RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 AKAP4Q5JQC9 854 aa14.35□□□□□ -0.11
LINC00485-201ENST00000547179 PLEKHG2Q9H7P9 1386 aa14.35□□□□□ -0.11
LINC00485-201ENST00000547179 TEFQ10587 303 aa14.35□□□□□ -0.11
LINC00485-201ENST00000547179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC00485-201ENST00000547179 RGPD1P0DJD0 1748 aa14.34□□□□□ -0.11
LINC00485-201ENST00000547179 NUTM2BA6NNL0 878 aaPredicted RBP14.33□□□□□ -0.12
LINC00485-201ENST00000547179 NUTM2EB1AL46 878 aaPredicted RBP14.33□□□□□ -0.12
LINC00485-201ENST00000547179 EXOSC9Q06265 439 aaKnown RBP14.33□□□□□ -0.12
LINC00485-201ENST00000547179 NUTM2AQ8IVF1 878 aaPredicted RBP14.33□□□□□ -0.12
LINC00485-201ENST00000547179 SPINK5Q9NQ38 1064 aaPredicted RBP14.33□□□□□ -0.12
LINC00485-201ENST00000547179 BABAM1Q9NWV8 329 aa14.33□□□□□ -0.12
LINC00485-201ENST00000547179 MCM10Q7L590 875 aa14.32□□□□□ -0.12
LINC00485-201ENST00000547179 TSR2Q969E8 191 aaKnown RBP14.32□□□□□ -0.12
LINC00485-201ENST00000547179 PHLPP1O60346 1717 aa14.32□□□□□ -0.12
LINC00485-201ENST00000547179 THUMPD2Q9BTF0 503 aaKnown RBP14.32□□□□□ -0.12
LINC00485-201ENST00000547179 CARD10Q9BWT7 1032 aa14.32□□□□□ -0.12
LINC00485-201ENST00000547179 TSPYL4Q9UJ04 414 aa14.32□□□□□ -0.12
LINC00485-201ENST00000547179 BTG4Q9NY30 223 aa14.32□□□□□ -0.12
LINC00485-201ENST00000547179 JCADQ9P266 1359 aa14.32□□□□□ -0.12
LINC00485-201ENST00000547179 FAM83GA6ND36 823 aa14.31□□□□□ -0.12
LINC00485-201ENST00000547179 IPO8O15397 1037 aaKnown RBP14.31□□□□□ -0.12
LINC00485-201ENST00000547179 ADAMTS2O95450 1211 aa14.31□□□□□ -0.12
LINC00485-201ENST00000547179 DCTN1Q14203 1278 aa14.31□□□□□ -0.12
LINC00485-201ENST00000547179 TAF7Q15545 349 aaPredicted RBP14.31□□□□□ -0.12
LINC00485-201ENST00000547179 IFNL2Q8IZJ0 200 aa14.31□□□□□ -0.12
LINC00485-201ENST00000547179 FAM208AQ9UK61 1670 aaKnown RBP14.31□□□□□ -0.12
LINC00485-201ENST00000547179 IRX6P78412 446 aaPredicted RBP14.3□□□□□ -0.12
LINC00485-201ENST00000547179 IL2RBP14784 551 aa14.3□□□□□ -0.12
LINC00485-201ENST00000547179 SMC4Q9NTJ3 1288 aa14.3□□□□□ -0.12
LINC00485-201ENST00000547179 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
LINC00485-201ENST00000547179 NCAPD2Q15021 1401 aa14.29□□□□□ -0.12
LINC00485-201ENST00000547179 MBIPQ9NS73 344 aa14.29□□□□□ -0.12
LINC00485-201ENST00000547179 PPP4R2Q9NY27 417 aa14.29□□□□□ -0.12
LINC00485-201ENST00000547179 ZNF853P0CG23 659 aa14.28□□□□□ -0.12
LINC00485-201ENST00000547179 ALDH1L2Q3SY69 923 aa14.28□□□□□ -0.12
LINC00485-201ENST00000547179 CHL1O00533 1208 aa14.28□□□□□ -0.12
LINC00485-201ENST00000547179 FRAT1Q92837 279 aaPredicted RBP14.28□□□□□ -0.12
LINC00485-201ENST00000547179 CDCA7Q9BWT1 371 aaPredicted RBP14.28□□□□□ -0.12
LINC00485-201ENST00000547179 CCDC9Q9Y3X0 531 aaKnown RBP14.28□□□□□ -0.12
LINC00485-201ENST00000547179 KIF16BQ96L93 1317 aa14.28□□□□□ -0.12
LINC00485-201ENST00000547179 TWISTNBQ3B726 338 aaPredicted RBP14.28□□□□□ -0.12
LINC00485-201ENST00000547179 MEX3CQ5U5Q3 659 aaKnown RBP14.28□□□□□ -0.12
LINC00485-201ENST00000547179 ZCRB1Q8TBF4 217 aaKnown RBP14.28□□□□□ -0.12
LINC00485-201ENST00000547179 RARSP54136 660 aaKnown RBP14.27□□□□□ -0.12
LINC00485-201ENST00000547179 SPATA31A6Q5VVP1 1343 aa14.27□□□□□ -0.12
LINC00485-201ENST00000547179 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.13
LINC00485-201ENST00000547179 COL5A2P05997 1499 aaPredicted RBP14.27□□□□□ -0.13
LINC00485-201ENST00000547179 CRB1P82279 1406 aa14.27□□□□□ -0.13
LINC00485-201ENST00000547179 PCDH11XQ9BZA7 1347 aa14.26□□□□□ -0.13
LINC00485-201ENST00000547179 PCDH11YQ9BZA8 1340 aa14.26□□□□□ -0.13
LINC00485-201ENST00000547179 CRYBG1Q9Y4K1 1723 aa14.26□□□□□ -0.13
LINC00485-201ENST00000547179 ZKSCAN2Q63HK3 967 aa14.26□□□□□ -0.13
LINC00485-201ENST00000547179 LARP1Q6PKG0 1096 aaKnown RBP14.26□□□□□ -0.13
LINC00485-201ENST00000547179 FTSJ3Q8IY81 847 aaKnown RBP14.26□□□□□ -0.13
LINC00485-201ENST00000547179 NGLY1Q96IV0 654 aa14.26□□□□□ -0.13
LINC00485-201ENST00000547179 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
LINC00485-201ENST00000547179 CHMP4BQ9H444 224 aaKnown RBP14.26□□□□□ -0.13
LINC00485-201ENST00000547179 USP35Q9P2H5 1018 aa14.26□□□□□ -0.13
LINC00485-201ENST00000547179 COL14A1Q05707 1796 aaKnown RBP14.26□□□□□ -0.13
LINC00485-201ENST00000547179 COL22A1Q8NFW1 1626 aaPredicted RBP14.26□□□□□ -0.13
LINC00485-201ENST00000547179 MPRIPQ6WCQ1 1025 aa14.25□□□□□ -0.13
LINC00485-201ENST00000547179 STK31Q9BXU1 1019 aa14.25□□□□□ -0.13
LINC00485-201ENST00000547179 CAMTA1Q9Y6Y1 1673 aa14.25□□□□□ -0.13
LINC00485-201ENST00000547179 COL18A1P39060 1754 aa14.25□□□□□ -0.13
LINC00485-201ENST00000547179 COL16A1Q07092 1604 aaPredicted RBP14.25□□□□□ -0.13
LINC00485-201ENST00000547179 PDE3AQ14432 1141 aa14.25□□□□□ -0.13
LINC00485-201ENST00000547179 DCAF5Q96JK2 942 aa14.25□□□□□ -0.13
LINC00485-201ENST00000547179 IL17REQ8NFR9 667 aa14.24□□□□□ -0.13
LINC00485-201ENST00000547179 BTBD11A6QL63 1104 aa14.24□□□□□ -0.13
LINC00485-201ENST00000547179 ELL2O00472 640 aaPredicted RBP14.24□□□□□ -0.13
LINC00485-201ENST00000547179 OVOS2A0A0G2JMS6 1433 aa14.23□□□□□ -0.13
LINC00485-201ENST00000547179 BCAR3O75815 825 aa14.23□□□□□ -0.13
LINC00485-201ENST00000547179 RGPD5Q99666 1765 aa14.23□□□□□ -0.13
LINC00485-201ENST00000547179 PHKG2P15735 406 aa14.23□□□□□ -0.13
LINC00485-201ENST00000547179 THRAP3Q9Y2W1 955 aaKnown RBP14.23□□□□□ -0.13
LINC00485-201ENST00000547179 DLG5Q8TDM6 1919 aa14.23□□□□□ -0.13
LINC00485-201ENST00000547179 ABCA3Q99758 1704 aa14.23□□□□□ -0.13
LINC00485-201ENST00000547179 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
LINC00485-201ENST00000547179 PLIN1O60240 522 aa14.22□□□□□ -0.13
LINC00485-201ENST00000547179 CABP4P57796 275 aa14.22□□□□□ -0.13
LINC00485-201ENST00000547179 AAMPQ13685 434 aa14.22□□□□□ -0.13
LINC00485-201ENST00000547179 TTC5Q8N0Z6 440 aa14.22□□□□□ -0.13
LINC00485-201ENST00000547179 EXOC5O00471 708 aa14.22□□□□□ -0.13
LINC00485-201ENST00000547179 LMO7Q8WWI1 1683 aa14.22□□□□□ -0.13
LINC00485-201ENST00000547179 BCL2L13Q9BXK5 485 aa14.22□□□□□ -0.13
LINC00485-201ENST00000547179 VAMP4O75379 141 aa14.21□□□□□ -0.13
LINC00485-201ENST00000547179 CCDC30Q5VVM6 783 aa14.21□□□□□ -0.13
LINC00485-201ENST00000547179 SSH1Q8WYL5 1049 aa14.21□□□□□ -0.13
LINC00485-201ENST00000547179 API5Q9BZZ5 524 aaKnown RBP14.21□□□□□ -0.13
LINC00485-201ENST00000547179 DDX54Q8TDD1 881 aaKnown RBP14.21□□□□□ -0.13
LINC00485-201ENST00000547179 C8orf37Q96NL8 207 aa14.21□□□□□ -0.13
LINC00485-201ENST00000547179 LGR6Q9HBX8 967 aa14.2□□□□□ -0.14
LINC00485-201ENST00000547179 MIS18AQ9NYP9 233 aa14.2□□□□□ -0.14
LINC00485-201ENST00000547179 RGPD2P0DJD1 1756 aa14.2□□□□□ -0.14
LINC00485-201ENST00000547179 CEMIPQ8WUJ3 1361 aa14.2□□□□□ -0.14
LINC00485-201ENST00000547179 DZIP1LQ8IYY4 767 aaKnown RBP14.19□□□□□ -0.14
LINC00485-201ENST00000547179 C8orf58Q8NAV2 365 aa14.19□□□□□ -0.14
LINC00485-201ENST00000547179 MEGF6O75095 1541 aa14.19□□□□□ -0.14
LINC00485-201ENST00000547179 HOXB7P09629 217 aa14.19□□□□□ -0.14
LINC00485-201ENST00000547179 UNC5CLQ8IV45 518 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms