RNA–Protein interactions for RNA: ENST00000548021.5

CNOT2-208, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-208ENST00000548021 ESCO1Q5FWF5 840 aa10.91□□□□□ -0.66
CNOT2-208ENST00000548021 ATF7IPQ6VMQ6 1270 aa10.91□□□□□ -0.66
CNOT2-208ENST00000548021 PROSER2Q86WR7 435 aaPredicted RBP10.91□□□□□ -0.66
CNOT2-208ENST00000548021 TSPYL6Q8N831 410 aa10.91□□□□□ -0.66
CNOT2-208ENST00000548021 ORAI2Q96SN7 254 aa10.91□□□□□ -0.66
CNOT2-208ENST00000548021 MSH6P52701 1360 aa10.9□□□□□ -0.66
CNOT2-208ENST00000548021 MED1Q15648 1581 aaPredicted RBP10.9□□□□□ -0.66
CNOT2-208ENST00000548021 C14orf37Q86TY3 774 aa10.9□□□□□ -0.66
CNOT2-208ENST00000548021 MRPL50Q8N5N7 158 aaKnown RBP10.9□□□□□ -0.66
CNOT2-208ENST00000548021 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
CNOT2-208ENST00000548021 PCDHB15Q9Y5E8 787 aa10.9□□□□□ -0.66
CNOT2-208ENST00000548021 NCAPD2Q15021 1401 aa10.9□□□□□ -0.66
CNOT2-208ENST00000548021 NCOA3Q9Y6Q9 1424 aa10.9□□□□□ -0.66
CNOT2-208ENST00000548021 TMEM94Q12767 1356 aa10.9□□□□□ -0.67
CNOT2-208ENST00000548021 USP19O94966 1318 aa10.89□□□□□ -0.67
CNOT2-208ENST00000548021 LMTK3Q96Q04 1460 aa10.89□□□□□ -0.67
CNOT2-208ENST00000548021 PDE4AP27815 886 aa10.89□□□□□ -0.67
CNOT2-208ENST00000548021 MTHFSDQ2M296 383 aaKnown RBP10.89□□□□□ -0.67
CNOT2-208ENST00000548021 FTSJ3Q8IY81 847 aaKnown RBP10.89□□□□□ -0.67
CNOT2-208ENST00000548021 C8orf58Q8NAV2 365 aa10.89□□□□□ -0.67
CNOT2-208ENST00000548021 KIAA0232Q92628 1395 aa10.89□□□□□ -0.67
CNOT2-208ENST00000548021 CHL1O00533 1208 aa10.88□□□□□ -0.67
CNOT2-208ENST00000548021 FOXO3O43524 673 aa10.88□□□□□ -0.67
CNOT2-208ENST00000548021 PSME1Q06323 249 aa10.88□□□□□ -0.67
CNOT2-208ENST00000548021 TWISTNBQ3B726 338 aaPredicted RBP10.88□□□□□ -0.67
CNOT2-208ENST00000548021 MCM10Q7L590 875 aa10.88□□□□□ -0.67
CNOT2-208ENST00000548021 TMEM57Q8N5G2 664 aa10.88□□□□□ -0.67
CNOT2-208ENST00000548021 IP6K1Q92551 441 aa10.88□□□□□ -0.67
CNOT2-208ENST00000548021 BACH2Q9BYV9 841 aa10.88□□□□□ -0.67
CNOT2-208ENST00000548021 COL18A1P39060 1754 aa10.88□□□□□ -0.67
CNOT2-208ENST00000548021 KDM3BQ7LBC6 1761 aa10.88□□□□□ -0.67
CNOT2-208ENST00000548021 N4BP2Q86UW6 1770 aaPredicted RBP10.88□□□□□ -0.67
CNOT2-208ENST00000548021 RGS12O14924 1447 aa10.87□□□□□ -0.67
CNOT2-208ENST00000548021 DDX19BQ9UMR2 479 aa10.87□□□□□ -0.67
CNOT2-208ENST00000548021 IPO8O15397 1037 aaKnown RBP10.86□□□□□ -0.67
CNOT2-208ENST00000548021 XPCQ01831 940 aaPredicted RBP10.86□□□□□ -0.67
CNOT2-208ENST00000548021 ITPRIPQ8IWB1 547 aa10.86□□□□□ -0.67
CNOT2-208ENST00000548021 GAS2L2Q8NHY3 880 aa10.86□□□□□ -0.67
CNOT2-208ENST00000548021 C19orf44Q9H6X5 657 aa10.86□□□□□ -0.67
CNOT2-208ENST00000548021 MAP3K5Q99683 1374 aa10.86□□□□□ -0.67
CNOT2-208ENST00000548021 PXDNQ92626 1479 aa10.86□□□□□ -0.67
CNOT2-208ENST00000548021 ABCC4O15439 1325 aa10.85□□□□□ -0.67
CNOT2-208ENST00000548021 ELL2O00472 640 aaPredicted RBP10.85□□□□□ -0.67
CNOT2-208ENST00000548021 HSPA2P54652 639 aa10.85□□□□□ -0.67
CNOT2-208ENST00000548021 KRT24Q2M2I5 525 aa10.85□□□□□ -0.67
CNOT2-208ENST00000548021 KCNH5Q8NCM2 988 aa10.85□□□□□ -0.67
CNOT2-208ENST00000548021 ARHGAP45Q92619 1136 aa10.85□□□□□ -0.67
CNOT2-208ENST00000548021 LTV1Q96GA3 475 aaPredicted RBP10.85□□□□□ -0.67
CNOT2-208ENST00000548021 ADAMTS7Q9UKP4 1686 aa10.85□□□□□ -0.67
CNOT2-208ENST00000548021 HTATSF1O43719 755 aaKnown RBP10.84□□□□□ -0.67
CNOT2-208ENST00000548021 RGS3P49796 1198 aa10.84□□□□□ -0.67
CNOT2-208ENST00000548021 KRT28Q7Z3Y7 464 aa10.84□□□□□ -0.67
CNOT2-208ENST00000548021 ARHGEF25Q86VW2 580 aa10.84□□□□□ -0.67
CNOT2-208ENST00000548021 USHBP1Q8N6Y0 703 aa10.84□□□□□ -0.67
CNOT2-208ENST00000548021 SIPA1L3O60292 1781 aaPredicted RBP10.84□□□□□ -0.67
CNOT2-208ENST00000548021 ABCA3Q99758 1704 aa10.84□□□□□ -0.67
CNOT2-208ENST00000548021 ABCC6O95255 1503 aa10.84□□□□□ -0.67
CNOT2-208ENST00000548021 CACNA1FO60840 1977 aa10.83□□□□□ -0.68
CNOT2-208ENST00000548021 C8orf34Q49A92 452 aa10.83□□□□□ -0.68
CNOT2-208ENST00000548021 ZBTB40Q9NUA8 1239 aa10.83□□□□□ -0.68
CNOT2-208ENST00000548021 KDM4FA0A1W2PPD8 638 aa10.82□□□□□ -0.68
CNOT2-208ENST00000548021 GCP02774 474 aa10.82□□□□□ -0.68
CNOT2-208ENST00000548021 HDAC1Q13547 482 aaPredicted RBP10.82□□□□□ -0.68
CNOT2-208ENST00000548021 NBPF6Q5VWK0 638 aa10.82□□□□□ -0.68
CNOT2-208ENST00000548021 NBPF4Q96M43 638 aa10.82□□□□□ -0.68
CNOT2-208ENST00000548021 RWDD1Q9H446 243 aaPredicted RBP10.82□□□□□ -0.68
CNOT2-208ENST00000548021 PDZRN3Q9UPQ7 1066 aa10.82□□□□□ -0.68
CNOT2-208ENST00000548021 TNS3Q68CZ2 1445 aa10.82□□□□□ -0.68
CNOT2-208ENST00000548021 CEMIPQ8WUJ3 1361 aa10.81□□□□□ -0.68
CNOT2-208ENST00000548021 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
CNOT2-208ENST00000548021 ATF3P18847 181 aa10.81□□□□□ -0.68
CNOT2-208ENST00000548021 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
CNOT2-208ENST00000548021 RTF1Q92541 710 aaKnown RBP10.81□□□□□ -0.68
CNOT2-208ENST00000548021 API5Q9BZZ5 524 aaKnown RBP10.81□□□□□ -0.68
CNOT2-208ENST00000548021 ZBTB7CA1YPR0 619 aa10.8□□□□□ -0.68
CNOT2-208ENST00000548021 ANP32AP39687 249 aaKnown RBP10.8□□□□□ -0.68
CNOT2-208ENST00000548021 LRRC59Q96AG4 307 aaKnown RBP10.8□□□□□ -0.68
CNOT2-208ENST00000548021 TSPYL4Q9UJ04 414 aa10.8□□□□□ -0.68
CNOT2-208ENST00000548021 PKD1L3Q7Z443 1732 aa10.79□□□□□ -0.68
CNOT2-208ENST00000548021 OVOS2A0A0G2JMS6 1433 aa10.79□□□□□ -0.68
CNOT2-208ENST00000548021 ZBTB7BO15156 539 aaPredicted RBP10.79□□□□□ -0.68
CNOT2-208ENST00000548021 HAP1P54257 671 aaPredicted RBP10.79□□□□□ -0.68
CNOT2-208ENST00000548021 SMC5Q8IY18 1101 aa10.79□□□□□ -0.68
CNOT2-208ENST00000548021 IL17REQ8NFR9 667 aa10.79□□□□□ -0.68
CNOT2-208ENST00000548021 ANKRD24Q8TF21 1146 aa10.79□□□□□ -0.68
CNOT2-208ENST00000548021 DDX17Q92841 729 aaKnown RBP10.79□□□□□ -0.68
CNOT2-208ENST00000548021 MIS18AQ9NYP9 233 aa10.79□□□□□ -0.68
CNOT2-208ENST00000548021 SCN11AQ9UI33 1791 aa10.79□□□□□ -0.68
CNOT2-208ENST00000548021 NHSL1Q5SYE7 1610 aa10.79□□□□□ -0.68
CNOT2-208ENST00000548021 LMOD2Q6P5Q4 547 aa10.78□□□□□ -0.68
CNOT2-208ENST00000548021 CHRDL2Q6WN34 429 aa10.78□□□□□ -0.68
CNOT2-208ENST00000548021 CADPS2Q86UW7 1296 aa10.78□□□□□ -0.68
CNOT2-208ENST00000548021 NPHP3Q7Z494 1330 aa10.78□□□□□ -0.68
CNOT2-208ENST00000548021 ATP10DQ9P241 1426 aa10.77□□□□□ -0.68
CNOT2-208ENST00000548021 POLA2Q14181 598 aa10.77□□□□□ -0.69
CNOT2-208ENST00000548021 NPM2Q86SE8 214 aaKnown RBP10.77□□□□□ -0.69
CNOT2-208ENST00000548021 IPO9Q96P70 1041 aaKnown RBP10.77□□□□□ -0.69
CNOT2-208ENST00000548021 BABAM1Q9NWV8 329 aa10.77□□□□□ -0.69
CNOT2-208ENST00000548021 AXIN2Q9Y2T1 843 aa10.77□□□□□ -0.69
CNOT2-208ENST00000548021 PTPRCP08575 1304 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms