST00000548965 SYTL4Q96C24 671 aaPredicted RBP11.66□□□□□ -0.54
TMEM106C-210ENST00000548965 QSER1Q2KHR3 1735 aa11.66□□□□□ -0.54
TMEM106C-210ENST00000548965 PLEKHG2Q9H7P9 1386 aa11.66□□□□□ -0.54
TMEM106C-210ENST00000548965 KDRP35968 1356 aa11.65□□□□□ -0.55
TMEM106C-210ENST00000548965 CYP27B1O15528 508 aa11.64□□□□□ -0.55
TMEM106C-210ENST00000548965 R3HDM1Q15032 1099 aaKnown RBP11.64□□□□□ -0.55
TMEM106C-210ENST00000548965 AEBP1Q8IUX7 1158 aa11.64□□□□□ -0.55
TMEM106C-210ENST00000548965 PLSCR1O15162 318 aa11.63□□□□□ -0.55
TMEM106C-210ENST00000548965 ZEB1P37275 1124 aaPredicted RBP11.63□□□□□ -0.55
TMEM106C-210ENST00000548965 SPG7Q9UQ90 795 aa11.63□□□□□ -0.55
TMEM106C-210ENST00000548965 IL13P35225 146 aa11.62□□□□□ -0.55
TMEM106C-210ENST00000548965 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
TMEM106C-210ENST00000548965 TXNRD1Q16881 649 aa11.62□□□□□ -0.55
TMEM106C-210ENST00000548965 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
TMEM106C-210ENST00000548965 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
TMEM106C-210ENST00000548965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.61□□□□□ -0.55
TMEM106C-210ENST00000548965 ADAMTS7Q9UKP4 1686 aa11.6□□□□□ -0.55
TMEM106C-210ENST00000548965 DIAPH1O60610 1272 aaKnown RBP11.6□□□□□ -0.55
TMEM106C-210ENST00000548965 HMOX1P09601 288 aa11.6□□□□□ -0.55
TMEM106C-210ENST00000548965 PHKG2P15735 406 aa11.6□□□□□ -0.55
TMEM106C-210ENST00000548965 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
TMEM106C-210ENST00000548965 KDM6AO15550 1401 aaPredicted RBP11.6□□□□□ -0.55
TMEM106C-210ENST00000548965 PPP2R1AP30153 589 aa11.59□□□□□ -0.55
TMEM106C-210ENST00000548965 ZNF530Q6P9A1 599 aaPredicted RBP11.59□□□□□ -0.55
TMEM106C-210ENST00000548965 IFNL2Q8IZJ0 200 aa11.59□□□□□ -0.55
TMEM106C-210ENST00000548965 PROM2Q8N271 834 aa11.59□□□□□ -0.55
TMEM106C-210ENST00000548965 C4BP0C0L5 1744 aa11.59□□□□□ -0.55
TMEM106C-210ENST00000548965 COL5A3P25940 1745 aaPredicted RBP11.59□□□□□ -0.55
TMEM106C-210ENST00000548965 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
TMEM106C-210ENST00000548965 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
TMEM106C-210ENST00000548965 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
TMEM106C-210ENST00000548965 PLEKHO1Q53GL0 409 aaPredicted RBP11.58□□□□□ -0.56
TMEM106C-210ENST00000548965 MPRIPQ6WCQ1 1025 aa11.58□□□□□ -0.56
TMEM106C-210ENST00000548965 CFAP53Q96M91 514 aa11.58□□□□□ -0.56
TMEM106C-210ENST00000548965 SIPA1L3O60292 1781 aaPredicted RBP11.58□□□□□ -0.56
TMEM106C-210ENST00000548965 DLG5Q8TDM6 1919 aa11.58□□□□□ -0.56
TMEM106C-210ENST00000548965 UBR3Q6ZT12 1888 aa11.57□□□□□ -0.56
TMEM106C-210ENST00000548965 ZNF831Q5JPB2 1677 aa11.57□□□□□ -0.56
TMEM106C-210ENST00000548965 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
TMEM106C-210ENST00000548965 AMOTQ4VCS5 1084 aa11.57□□□□□ -0.56
TMEM106C-210ENST00000548965 C1orf141Q5JVX7 400 aa11.57□□□□□ -0.56
TMEM106C-210ENST00000548965 MRC1P22897 1456 aa11.57□□□□□ -0.56
TMEM106C-210ENST00000548965 TJP1Q07157 1748 aa11.56□□□□□ -0.56
TMEM106C-210ENST00000548965 LRRC4BQ9NT99 713 aa11.56□□□□□ -0.56
TMEM106C-210ENST00000548965 STK32BQ9NY57 414 aa11.56□□□□□ -0.56
TMEM106C-210ENST00000548965 TMOD3Q9NYL9 352 aa11.56□□□□□ -0.56
TMEM106C-210ENST00000548965 UBR2Q8IWV8 1755 aa11.56□□□□□ -0.56
TMEM106C-210ENST00000548965 CICQ96RK0 1608 aaPredicted RBP11.56□□□□□ -0.56
TMEM106C-210ENST00000548965 HSP90AB1P08238 724 aaKnown RBP11.55□□□□□ -0.56
TMEM106C-210ENST00000548965 KCNQ4P56696 695 aa11.55□□□□□ -0.56
TMEM106C-210ENST00000548965 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
TMEM106C-210ENST00000548965 CCNL1Q9UK58 526 aaPredicted RBP11.55□□□□□ -0.56
TMEM106C-210ENST00000548965 ZNF827Q17R98 1081 aa11.54□□□□□ -0.56
TMEM106C-210ENST00000548965 PIGBQ92521 554 aa11.54□□□□□ -0.56
TMEM106C-210ENST00000548965 DCAF5Q96JK2 942 aa11.54□□□□□ -0.56
TMEM106C-210ENST00000548965 COL24A1Q17RW2 1714 aa11.53□□□□□ -0.56
TMEM106C-210ENST00000548965 SLC15A2Q16348 729 aa11.53□□□□□ -0.56
TMEM106C-210ENST00000548965 C4AP0C0L4 1744 aa11.52□□□□□ -0.56
TMEM106C-210ENST00000548965 SMARCC1Q92922 1105 aaPredicted RBP11.52□□□□□ -0.57
TMEM106C-210ENST00000548965 PDGFDQ9GZP0 370 aaPredicted RBP11.52□□□□□ -0.57
TMEM106C-210ENST00000548965 NUDCQ9Y266 331 aa11.52□□□□□ -0.57
TMEM106C-210ENST00000548965 MAP3K5Q99683 1374 aa11.52□□□□□ -0.57
TMEM106C-210ENST00000548965 ERVV-2B6SEH9 535 aa11.51□□□□□ -0.57
TMEM106C-210ENST00000548965 U2AF1L5P0DN76 240 aaPredicted RBP11.51□□□□□ -0.57
TMEM106C-210ENST00000548965 PRKAR2BP31323 418 aa11.51□□□□□ -0.57
TMEM106C-210ENST00000548965 CABP4P57796 275 aa11.51□□□□□ -0.57
TMEM106C-210ENST00000548965 U2AF1Q01081 240 aaKnown RBP eCLIP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms