RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 ARHGEF25Q86VW2 580 aa6.85□□□□□ -1.31
APP-217ENST00000548570 NLRP13Q86W25 1043 aa6.85□□□□□ -1.31
APP-217ENST00000548570 SPOCK2Q92563 424 aa6.85□□□□□ -1.31
APP-217ENST00000548570 PRKRIP1Q9H875 184 aaPredicted RBP6.85□□□□□ -1.31
APP-217ENST00000548570 POLKQ9UBT6 870 aa6.85□□□□□ -1.31
APP-217ENST00000548570 EMILIN1Q9Y6C2 1016 aa6.85□□□□□ -1.31
APP-217ENST00000548570 ITSN1Q15811 1721 aa6.84□□□□□ -1.31
APP-217ENST00000548570 MARF1Q9Y4F3 1742 aaKnown RBP6.84□□□□□ -1.31
APP-217ENST00000548570 NSD2O96028 1365 aa6.84□□□□□ -1.31
APP-217ENST00000548570 AATKQ6ZMQ8 1374 aa6.84□□□□□ -1.31
APP-217ENST00000548570 MAP3K19Q56UN5 1328 aa6.84□□□□□ -1.31
APP-217ENST00000548570 FAM83GA6ND36 823 aa6.84□□□□□ -1.31
APP-217ENST00000548570 PPP2R1AP30153 589 aa6.84□□□□□ -1.31
APP-217ENST00000548570 TNNT2P45379 298 aaPredicted RBP6.84□□□□□ -1.31
APP-217ENST00000548570 COG3Q96JB2 828 aa6.84□□□□□ -1.31
APP-217ENST00000548570 AXIN2Q9Y2T1 843 aa6.84□□□□□ -1.31
APP-217ENST00000548570 CPDO75976 1380 aa6.83□□□□□ -1.32
APP-217ENST00000548570 COL22A1Q8NFW1 1626 aaPredicted RBP6.83□□□□□ -1.32
APP-217ENST00000548570 SOX12O15370 315 aa6.83□□□□□ -1.32
APP-217ENST00000548570 ZC3H6P61129 1189 aaKnown RBP6.83□□□□□ -1.32
APP-217ENST00000548570 MORC1Q86VD1 984 aa6.83□□□□□ -1.32
APP-217ENST00000548570 SMG6Q86US8 1419 aaKnown RBP6.83□□□□□ -1.32
APP-217ENST00000548570 KIAA0232Q92628 1395 aa6.82□□□□□ -1.32
APP-217ENST00000548570 SPATA31A6Q5VVP1 1343 aa6.82□□□□□ -1.32
APP-217ENST00000548570 PHLPP1O60346 1717 aa6.82□□□□□ -1.32
APP-217ENST00000548570 CRYBG1Q9Y4K1 1723 aa6.82□□□□□ -1.32
APP-217ENST00000548570 USP54Q70EL1 1684 aa6.82□□□□□ -1.32
APP-217ENST00000548570 POTEB3A0JP26 581 aa6.82□□□□□ -1.32
APP-217ENST00000548570 NUTM2BA6NNL0 878 aaPredicted RBP6.82□□□□□ -1.32
APP-217ENST00000548570 NUTM2EB1AL46 878 aaPredicted RBP6.82□□□□□ -1.32
APP-217ENST00000548570 CHRNA2Q15822 529 aa6.82□□□□□ -1.32
APP-217ENST00000548570 HSP90AB2PQ58FF8 381 aa6.82□□□□□ -1.32
APP-217ENST00000548570 DIEXFQ68CQ4 756 aaKnown RBP6.82□□□□□ -1.32
APP-217ENST00000548570 DPY19L2Q6NUT2 758 aa6.82□□□□□ -1.32
APP-217ENST00000548570 POTEBQ6S5H4 581 aa6.82□□□□□ -1.32
APP-217ENST00000548570 NUTM2AQ8IVF1 878 aaPredicted RBP6.82□□□□□ -1.32
APP-217ENST00000548570 INSRP06213 1382 aa6.82□□□□□ -1.32
APP-217ENST00000548570 COL3A1P02461 1466 aaPredicted RBP6.81□□□□□ -1.32
APP-217ENST00000548570 ADAMTS2O95450 1211 aa6.81□□□□□ -1.32
APP-217ENST00000548570 HOXB3P14651 431 aaPredicted RBP6.81□□□□□ -1.32
APP-217ENST00000548570 HOXC9P31274 260 aa6.81□□□□□ -1.32
APP-217ENST00000548570 MTHFSP49914 203 aa6.81□□□□□ -1.32
APP-217ENST00000548570 RALBP1Q15311 655 aa6.81□□□□□ -1.32
APP-217ENST00000548570 KCNH5Q8NCM2 988 aa6.81□□□□□ -1.32
APP-217ENST00000548570 RNF166Q96A37 237 aaPredicted RBP6.81□□□□□ -1.32
APP-217ENST00000548570 FNBP4Q8N3X1 1017 aaPredicted RBP6.8□□□□□ -1.32
APP-217ENST00000548570 IP6K1Q92551 441 aa6.8□□□□□ -1.32
APP-217ENST00000548570 ZSWIM6Q9HCJ5 1215 aa6.8□□□□□ -1.32
APP-217ENST00000548570 RGS17Q9UGC6 210 aaPredicted RBP6.8□□□□□ -1.32
APP-217ENST00000548570 CAMTA1Q9Y6Y1 1673 aa6.8□□□□□ -1.32
APP-217ENST00000548570 SLIT2O94813 1529 aa6.8□□□□□ -1.32
APP-217ENST00000548570 PHRF1Q9P1Y6 1649 aaKnown RBP6.79□□□□□ -1.32
APP-217ENST00000548570 BCL9LQ86UU0 1499 aa6.79□□□□□ -1.32
APP-217ENST00000548570 PEAK1Q9H792 1746 aa6.79□□□□□ -1.32
APP-217ENST00000548570 IL13P35225 146 aa6.79□□□□□ -1.32
APP-217ENST00000548570 PTGER2P43116 358 aa6.79□□□□□ -1.32
APP-217ENST00000548570 EIF4A2Q14240 407 aaKnown RBP6.79□□□□□ -1.32
APP-217ENST00000548570 SHPRHQ149N8 1683 aa6.79□□□□□ -1.32
APP-217ENST00000548570 MYBBP1AQ9BQG0 1328 aaKnown RBP6.78□□□□□ -1.32
APP-217ENST00000548570 ANP32CO43423 234 aa6.78□□□□□ -1.32
APP-217ENST00000548570 VARS2Q5ST30 1063 aaKnown RBP6.78□□□□□ -1.32
APP-217ENST00000548570 NBPF6Q5VWK0 638 aa6.78□□□□□ -1.32
APP-217ENST00000548570 NBPF4Q96M43 638 aa6.78□□□□□ -1.32
APP-217ENST00000548570 C8orf37Q96NL8 207 aa6.78□□□□□ -1.32
APP-217ENST00000548570 PRDM11Q9NQV5 511 aa6.78□□□□□ -1.32
APP-217ENST00000548570 BTG4Q9NY30 223 aa6.78□□□□□ -1.32
APP-217ENST00000548570 RTL1A6NKG5 1358 aa6.78□□□□□ -1.32
APP-217ENST00000548570 FLT4P35916 1363 aa6.78□□□□□ -1.32
APP-217ENST00000548570 KIF24Q5T7B8 1368 aa6.78□□□□□ -1.32
APP-217ENST00000548570 ABCA3Q99758 1704 aa6.78□□□□□ -1.32
APP-217ENST00000548570 COL5A2P05997 1499 aaPredicted RBP6.78□□□□□ -1.32
APP-217ENST00000548570 CDK12Q9NYV4 1490 aaPredicted RBP6.78□□□□□ -1.32
APP-217ENST00000548570 LMO7Q8WWI1 1683 aa6.77□□□□□ -1.32
APP-217ENST00000548570 ZBTB7CA1YPR0 619 aa6.77□□□□□ -1.33
APP-217ENST00000548570 PPM1GO15355 546 aaPredicted RBP6.77□□□□□ -1.33
APP-217ENST00000548570 AMPHP49418 695 aa6.77□□□□□ -1.33
APP-217ENST00000548570 LARP1Q6PKG0 1096 aaKnown RBP6.77□□□□□ -1.33
APP-217ENST00000548570 ANKRD24Q8TF21 1146 aa6.77□□□□□ -1.33
APP-217ENST00000548570 DAXXQ9UER7 740 aaPredicted RBP6.77□□□□□ -1.33
APP-217ENST00000548570 COL18A1P39060 1754 aa6.77□□□□□ -1.33
APP-217ENST00000548570 HAP1P54257 671 aaPredicted RBP6.76□□□□□ -1.33
APP-217ENST00000548570 AEBP1Q8IUX7 1158 aa6.76□□□□□ -1.33
APP-217ENST00000548570 PNISRQ8TF01 805 aaKnown RBP6.76□□□□□ -1.33
APP-217ENST00000548570 LTV1Q96GA3 475 aaPredicted RBP6.76□□□□□ -1.33
APP-217ENST00000548570 EYA1Q99502 592 aa6.76□□□□□ -1.33
APP-217ENST00000548570 KIF20BQ96Q89 1820 aa6.76□□□□□ -1.33
APP-217ENST00000548570 BLMP54132 1417 aaPredicted RBP6.76□□□□□ -1.33
APP-217ENST00000548570 NCAPD2Q15021 1401 aa6.76□□□□□ -1.33
APP-217ENST00000548570 AFF2P51816 1311 aa6.76□□□□□ -1.33
APP-217ENST00000548570 IGSF1Q8N6C5 1336 aa6.76□□□□□ -1.33
APP-217ENST00000548570 UNC5CLQ8IV45 518 aa6.75□□□□□ -1.33
APP-217ENST00000548570 USHBP1Q8N6Y0 703 aa6.75□□□□□ -1.33
APP-217ENST00000548570 NGLY1Q96IV0 654 aa6.75□□□□□ -1.33
APP-217ENST00000548570 ANKRD26Q9UPS8 1709 aa6.75□□□□□ -1.33
APP-217ENST00000548570 ABCC6O95255 1503 aa6.75□□□□□ -1.33
APP-217ENST00000548570 ATRNO75882 1429 aa6.75□□□□□ -1.33
APP-217ENST00000548570 WDR17Q8IZU2 1322 aa6.75□□□□□ -1.33
APP-217ENST00000548570 DIAPH1O60610 1272 aaKnown RBP6.74□□□□□ -1.33
APP-217ENST00000548570 VPS72Q15906 364 aa6.74□□□□□ -1.33
APP-217ENST00000548570 POTEAQ6S8J7 498 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms