RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 PTMSP20962 102 aa17.45■□□□□ 0.38
RAPGEF3-218ENST00000548919 NCLP19338 710 aaKnown RBP17.45■□□□□ 0.38
RAPGEF3-218ENST00000548919 MLECQ14165 292 aa17.45■□□□□ 0.38
RAPGEF3-218ENST00000548919 KLHL40Q2TBA0 621 aa17.45■□□□□ 0.38
RAPGEF3-218ENST00000548919 SETD1AO15047 1707 aaKnown RBP17.44■□□□□ 0.38
RAPGEF3-218ENST00000548919 NASPP49321 788 aaPredicted RBP17.44■□□□□ 0.38
RAPGEF3-218ENST00000548919 CLEC17AQ6ZS10 378 aa17.44■□□□□ 0.38
RAPGEF3-218ENST00000548919 MIS18AQ9NYP9 233 aa17.44■□□□□ 0.38
RAPGEF3-218ENST00000548919 REREQ9P2R6 1566 aa17.44■□□□□ 0.38
RAPGEF3-218ENST00000548919 EIF4A2Q14240 407 aaKnown RBP17.44■□□□□ 0.38
RAPGEF3-218ENST00000548919 ZGPATQ8N5A5 531 aaKnown RBP17.44■□□□□ 0.38
RAPGEF3-218ENST00000548919 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
RAPGEF3-218ENST00000548919 CHAMP1Q96JM3 812 aa17.43■□□□□ 0.38
RAPGEF3-218ENST00000548919 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
RAPGEF3-218ENST00000548919 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
RAPGEF3-218ENST00000548919 SOX12O15370 315 aa17.42■□□□□ 0.38
RAPGEF3-218ENST00000548919 CAVIN1Q6NZI2 390 aaKnown RBP17.42■□□□□ 0.38
RAPGEF3-218ENST00000548919 RPAP2Q8IXW5 612 aaPredicted RBP17.42■□□□□ 0.38
RAPGEF3-218ENST00000548919 NUTM2FA1L443 756 aa17.41■□□□□ 0.38
RAPGEF3-218ENST00000548919 CHL1O00533 1208 aa17.41■□□□□ 0.38
RAPGEF3-218ENST00000548919 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
RAPGEF3-218ENST00000548919 CYP2E1P05181 493 aaPredicted RBP17.4■□□□□ 0.38
RAPGEF3-218ENST00000548919 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
RAPGEF3-218ENST00000548919 SLC4A10Q6U841 1118 aa17.4■□□□□ 0.38
RAPGEF3-218ENST00000548919 LMBRD1Q9NUN5 540 aa17.4■□□□□ 0.38
RAPGEF3-218ENST00000548919 F6X3S4 739 aa17.4■□□□□ 0.38
RAPGEF3-218ENST00000548919 NUCB2P80303 420 aa17.4■□□□□ 0.38
RAPGEF3-218ENST00000548919 TSHZ3Q63HK5 1081 aa17.4■□□□□ 0.38
RAPGEF3-218ENST00000548919 HSP90AB2PQ58FF8 381 aa17.39■□□□□ 0.37
RAPGEF3-218ENST00000548919 CCDC173Q0VFZ6 552 aa17.39■□□□□ 0.37
RAPGEF3-218ENST00000548919 ZSCAN23Q3MJ62 389 aa17.39■□□□□ 0.37
RAPGEF3-218ENST00000548919 FOXD4L5Q5VV16 416 aaPredicted RBP17.39■□□□□ 0.37
RAPGEF3-218ENST00000548919 CASC1Q6TDU7 716 aa17.39■□□□□ 0.37
RAPGEF3-218ENST00000548919 G2E3Q7L622 706 aa17.39■□□□□ 0.37
RAPGEF3-218ENST00000548919 FOXD4L4Q8WXT5 416 aaPredicted RBP17.39■□□□□ 0.37
RAPGEF3-218ENST00000548919 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
RAPGEF3-218ENST00000548919 PRPF40AO75400 957 aaKnown RBP17.38■□□□□ 0.37
RAPGEF3-218ENST00000548919 RBM27Q9P2N5 1060 aaKnown RBP17.38■□□□□ 0.37
RAPGEF3-218ENST00000548919 ZDHHC9Q9Y397 364 aa17.38■□□□□ 0.37
RAPGEF3-218ENST00000548919 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
RAPGEF3-218ENST00000548919 FOXO3O43524 673 aa17.37■□□□□ 0.37
RAPGEF3-218ENST00000548919 ST18O60284 1047 aa17.37■□□□□ 0.37
RAPGEF3-218ENST00000548919 PPP1R9BQ96SB3 815 aa17.37■□□□□ 0.37
RAPGEF3-218ENST00000548919 C3P01024 1663 aa17.37■□□□□ 0.37
RAPGEF3-218ENST00000548919 PTPRCP08575 1304 aa17.36■□□□□ 0.37
RAPGEF3-218ENST00000548919 IBTKQ9P2D0 1353 aaPredicted RBP17.36■□□□□ 0.37
RAPGEF3-218ENST00000548919 GPT2Q8TD30 523 aa17.35■□□□□ 0.37
RAPGEF3-218ENST00000548919 ANP32BQ92688 251 aaKnown RBP17.35■□□□□ 0.37
RAPGEF3-218ENST00000548919 ERC2O15083 957 aa17.35■□□□□ 0.37
RAPGEF3-218ENST00000548919 REC8O95072 547 aa17.35■□□□□ 0.37
RAPGEF3-218ENST00000548919 RBSNQ9H1K0 784 aa17.35■□□□□ 0.37
RAPGEF3-218ENST00000548919 EXOC6BQ9Y2D4 811 aa17.35■□□□□ 0.37
RAPGEF3-218ENST00000548919 ZNF445P59923 1031 aa17.34■□□□□ 0.37
RAPGEF3-218ENST00000548919 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
RAPGEF3-218ENST00000548919 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
RAPGEF3-218ENST00000548919 ITSN1Q15811 1721 aa17.34■□□□□ 0.37
RAPGEF3-218ENST00000548919 KIAA0232Q92628 1395 aa17.34■□□□□ 0.37
RAPGEF3-218ENST00000548919 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
RAPGEF3-218ENST00000548919 HAP1P54257 671 aaPredicted RBP17.34■□□□□ 0.37
RAPGEF3-218ENST00000548919 PDE1AP54750 535 aa17.34■□□□□ 0.37
RAPGEF3-218ENST00000548919 CWC22Q9HCG8 908 aaKnown RBP17.34■□□□□ 0.37
RAPGEF3-218ENST00000548919 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
RAPGEF3-218ENST00000548919 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
RAPGEF3-218ENST00000548919 NRKQ7Z2Y5 1582 aa17.33■□□□□ 0.36
RAPGEF3-218ENST00000548919 NEK4P51957 841 aa17.33■□□□□ 0.36
RAPGEF3-218ENST00000548919 SPATA31D1Q6ZQQ2 1576 aa17.33■□□□□ 0.36
RAPGEF3-218ENST00000548919 FAM69CQ0P6D2 419 aa17.32■□□□□ 0.36
RAPGEF3-218ENST00000548919 NOL8Q76FK4 1167 aaKnown RBP17.32■□□□□ 0.36
RAPGEF3-218ENST00000548919 ZSCAN30Q86W11 494 aa17.32■□□□□ 0.36
RAPGEF3-218ENST00000548919 CRB1P82279 1406 aa17.32■□□□□ 0.36
RAPGEF3-218ENST00000548919 ACEP12821 1306 aa17.32■□□□□ 0.36
RAPGEF3-218ENST00000548919 HSP90AA2PQ14568 343 aaPredicted RBP17.32■□□□□ 0.36
RAPGEF3-218ENST00000548919 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
RAPGEF3-218ENST00000548919 HMMRO75330 724 aa17.31■□□□□ 0.36
RAPGEF3-218ENST00000548919 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
RAPGEF3-218ENST00000548919 PEAK1Q9H792 1746 aa17.31■□□□□ 0.36
RAPGEF3-218ENST00000548919 TSPOAP1O95153 1857 aa17.31■□□□□ 0.36
RAPGEF3-218ENST00000548919 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
RAPGEF3-218ENST00000548919 MTHFSDQ2M296 383 aaKnown RBP17.3■□□□□ 0.36
RAPGEF3-218ENST00000548919 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
RAPGEF3-218ENST00000548919 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
RAPGEF3-218ENST00000548919 PALD1Q9ULE6 856 aa17.3■□□□□ 0.36
RAPGEF3-218ENST00000548919 ROBO2Q9HCK4 1378 aa17.3■□□□□ 0.36
RAPGEF3-218ENST00000548919 TMX3Q96JJ7 454 aa17.29■□□□□ 0.36
RAPGEF3-218ENST00000548919 TMEM63CQ9P1W3 806 aa17.29■□□□□ 0.36
RAPGEF3-218ENST00000548919 SYCE3A1L190 88 aa17.28■□□□□ 0.36
RAPGEF3-218ENST00000548919 KIAA1211Q6ZU35 1233 aa17.28■□□□□ 0.36
RAPGEF3-218ENST00000548919 MSNP26038 577 aaKnown RBP17.28■□□□□ 0.36
RAPGEF3-218ENST00000548919 OSBPL3Q9H4L5 887 aa17.28■□□□□ 0.36
RAPGEF3-218ENST00000548919 PNMA6EA0A0J9YXQ4 647 aa17.28■□□□□ 0.36
RAPGEF3-218ENST00000548919 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
RAPGEF3-218ENST00000548919 RILPL2Q969X0 211 aa17.28■□□□□ 0.36
RAPGEF3-218ENST00000548919 GNAI2P04899 355 aa17.27■□□□□ 0.36
RAPGEF3-218ENST00000548919 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.36
RAPGEF3-218ENST00000548919 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.36
RAPGEF3-218ENST00000548919 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.36
RAPGEF3-218ENST00000548919 FOXD4L6Q3SYB3 417 aaPredicted RBP17.27■□□□□ 0.35
RAPGEF3-218ENST00000548919 FOXD4L3Q6VB84 417 aaPredicted RBP17.27■□□□□ 0.35
RAPGEF3-218ENST00000548919 ESYT1Q9BSJ8 1104 aa17.27■□□□□ 0.35
RAPGEF3-218ENST00000548919 TRIM6-TRIM34B2RNG4 842 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms