RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ADH1CP00326 375 aa7.49□□□□□ -1.21
PTCH1-216ENST00000548379 SCTRP47872 440 aa7.49□□□□□ -1.21
PTCH1-216ENST00000548379 DPYDQ12882 1025 aa7.49□□□□□ -1.21
PTCH1-216ENST00000548379 ZNF598Q86UK7 904 aaKnown RBP7.49□□□□□ -1.21
PTCH1-216ENST00000548379 FAM200AQ8TCP9 573 aa7.49□□□□□ -1.21
PTCH1-216ENST00000548379 FSHRP23945 695 aa7.48□□□□□ -1.21
PTCH1-216ENST00000548379 KCNA1Q09470 495 aa7.48□□□□□ -1.21
PTCH1-216ENST00000548379 NR5A1Q13285 461 aa7.48□□□□□ -1.21
PTCH1-216ENST00000548379 CLP1Q92989 425 aaKnown RBP7.48□□□□□ -1.21
PTCH1-216ENST00000548379 PODXL2Q9NZ53 605 aa7.48□□□□□ -1.21
PTCH1-216ENST00000548379 PKD2L1Q9P0L9 805 aa7.48□□□□□ -1.21
PTCH1-216ENST00000548379 V9GY48 417 aaPredicted RBP7.48□□□□□ -1.21
PTCH1-216ENST00000548379 LILRA1O75019 489 aa7.47□□□□□ -1.21
PTCH1-216ENST00000548379 DHX9Q08211 1270 aaKnown RBP7.47□□□□□ -1.21
PTCH1-216ENST00000548379 ARID5BQ14865 1188 aa7.47□□□□□ -1.21
PTCH1-216ENST00000548379 SWI5Q1ZZU3 235 aa7.47□□□□□ -1.21
PTCH1-216ENST00000548379 PHLDB3Q6NSJ2 640 aa7.47□□□□□ -1.21
PTCH1-216ENST00000548379 ZNF594Q96JF6 807 aaPredicted RBP7.47□□□□□ -1.21
PTCH1-216ENST00000548379 PATL2C9JE40 543 aaKnown RBP7.46□□□□□ -1.22
PTCH1-216ENST00000548379 NR3C2P08235 984 aa7.46□□□□□ -1.22
PTCH1-216ENST00000548379 RAB15P59190 212 aa7.46□□□□□ -1.22
PTCH1-216ENST00000548379 ZNF697Q5TEC3 545 aa7.46□□□□□ -1.22
PTCH1-216ENST00000548379 CCDC102BQ68D86 513 aa7.46□□□□□ -1.22
PTCH1-216ENST00000548379 CC2D2BQ6DHV5 1058 aa7.46□□□□□ -1.22
PTCH1-216ENST00000548379 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.22
PTCH1-216ENST00000548379 CCDC116Q8IYX3 515 aa7.46□□□□□ -1.22
PTCH1-216ENST00000548379 OSBPL3Q9H4L5 887 aa7.46□□□□□ -1.22
PTCH1-216ENST00000548379 TMPRSS4Q9NRS4 437 aa7.46□□□□□ -1.22
PTCH1-216ENST00000548379 M0R2N6 131 aa7.45□□□□□ -1.22
PTCH1-216ENST00000548379 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
PTCH1-216ENST00000548379 SSFA2P28290 1259 aa7.45□□□□□ -1.22
PTCH1-216ENST00000548379 SEC13P55735 322 aa7.45□□□□□ -1.22
PTCH1-216ENST00000548379 PPP1R26Q5T8A7 1209 aaPredicted RBP7.45□□□□□ -1.22
PTCH1-216ENST00000548379 TPCN2Q8NHX9 752 aa7.45□□□□□ -1.22
PTCH1-216ENST00000548379 WASLO00401 505 aaPredicted RBP7.44□□□□□ -1.22
PTCH1-216ENST00000548379 GDF9O60383 454 aa7.44□□□□□ -1.22
PTCH1-216ENST00000548379 ZNF784Q8NCA9 323 aaPredicted RBP7.44□□□□□ -1.22
PTCH1-216ENST00000548379 TRIM52Q96A61 297 aa7.44□□□□□ -1.22
PTCH1-216ENST00000548379 PRKD2Q9BZL6 878 aa7.44□□□□□ -1.22
PTCH1-216ENST00000548379 GNEQ9Y223 722 aaKnown RBP7.44□□□□□ -1.22
PTCH1-216ENST00000548379 TMEM229AB2RXF0 380 aa7.43□□□□□ -1.22
PTCH1-216ENST00000548379 SCNN1DP51172 638 aa7.43□□□□□ -1.22
PTCH1-216ENST00000548379 B4GALNT3Q6L9W6 998 aa7.43□□□□□ -1.22
PTCH1-216ENST00000548379 KLF16Q9BXK1 252 aaPredicted RBP7.43□□□□□ -1.22
PTCH1-216ENST00000548379 SFI1A8K8P3 1242 aa7.42□□□□□ -1.22
PTCH1-216ENST00000548379 MYT1Q01538 1121 aa7.42□□□□□ -1.22
PTCH1-216ENST00000548379 OCLNQ16625 522 aa7.42□□□□□ -1.22
PTCH1-216ENST00000548379 C1orf216Q8TAB5 229 aa7.42□□□□□ -1.22
PTCH1-216ENST00000548379 SNIP1Q8TAD8 396 aaKnown RBP7.42□□□□□ -1.22
PTCH1-216ENST00000548379 CYLDQ9NQC7 956 aa7.42□□□□□ -1.22
PTCH1-216ENST00000548379 EMILIN1Q9Y6C2 1016 aa7.42□□□□□ -1.22
PTCH1-216ENST00000548379 ADD1P35611 737 aaKnown RBP7.41□□□□□ -1.22
PTCH1-216ENST00000548379 TRIM67Q6ZTA4 783 aa7.41□□□□□ -1.22
PTCH1-216ENST00000548379 TXNDC2Q86VQ3 553 aa7.41□□□□□ -1.22
PTCH1-216ENST00000548379 TOR4AQ9NXH8 423 aa7.41□□□□□ -1.22
PTCH1-216ENST00000548379 ALDH1A1P00352 501 aa7.4□□□□□ -1.22
PTCH1-216ENST00000548379 PSME1Q06323 249 aa7.4□□□□□ -1.22
PTCH1-216ENST00000548379 NNTQ13423 1086 aa7.4□□□□□ -1.22
PTCH1-216ENST00000548379 CYP2U1Q7Z449 544 aa7.4□□□□□ -1.22
PTCH1-216ENST00000548379 KDF1Q8NAX2 398 aaPredicted RBP7.4□□□□□ -1.22
PTCH1-216ENST00000548379 ZNF358Q9NW07 568 aa7.4□□□□□ -1.22
PTCH1-216ENST00000548379 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.22
PTCH1-216ENST00000548379 GNRH1P01148 92 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 ATP2B4P23634 1241 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 WEE1P30291 646 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 EPHA4P54764 986 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 PRR20EP86478 221 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 PRR20CP86479 221 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 PRR20DP86480 221 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 PRR20BP86481 221 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 PRR20AP86496 221 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 FOXC1Q12948 553 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
PTCH1-216ENST00000548379 SLC4A9Q96Q91 983 aa7.39□□□□□ -1.23
PTCH1-216ENST00000548379 CXXC1Q9P0U4 656 aaPredicted RBP7.39□□□□□ -1.23
PTCH1-216ENST00000548379 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
PTCH1-216ENST00000548379 INHAP05111 366 aa7.38□□□□□ -1.23
PTCH1-216ENST00000548379 GDF10P55107 478 aa7.38□□□□□ -1.23
PTCH1-216ENST00000548379 Q6ZVU0 165 aa7.38□□□□□ -1.23
PTCH1-216ENST00000548379 TAS1R3Q7RTX0 852 aa7.38□□□□□ -1.23
PTCH1-216ENST00000548379 ETNK1Q9HBU6 452 aa7.38□□□□□ -1.23
PTCH1-216ENST00000548379 IVNS1ABPQ9Y6Y0 642 aa7.38□□□□□ -1.23
PTCH1-216ENST00000548379 J3QL48 77 aa7.37□□□□□ -1.23
PTCH1-216ENST00000548379 STAU1O95793 577 aaKnown RBP7.37□□□□□ -1.23
PTCH1-216ENST00000548379 SMPD1P17405 629 aa7.37□□□□□ -1.23
PTCH1-216ENST00000548379 TSEN2Q8NCE0 465 aaKnown RBP7.37□□□□□ -1.23
PTCH1-216ENST00000548379 GZF1Q9H116 711 aaPredicted RBP7.37□□□□□ -1.23
PTCH1-216ENST00000548379 HRH3Q9Y5N1 445 aa7.37□□□□□ -1.23
PTCH1-216ENST00000548379 WASF2Q9Y6W5 498 aa7.37□□□□□ -1.23
PTCH1-216ENST00000548379 ADH1AP07327 375 aa7.36□□□□□ -1.23
PTCH1-216ENST00000548379 ARID4AP29374 1257 aaPredicted RBP7.36□□□□□ -1.23
PTCH1-216ENST00000548379 ITPKCQ96DU7 683 aa7.36□□□□□ -1.23
PTCH1-216ENST00000548379 XAGE2Q96GT9 111 aa7.36□□□□□ -1.23
PTCH1-216ENST00000548379 ESF1Q9H501 851 aaKnown RBP7.36□□□□□ -1.23
PTCH1-216ENST00000548379 BACH1O14867 736 aa7.35□□□□□ -1.23
PTCH1-216ENST00000548379 PRMT3O60678 531 aa7.35□□□□□ -1.23
PTCH1-216ENST00000548379 TIMP2P16035 220 aa7.35□□□□□ -1.23
PTCH1-216ENST00000548379 FOXK2Q01167 660 aa7.35□□□□□ -1.23
PTCH1-216ENST00000548379 MTFR1Q15390 333 aa7.35□□□□□ -1.23
PTCH1-216ENST00000548379 CYP4X1Q8N118 509 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms