RNA–Protein interactions for RNA: ENST00000548851.5

TSFM-209, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 3 BASIC

Gene TSFM, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-209ENST00000548851 PLEKHG2Q9H7P9 1386 aa13.64□□□□□ -0.23
TSFM-209ENST00000548851 TATP17735 454 aaPredicted RBP13.64□□□□□ -0.23
TSFM-209ENST00000548851 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
TSFM-209ENST00000548851 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
TSFM-209ENST00000548851 USHBP1Q8N6Y0 703 aa13.63□□□□□ -0.23
TSFM-209ENST00000548851 DDX54Q8TDD1 881 aaKnown RBP13.63□□□□□ -0.23
TSFM-209ENST00000548851 EYA1Q99502 592 aa13.63□□□□□ -0.23
TSFM-209ENST00000548851 NHSQ6T4R5 1651 aa13.63□□□□□ -0.23
TSFM-209ENST00000548851 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.23
TSFM-209ENST00000548851 RREB1Q92766 1687 aa13.62□□□□□ -0.23
TSFM-209ENST00000548851 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
TSFM-209ENST00000548851 PTF1AQ7RTS3 328 aa13.61□□□□□ -0.23
TSFM-209ENST00000548851 KAT6BQ8WYB5 2073 aa13.6□□□□□ -0.23
TSFM-209ENST00000548851 KCNQ2O43526 872 aa13.6□□□□□ -0.23
TSFM-209ENST00000548851 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
TSFM-209ENST00000548851 PCDH11XQ9BZA7 1347 aa13.6□□□□□ -0.23
TSFM-209ENST00000548851 PCDH11YQ9BZA8 1340 aa13.6□□□□□ -0.23
TSFM-209ENST00000548851 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
TSFM-209ENST00000548851 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
TSFM-209ENST00000548851 SPG7Q9UQ90 795 aa13.59□□□□□ -0.23
TSFM-209ENST00000548851 ZEB1P37275 1124 aaPredicted RBP13.58□□□□□ -0.24
TSFM-209ENST00000548851 MTHFSP49914 203 aa13.58□□□□□ -0.24
TSFM-209ENST00000548851 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
TSFM-209ENST00000548851 ACSBG1Q96GR2 724 aa13.58□□□□□ -0.24
TSFM-209ENST00000548851 NUP188Q5SRE5 1749 aa13.58□□□□□ -0.24
TSFM-209ENST00000548851 CYP27B1O15528 508 aa13.57□□□□□ -0.24
TSFM-209ENST00000548851 NBPF14Q5TI25 921 aa13.57□□□□□ -0.24
TSFM-209ENST00000548851 PROM2Q8N271 834 aa13.57□□□□□ -0.24
TSFM-209ENST00000548851 BTAF1O14981 1849 aa13.57□□□□□ -0.24
TSFM-209ENST00000548851 IL13P35225 146 aa13.56□□□□□ -0.24
TSFM-209ENST00000548851 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
TSFM-209ENST00000548851 KDRP35968 1356 aa13.56□□□□□ -0.24
TSFM-209ENST00000548851 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
TSFM-209ENST00000548851 TXNRD1Q16881 649 aa13.55□□□□□ -0.24
TSFM-209ENST00000548851 DOT1LQ8TEK3 1739 aa13.55□□□□□ -0.24
TSFM-209ENST00000548851 SRCAPQ6ZRS2 3230 aa13.54□□□□□ -0.24
TSFM-209ENST00000548851 R3HDM1Q15032 1099 aaKnown RBP13.54□□□□□ -0.24
TSFM-209ENST00000548851 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
TSFM-209ENST00000548851 PLEKHO1Q53GL0 409 aaPredicted RBP13.53□□□□□ -0.24
TSFM-209ENST00000548851 IFNL2Q8IZJ0 200 aa13.53□□□□□ -0.24
TSFM-209ENST00000548851 PSDA5PKW4 1024 aaPredicted RBP13.52□□□□□ -0.25
TSFM-209ENST00000548851 DIAPH1O60610 1272 aaKnown RBP13.52□□□□□ -0.25
TSFM-209ENST00000548851 SLC27A3Q5K4L6 730 aa13.52□□□□□ -0.25
TSFM-209ENST00000548851 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.25
TSFM-209ENST00000548851 SYTL4Q96C24 671 aaPredicted RBP13.52□□□□□ -0.25
TSFM-209ENST00000548851 PHKG2P15735 406 aa13.51□□□□□ -0.25
TSFM-209ENST00000548851 HMGB2P26583 209 aaKnown RBP13.51□□□□□ -0.25
TSFM-209ENST00000548851 AEBP1Q8IUX7 1158 aa13.51□□□□□ -0.25
TSFM-209ENST00000548851 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
TSFM-209ENST00000548851 HSP90AB1P08238 724 aaKnown RBP13.5□□□□□ -0.25
TSFM-209ENST00000548851 ITGB4P16144 1822 aa13.49□□□□□ -0.25
TSFM-209ENST00000548851 PPP2R1AP30153 589 aa13.49□□□□□ -0.25
TSFM-209ENST00000548851 CNGB1Q14028 1251 aaPredicted RBP13.49□□□□□ -0.25
TSFM-209ENST00000548851 CFAP53Q96M91 514 aa13.49□□□□□ -0.25
TSFM-209ENST00000548851 LY75O60449 1722 aa13.49□□□□□ -0.25
TSFM-209ENST00000548851 TOGARAM1Q9Y4F4 1720 aa13.49□□□□□ -0.25
TSFM-209ENST00000548851 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
TSFM-209ENST00000548851 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
TSFM-209ENST00000548851 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
TSFM-209ENST00000548851 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
TSFM-209ENST00000548851 ANO8Q9HCE9 1232 aaPredicted RBP13.48□□□□□ -0.25
TSFM-209ENST00000548851 STK32BQ9NY57 414 aa13.48□□□□□ -0.25
TSFM-209ENST00000548851 LRP5O75197 1615 aa13.48□□□□□ -0.25
TSFM-209ENST00000548851 PAPPAQ13219 1627 aa13.47□□□□□ -0.25
TSFM-209ENST00000548851 ERVV-2B6SEH9 535 aa13.47□□□□□ -0.25
TSFM-209ENST00000548851 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
TSFM-209ENST00000548851 PIGBQ92521 554 aa13.47□□□□□ -0.25
TSFM-209ENST00000548851 LRRC4BQ9NT99 713 aa13.47□□□□□ -0.25
TSFM-209ENST00000548851 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
TSFM-209ENST00000548851 TMOD3Q9NYL9 352 aa13.46□□□□□ -0.25
TSFM-209ENST00000548851 HMOX1P09601 288 aa13.45□□□□□ -0.26
TSFM-209ENST00000548851 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
TSFM-209ENST00000548851 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
TSFM-209ENST00000548851 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
TSFM-209ENST00000548851 RALBP1Q15311 655 aa13.44□□□□□ -0.26
TSFM-209ENST00000548851 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
TSFM-209ENST00000548851 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
TSFM-209ENST00000548851 CCNL1Q9UK58 526 aaPredicted RBP13.44□□□□□ -0.26
TSFM-209ENST00000548851 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
TSFM-209ENST00000548851 CASZ1Q86V15 1759 aa13.43□□□□□ -0.26
TSFM-209ENST00000548851 QSER1Q2KHR3 1735 aa13.42□□□□□ -0.26
TSFM-209ENST00000548851 KDM6AO15550 1401 aaPredicted RBP13.42□□□□□ -0.26
TSFM-209ENST00000548851 SPON1Q9HCB6 807 aa13.42□□□□□ -0.26
TSFM-209ENST00000548851 SCN11AQ9UI33 1791 aa13.41□□□□□ -0.26
TSFM-209ENST00000548851 CABP4P57796 275 aa13.41□□□□□ -0.26
TSFM-209ENST00000548851 ZNF827Q17R98 1081 aa13.41□□□□□ -0.26
TSFM-209ENST00000548851 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
TSFM-209ENST00000548851 FCHSD2O94868 740 aa13.4□□□□□ -0.26
TSFM-209ENST00000548851 MTHFSDQ2M296 383 aaKnown RBP13.4□□□□□ -0.26
TSFM-209ENST00000548851 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
TSFM-209ENST00000548851 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
TSFM-209ENST00000548851 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
TSFM-209ENST00000548851 LOC102724428A0A0B4J2F2 783 aa13.39□□□□□ -0.27
TSFM-209ENST00000548851 KCNQ4P56696 695 aa13.39□□□□□ -0.27
TSFM-209ENST00000548851 SIK1P57059 783 aa13.39□□□□□ -0.27
TSFM-209ENST00000548851 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
TSFM-209ENST00000548851 SLC16A10Q8TF71 515 aa13.39□□□□□ -0.27
TSFM-209ENST00000548851 PDGFDQ9GZP0 370 aaPredicted RBP13.39□□□□□ -0.27
TSFM-209ENST00000548851 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
TSFM-209ENST00000548851 TFCP2L1Q9NZI6 479 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms