RNA–Protein interactions for RNA: ENST00000547441.1

PRKD1-206, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-206ENST00000547441 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
PRKD1-206ENST00000547441 BTAF1O14981 1849 aa13.72□□□□□ -0.21
PRKD1-206ENST00000547441 SOX12O15370 315 aa13.72□□□□□ -0.21
PRKD1-206ENST00000547441 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
PRKD1-206ENST00000547441 CCER1Q8TC90 406 aaPredicted RBP13.72□□□□□ -0.21
PRKD1-206ENST00000547441 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.21
PRKD1-206ENST00000547441 ACSBG1Q96GR2 724 aa13.7□□□□□ -0.22
PRKD1-206ENST00000547441 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
PRKD1-206ENST00000547441 KAT6BQ8WYB5 2073 aa13.69□□□□□ -0.22
PRKD1-206ENST00000547441 ZNF827Q17R98 1081 aa13.69□□□□□ -0.22
PRKD1-206ENST00000547441 QSER1Q2KHR3 1735 aa13.69□□□□□ -0.22
PRKD1-206ENST00000547441 ERBB3P21860 1342 aa13.68□□□□□ -0.22
PRKD1-206ENST00000547441 MON2Q7Z3U7 1717 aa13.68□□□□□ -0.22
PRKD1-206ENST00000547441 USP54Q70EL1 1684 aa13.68□□□□□ -0.22
PRKD1-206ENST00000547441 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
PRKD1-206ENST00000547441 COL24A1Q17RW2 1714 aa13.67□□□□□ -0.22
PRKD1-206ENST00000547441 GPR162Q16538 588 aa13.67□□□□□ -0.22
PRKD1-206ENST00000547441 LRRC4BQ9NT99 713 aa13.67□□□□□ -0.22
PRKD1-206ENST00000547441 LTN1O94822 1766 aa13.66□□□□□ -0.22
PRKD1-206ENST00000547441 GIGYF1O75420 1035 aaPredicted RBP13.66□□□□□ -0.22
PRKD1-206ENST00000547441 IL2RBP14784 551 aa13.66□□□□□ -0.22
PRKD1-206ENST00000547441 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
PRKD1-206ENST00000547441 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
PRKD1-206ENST00000547441 NLRP2Q9NX02 1062 aa13.66□□□□□ -0.22
PRKD1-206ENST00000547441 USP31Q70CQ4 1352 aa13.66□□□□□ -0.22
PRKD1-206ENST00000547441 ST20-MTHFSA0A0A6YYL1 179 aa13.65□□□□□ -0.22
PRKD1-206ENST00000547441 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
PRKD1-206ENST00000547441 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
PRKD1-206ENST00000547441 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
PRKD1-206ENST00000547441 POLD1P28340 1107 aa13.64□□□□□ -0.23
PRKD1-206ENST00000547441 SLC27A3Q5K4L6 730 aa13.64□□□□□ -0.23
PRKD1-206ENST00000547441 TESK2Q96S53 571 aa13.64□□□□□ -0.23
PRKD1-206ENST00000547441 USP47Q96K76 1375 aa13.63□□□□□ -0.23
PRKD1-206ENST00000547441 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
PRKD1-206ENST00000547441 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
PRKD1-206ENST00000547441 PNPLA7Q6ZV29 1317 aa13.63□□□□□ -0.23
PRKD1-206ENST00000547441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
PRKD1-206ENST00000547441 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
PRKD1-206ENST00000547441 ANKRD24Q8TF21 1146 aa13.62□□□□□ -0.23
PRKD1-206ENST00000547441 TMF1P82094 1093 aa13.61□□□□□ -0.23
PRKD1-206ENST00000547441 CDCA8Q53HL2 280 aa13.61□□□□□ -0.23
PRKD1-206ENST00000547441 NME9Q86XW9 330 aa13.61□□□□□ -0.23
PRKD1-206ENST00000547441 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
PRKD1-206ENST00000547441 FAM208AQ9UK61 1670 aaKnown RBP13.6□□□□□ -0.23
PRKD1-206ENST00000547441 NLGN2Q8NFZ4 835 aa13.6□□□□□ -0.23
PRKD1-206ENST00000547441 TERF2IPQ9NYB0 399 aa13.6□□□□□ -0.23
PRKD1-206ENST00000547441 TFCP2L1Q9NZI6 479 aa13.6□□□□□ -0.23
PRKD1-206ENST00000547441 LY75O60449 1722 aa13.59□□□□□ -0.23
PRKD1-206ENST00000547441 HDGFL2Q7Z4V5 671 aaPredicted RBP13.59□□□□□ -0.23
PRKD1-206ENST00000547441 DOT1LQ8TEK3 1739 aa13.59□□□□□ -0.23
PRKD1-206ENST00000547441 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.24
PRKD1-206ENST00000547441 EDC4Q6P2E9 1401 aaKnown RBP13.57□□□□□ -0.24
PRKD1-206ENST00000547441 GRIN3BO60391 1043 aa13.57□□□□□ -0.24
PRKD1-206ENST00000547441 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
PRKD1-206ENST00000547441 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
PRKD1-206ENST00000547441 NSD2O96028 1365 aa13.57□□□□□ -0.24
PRKD1-206ENST00000547441 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
PRKD1-206ENST00000547441 KCNQ4P56696 695 aa13.56□□□□□ -0.24
PRKD1-206ENST00000547441 SLC12A5Q9H2X9 1139 aa13.56□□□□□ -0.24
PRKD1-206ENST00000547441 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
PRKD1-206ENST00000547441 IP6K1Q92551 441 aa13.55□□□□□ -0.24
PRKD1-206ENST00000547441 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
PRKD1-206ENST00000547441 EIF4G2P78344 907 aaKnown RBP eCLIP13.54□□□□□ -0.24
PRKD1-206ENST00000547441 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
PRKD1-206ENST00000547441 CCNL1Q9UK58 526 aaPredicted RBP13.53□□□□□ -0.24
PRKD1-206ENST00000547441 A0A1W2PP64 1363 aa13.53□□□□□ -0.24
PRKD1-206ENST00000547441 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
PRKD1-206ENST00000547441 MEGF6O75095 1541 aa13.51□□□□□ -0.25
PRKD1-206ENST00000547441 COL23A1Q86Y22 540 aaPredicted RBP13.51□□□□□ -0.25
PRKD1-206ENST00000547441 RGPD2P0DJD1 1756 aa13.5□□□□□ -0.25
PRKD1-206ENST00000547441 C5P01031 1676 aa13.5□□□□□ -0.25
PRKD1-206ENST00000547441 ADCY9O60503 1353 aa13.5□□□□□ -0.25
PRKD1-206ENST00000547441 MSL1Q68DK7 614 aa13.5□□□□□ -0.25
PRKD1-206ENST00000547441 ZCRB1Q8TBF4 217 aaKnown RBP13.5□□□□□ -0.25
PRKD1-206ENST00000547441 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
PRKD1-206ENST00000547441 HOXC9P31274 260 aa13.49□□□□□ -0.25
PRKD1-206ENST00000547441 GPBP1L1Q9HC44 474 aaPredicted RBP13.49□□□□□ -0.25
PRKD1-206ENST00000547441 CD2APQ9Y5K6 639 aa13.49□□□□□ -0.25
PRKD1-206ENST00000547441 HSPA5P11021 654 aaKnown RBP13.47□□□□□ -0.25
PRKD1-206ENST00000547441 HSPA6P17066 643 aa13.47□□□□□ -0.25
PRKD1-206ENST00000547441 TAF1LQ8IZX4 1826 aa13.47□□□□□ -0.25
PRKD1-206ENST00000547441 RTL1A6NKG5 1358 aa13.46□□□□□ -0.25
PRKD1-206ENST00000547441 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.25
PRKD1-206ENST00000547441 AMPHP49418 695 aa13.46□□□□□ -0.25
PRKD1-206ENST00000547441 FLAD1Q8NFF5 587 aa13.46□□□□□ -0.25
PRKD1-206ENST00000547441 COG3Q96JB2 828 aa13.46□□□□□ -0.25
PRKD1-206ENST00000547441 HMGB2P26583 209 aaKnown RBP13.45□□□□□ -0.26
PRKD1-206ENST00000547441 ZNF526Q8TF50 670 aaPredicted RBP13.44□□□□□ -0.26
PRKD1-206ENST00000547441 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
PRKD1-206ENST00000547441 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
PRKD1-206ENST00000547441 FBLN1P23142 703 aa13.43□□□□□ -0.26
PRKD1-206ENST00000547441 NBPF6Q5VWK0 638 aa13.43□□□□□ -0.26
PRKD1-206ENST00000547441 PLCD3Q8N3E9 789 aa13.43□□□□□ -0.26
PRKD1-206ENST00000547441 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
PRKD1-206ENST00000547441 SPOCK2Q92563 424 aa13.43□□□□□ -0.26
PRKD1-206ENST00000547441 NBPF4Q96M43 638 aa13.43□□□□□ -0.26
PRKD1-206ENST00000547441 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
PRKD1-206ENST00000547441 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
PRKD1-206ENST00000547441 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
PRKD1-206ENST00000547441 FYB1O15117 783 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms