RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
SLC48A1-206ENST00000548498 SLC16A10Q8TF71 515 aa13.88□□□□□ -0.19
SLC48A1-206ENST00000548498 UBR3Q6ZT12 1888 aa13.88□□□□□ -0.19
SLC48A1-206ENST00000548498 ATP10DQ9P241 1426 aa13.88□□□□□ -0.19
SLC48A1-206ENST00000548498 CLSPNQ9HAW4 1339 aa13.88□□□□□ -0.19
SLC48A1-206ENST00000548498 SLC27A3Q5K4L6 730 aa13.86□□□□□ -0.19
SLC48A1-206ENST00000548498 ANKRD36BQ8N2N9 1353 aa13.85□□□□□ -0.19
SLC48A1-206ENST00000548498 MEGF6O75095 1541 aa13.85□□□□□ -0.19
SLC48A1-206ENST00000548498 TONSLQ96HA7 1378 aa13.84□□□□□ -0.19
SLC48A1-206ENST00000548498 DDX54Q8TDD1 881 aaKnown RBP13.84□□□□□ -0.19
SLC48A1-206ENST00000548498 TFCP2L1Q9NZI6 479 aa13.84□□□□□ -0.19
SLC48A1-206ENST00000548498 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
SLC48A1-206ENST00000548498 C4BP0C0L5 1744 aa13.84□□□□□ -0.19
SLC48A1-206ENST00000548498 ADCY9O60503 1353 aa13.83□□□□□ -0.19
SLC48A1-206ENST00000548498 EDC4Q6P2E9 1401 aaKnown RBP13.83□□□□□ -0.2
SLC48A1-206ENST00000548498 PUS7Q96PZ0 661 aaKnown RBP13.83□□□□□ -0.2
SLC48A1-206ENST00000548498 SYTL4Q96C24 671 aaPredicted RBP13.82□□□□□ -0.2
SLC48A1-206ENST00000548498 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
SLC48A1-206ENST00000548498 KIAA1551Q9HCM1 1747 aa13.81□□□□□ -0.2
SLC48A1-206ENST00000548498 MAP2P11137 1827 aaKnown RBP13.81□□□□□ -0.2
SLC48A1-206ENST00000548498 KIF20BQ96Q89 1820 aa13.81□□□□□ -0.2
SLC48A1-206ENST00000548498 PRIM1P49642 420 aaKnown RBP13.81□□□□□ -0.2
SLC48A1-206ENST00000548498 MSL1Q68DK7 614 aa13.81□□□□□ -0.2
SLC48A1-206ENST00000548498 COL23A1Q86Y22 540 aaPredicted RBP13.8□□□□□ -0.2
SLC48A1-206ENST00000548498 LTV1Q96GA3 475 aaPredicted RBP13.8□□□□□ -0.2
SLC48A1-206ENST00000548498 PKD1L3Q7Z443 1732 aa13.8□□□□□ -0.2
SLC48A1-206ENST00000548498 KIF13BQ9NQT8 1826 aa13.8□□□□□ -0.2
SLC48A1-206ENST00000548498 N4BP2Q86UW6 1770 aaPredicted RBP13.79□□□□□ -0.2
SLC48A1-206ENST00000548498 GRIN3BO60391 1043 aa13.79□□□□□ -0.2
SLC48A1-206ENST00000548498 CARD11Q9BXL7 1154 aa13.79□□□□□ -0.2
SLC48A1-206ENST00000548498 CCNL1Q9UK58 526 aaPredicted RBP13.79□□□□□ -0.2
SLC48A1-206ENST00000548498 CICQ96RK0 1608 aaPredicted RBP13.79□□□□□ -0.2
SLC48A1-206ENST00000548498 MSH5O43196 834 aa13.78□□□□□ -0.2
SLC48A1-206ENST00000548498 IP6K1Q92551 441 aa13.78□□□□□ -0.2
SLC48A1-206ENST00000548498 BRCA1P38398 1863 aaKnown RBP13.78□□□□□ -0.2
SLC48A1-206ENST00000548498 SLC24A1O60721 1099 aa13.77□□□□□ -0.21
SLC48A1-206ENST00000548498 TMC1Q8TDI8 760 aa13.77□□□□□ -0.21
SLC48A1-206ENST00000548498 ZNF526Q8TF50 670 aaPredicted RBP13.77□□□□□ -0.21
SLC48A1-206ENST00000548498 SLC12A5Q9H2X9 1139 aa13.77□□□□□ -0.21
SLC48A1-206ENST00000548498 USP47Q96K76 1375 aa13.76□□□□□ -0.21
SLC48A1-206ENST00000548498 TESK2Q96S53 571 aa13.76□□□□□ -0.21
SLC48A1-206ENST00000548498 GPBP1L1Q9HC44 474 aaPredicted RBP13.76□□□□□ -0.21
SLC48A1-206ENST00000548498 WDR90Q96KV7 1748 aa13.76□□□□□ -0.21
SLC48A1-206ENST00000548498 MAP3K19Q56UN5 1328 aa13.75□□□□□ -0.21
SLC48A1-206ENST00000548498 HSPA6P17066 643 aa13.75□□□□□ -0.21
SLC48A1-206ENST00000548498 HDGFL2Q7Z4V5 671 aaPredicted RBP13.75□□□□□ -0.21
SLC48A1-206ENST00000548498 FBLN1P23142 703 aa13.74□□□□□ -0.21
SLC48A1-206ENST00000548498 HOXC9P31274 260 aa13.74□□□□□ -0.21
SLC48A1-206ENST00000548498 ZCRB1Q8TBF4 217 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-206ENST00000548498 WWC3Q9ULE0 1092 aa13.73□□□□□ -0.21
SLC48A1-206ENST00000548498 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
SLC48A1-206ENST00000548498 AMIGO3Q86WK7 504 aa13.72□□□□□ -0.21
SLC48A1-206ENST00000548498 ANKRD26Q9UPS8 1709 aa13.72□□□□□ -0.21
SLC48A1-206ENST00000548498 PALLDQ8WX93 1383 aa13.71□□□□□ -0.21
SLC48A1-206ENST00000548498 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.21
SLC48A1-206ENST00000548498 USHBP1Q8N6Y0 703 aa13.71□□□□□ -0.21
SLC48A1-206ENST00000548498 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
SLC48A1-206ENST00000548498 ARFGEF1Q9Y6D6 1849 aa13.71□□□□□ -0.22
SLC48A1-206ENST00000548498 RTL1A6NKG5 1358 aa13.71□□□□□ -0.22
SLC48A1-206ENST00000548498 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
SLC48A1-206ENST00000548498 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
SLC48A1-206ENST00000548498 COL5A3P25940 1745 aaPredicted RBP13.7□□□□□ -0.22
SLC48A1-206ENST00000548498 ST20-MTHFSA0A0A6YYL1 179 aa13.69□□□□□ -0.22
SLC48A1-206ENST00000548498 KIF3CO14782 793 aa13.69□□□□□ -0.22
SLC48A1-206ENST00000548498 AMPHP49418 695 aa13.69□□□□□ -0.22
SLC48A1-206ENST00000548498 NBPF6Q5VWK0 638 aa13.69□□□□□ -0.22
SLC48A1-206ENST00000548498 SMIM5Q71RC9 77 aa13.69□□□□□ -0.22
SLC48A1-206ENST00000548498 NBPF4Q96M43 638 aa13.69□□□□□ -0.22
SLC48A1-206ENST00000548498 KCNA4P22459 653 aa13.68□□□□□ -0.22
SLC48A1-206ENST00000548498 COG3Q96JB2 828 aa13.67□□□□□ -0.22
SLC48A1-206ENST00000548498 PCGF6Q9BYE7 350 aa13.67□□□□□ -0.22
SLC48A1-206ENST00000548498 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
SLC48A1-206ENST00000548498 SBF1O95248 1867 aa13.66□□□□□ -0.22
SLC48A1-206ENST00000548498 PHF14O94880 888 aa13.66□□□□□ -0.22
SLC48A1-206ENST00000548498 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
SLC48A1-206ENST00000548498 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
SLC48A1-206ENST00000548498 PXDNLA1KZ92 1463 aa13.66□□□□□ -0.22
SLC48A1-206ENST00000548498 CGNL1Q0VF96 1302 aa13.65□□□□□ -0.22
SLC48A1-206ENST00000548498 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
SLC48A1-206ENST00000548498 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
SLC48A1-206ENST00000548498 MPRIPQ6WCQ1 1025 aa13.65□□□□□ -0.22
SLC48A1-206ENST00000548498 ZNF831Q5JPB2 1677 aa13.65□□□□□ -0.22
SLC48A1-206ENST00000548498 MYH14Q7Z406 1995 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-206ENST00000548498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-206ENST00000548498 CYP27B1O15528 508 aa13.64□□□□□ -0.23
SLC48A1-206ENST00000548498 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
SLC48A1-206ENST00000548498 AK7Q96M32 723 aa13.64□□□□□ -0.23
SLC48A1-206ENST00000548498 NSD3Q9BZ95 1437 aa13.64□□□□□ -0.23
SLC48A1-206ENST00000548498 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-206ENST00000548498 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
SLC48A1-206ENST00000548498 INSRP06213 1382 aa13.62□□□□□ -0.23
SLC48A1-206ENST00000548498 NCAPD2Q15021 1401 aa13.62□□□□□ -0.23
SLC48A1-206ENST00000548498 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
SLC48A1-206ENST00000548498 TMF1P82094 1093 aa13.61□□□□□ -0.23
SLC48A1-206ENST00000548498 HSP90AB2PQ58FF8 381 aa13.61□□□□□ -0.23
SLC48A1-206ENST00000548498 LINC00116Q8NCU8 138 aa13.61□□□□□ -0.23
SLC48A1-206ENST00000548498 GGNBP2Q9H3C7 697 aa13.61□□□□□ -0.23
SLC48A1-206ENST00000548498 FLT4P35916 1363 aa13.6□□□□□ -0.23
SLC48A1-206ENST00000548498 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
SLC48A1-206ENST00000548498 APLP1P51693 650 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms