RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 TCEANC2Q96MN5 208 aa17.24■□□□□ 0.35
CACNB3-209ENST00000548860 FERMT3Q86UX7 667 aa17.24■□□□□ 0.35
CACNB3-209ENST00000548860 PLXNC1O60486 1568 aa17.23■□□□□ 0.35
CACNB3-209ENST00000548860 MYL6BP14649 208 aa17.23■□□□□ 0.35
CACNB3-209ENST00000548860 CPA1P15085 419 aa17.23■□□□□ 0.35
CACNB3-209ENST00000548860 AMOTL2Q9Y2J4 779 aa17.23■□□□□ 0.35
CACNB3-209ENST00000548860 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
CACNB3-209ENST00000548860 PPIP5K1Q6PFW1 1433 aa17.23■□□□□ 0.35
CACNB3-209ENST00000548860 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
CACNB3-209ENST00000548860 ZNF518AQ6AHZ1 1483 aa17.23■□□□□ 0.35
CACNB3-209ENST00000548860 YEATS2Q9ULM3 1422 aa17.22■□□□□ 0.35
CACNB3-209ENST00000548860 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
CACNB3-209ENST00000548860 IFIT2P09913 472 aaKnown RBP17.22■□□□□ 0.35
CACNB3-209ENST00000548860 SYNMO15061 1565 aa17.22■□□□□ 0.35
CACNB3-209ENST00000548860 FLIIQ13045 1269 aa17.22■□□□□ 0.35
CACNB3-209ENST00000548860 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
CACNB3-209ENST00000548860 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
CACNB3-209ENST00000548860 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
CACNB3-209ENST00000548860 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
CACNB3-209ENST00000548860 CEP85Q6P2H3 762 aa17.21■□□□□ 0.35
CACNB3-209ENST00000548860 UBE2Q2Q8WVN8 375 aa17.21■□□□□ 0.35
CACNB3-209ENST00000548860 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
CACNB3-209ENST00000548860 MADDQ8WXG6 1647 aa17.2■□□□□ 0.34
CACNB3-209ENST00000548860 ZC3H6P61129 1189 aaKnown RBP17.2■□□□□ 0.34
CACNB3-209ENST00000548860 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
CACNB3-209ENST00000548860 MX1P20591 662 aa17.2■□□□□ 0.34
CACNB3-209ENST00000548860 C1orf141Q5JVX7 400 aa17.19■□□□□ 0.34
CACNB3-209ENST00000548860 SHROOM2Q13796 1616 aa17.19■□□□□ 0.34
CACNB3-209ENST00000548860 IL16Q14005 1332 aa17.19■□□□□ 0.34
CACNB3-209ENST00000548860 GNAI3P08754 354 aa17.19■□□□□ 0.34
CACNB3-209ENST00000548860 SMC3Q9UQE7 1217 aa17.19■□□□□ 0.34
CACNB3-209ENST00000548860 KDM5AP29375 1690 aaKnown RBP17.19■□□□□ 0.34
CACNB3-209ENST00000548860 TTC21BQ7Z4L5 1316 aa17.19■□□□□ 0.34
CACNB3-209ENST00000548860 TRPM2O94759 1503 aa17.18■□□□□ 0.34
CACNB3-209ENST00000548860 ZNF530Q6P9A1 599 aaPredicted RBP17.18■□□□□ 0.34
CACNB3-209ENST00000548860 ANKRD44Q8N8A2 993 aa17.18■□□□□ 0.34
CACNB3-209ENST00000548860 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
CACNB3-209ENST00000548860 PODXL2Q9NZ53 605 aa17.18■□□□□ 0.34
CACNB3-209ENST00000548860 SPC24Q8NBT2 197 aa17.18■□□□□ 0.34
CACNB3-209ENST00000548860 NSD2O96028 1365 aa17.18■□□□□ 0.34
CACNB3-209ENST00000548860 ZNF830Q96NB3 372 aaPredicted RBP17.18■□□□□ 0.34
CACNB3-209ENST00000548860 PNMA6EA0A0J9YXQ4 647 aa17.17■□□□□ 0.34
CACNB3-209ENST00000548860 PDE1AP54750 535 aa17.17■□□□□ 0.34
CACNB3-209ENST00000548860 DCTPP1Q9H773 170 aa17.17■□□□□ 0.34
CACNB3-209ENST00000548860 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-209ENST00000548860 SRCIN1Q9C0H9 1055 aa17.17■□□□□ 0.34
CACNB3-209ENST00000548860 MSH6P52701 1360 aa17.17■□□□□ 0.34
CACNB3-209ENST00000548860 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
CACNB3-209ENST00000548860 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-209ENST00000548860 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
CACNB3-209ENST00000548860 EYA1Q99502 592 aa17.16■□□□□ 0.34
CACNB3-209ENST00000548860 PRIM1P49642 420 aaKnown RBP17.16■□□□□ 0.34
CACNB3-209ENST00000548860 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
CACNB3-209ENST00000548860 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
CACNB3-209ENST00000548860 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
CACNB3-209ENST00000548860 GNAT3A8MTJ3 354 aa17.15■□□□□ 0.34
CACNB3-209ENST00000548860 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
CACNB3-209ENST00000548860 TMX3Q96JJ7 454 aa17.15■□□□□ 0.34
CACNB3-209ENST00000548860 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
CACNB3-209ENST00000548860 RAB3GAP1Q15042 981 aa17.15■□□□□ 0.34
CACNB3-209ENST00000548860 RIC3Q7Z5B4 369 aa17.15■□□□□ 0.34
CACNB3-209ENST00000548860 CCDC83Q8IWF9 413 aa17.15■□□□□ 0.34
CACNB3-209ENST00000548860 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
CACNB3-209ENST00000548860 NEUROD6Q96NK8 337 aa17.14■□□□□ 0.33
CACNB3-209ENST00000548860 USP26Q9BXU7 913 aa17.14■□□□□ 0.33
CACNB3-209ENST00000548860 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
CACNB3-209ENST00000548860 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
CACNB3-209ENST00000548860 CLASRPQ8N2M8 674 aaKnown RBP17.14■□□□□ 0.33
CACNB3-209ENST00000548860 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-209ENST00000548860 CIZ1Q9ULV3 898 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-209ENST00000548860 PTMSP20962 102 aa17.13■□□□□ 0.33
CACNB3-209ENST00000548860 RBM25P49756 843 aaKnown RBP17.13■□□□□ 0.33
CACNB3-209ENST00000548860 SYAP1Q96A49 352 aaPredicted RBP17.13■□□□□ 0.33
CACNB3-209ENST00000548860 BOLA2Q9H3K6 86 aa17.13■□□□□ 0.33
CACNB3-209ENST00000548860 G3BP1Q13283 466 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNB3-209ENST00000548860 JAKMIP1Q96N16 626 aaKnown RBP17.13■□□□□ 0.33
CACNB3-209ENST00000548860 UHRF1BP1LA0JNW5 1464 aa17.13■□□□□ 0.33
CACNB3-209ENST00000548860 CLASP1Q7Z460 1538 aa17.13■□□□□ 0.33
CACNB3-209ENST00000548860 CASTP20810 708 aaKnown RBP17.12■□□□□ 0.33
CACNB3-209ENST00000548860 ZSCAN23Q3MJ62 389 aa17.12■□□□□ 0.33
CACNB3-209ENST00000548860 PRPF40BQ6NWY9 871 aaKnown RBP17.12■□□□□ 0.33
CACNB3-209ENST00000548860 CAMK4Q16566 473 aa17.12■□□□□ 0.33
CACNB3-209ENST00000548860 AACSQ86V21 672 aa17.12■□□□□ 0.33
CACNB3-209ENST00000548860 NECAB1Q8N987 351 aa17.12■□□□□ 0.33
CACNB3-209ENST00000548860 FSD1Q9BTV5 496 aa17.12■□□□□ 0.33
CACNB3-209ENST00000548860 PALD1Q9ULE6 856 aa17.12■□□□□ 0.33
CACNB3-209ENST00000548860 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
CACNB3-209ENST00000548860 ARHGAP45Q92619 1136 aa17.12■□□□□ 0.33
CACNB3-209ENST00000548860 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
CACNB3-209ENST00000548860 STK11IPQ8N1F8 1099 aa17.11■□□□□ 0.33
CACNB3-209ENST00000548860 CHPF2Q9P2E5 772 aa17.11■□□□□ 0.33
CACNB3-209ENST00000548860 RIMS2Q9UQ26 1411 aa17.1■□□□□ 0.33
CACNB3-209ENST00000548860 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
CACNB3-209ENST00000548860 METP08581 1390 aa17.1■□□□□ 0.33
CACNB3-209ENST00000548860 GORABQ5T7V8 394 aa17.1■□□□□ 0.33
CACNB3-209ENST00000548860 GPATCH3Q96I76 525 aa17.1■□□□□ 0.33
CACNB3-209ENST00000548860 KCNQ3O43525 872 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 UNC5CLQ8IV45 518 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 SNX21Q969T3 373 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 DDX11Q96FC9 970 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms