RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SIRT2Q8IXJ6 389 aa15.94■□□□□ 0.14
SCAF11-209ENST00000547018 SETD1AO15047 1707 aaKnown RBP15.94■□□□□ 0.14
SCAF11-209ENST00000547018 OTUD7AQ8TE49 926 aaPredicted RBP15.94■□□□□ 0.14
SCAF11-209ENST00000547018 RGPD8O14715 1765 aaPredicted RBP15.94■□□□□ 0.14
SCAF11-209ENST00000547018 KCNQ3O43525 872 aa15.93■□□□□ 0.14
SCAF11-209ENST00000547018 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
SCAF11-209ENST00000547018 C3P01024 1663 aa15.93■□□□□ 0.14
SCAF11-209ENST00000547018 GAS2L2Q8NHY3 880 aa15.93■□□□□ 0.14
SCAF11-209ENST00000547018 NLRP2Q9NX02 1062 aa15.93■□□□□ 0.14
SCAF11-209ENST00000547018 ZNF530Q6P9A1 599 aaPredicted RBP15.92■□□□□ 0.14
SCAF11-209ENST00000547018 ADGRB2O60241 1585 aa15.92■□□□□ 0.14
SCAF11-209ENST00000547018 TEFQ10587 303 aa15.92■□□□□ 0.14
SCAF11-209ENST00000547018 FRAT2O75474 233 aaPredicted RBP15.91■□□□□ 0.14
SCAF11-209ENST00000547018 HDAC1Q13547 482 aaPredicted RBP15.91■□□□□ 0.14
SCAF11-209ENST00000547018 KRT28Q7Z3Y7 464 aa15.91■□□□□ 0.14
SCAF11-209ENST00000547018 EXOC6BQ9Y2D4 811 aa15.91■□□□□ 0.14
SCAF11-209ENST00000547018 FER1L4A9Z1Z3 1794 aa15.91■□□□□ 0.14
SCAF11-209ENST00000547018 OVOS2A0A0J9YW53 1432 aa15.91■□□□□ 0.14
SCAF11-209ENST00000547018 OVOS2Q6IE36 1432 aa15.91■□□□□ 0.14
SCAF11-209ENST00000547018 GCP02774 474 aa15.91■□□□□ 0.14
SCAF11-209ENST00000547018 SBNO1A3KN83 1393 aa15.91■□□□□ 0.14
SCAF11-209ENST00000547018 SMC5Q8IY18 1101 aa15.9■□□□□ 0.14
SCAF11-209ENST00000547018 C22orf23Q9BZE7 217 aa15.9■□□□□ 0.14
SCAF11-209ENST00000547018 USP19O94966 1318 aa15.9■□□□□ 0.14
SCAF11-209ENST00000547018 ATF3P18847 181 aa15.9■□□□□ 0.14
SCAF11-209ENST00000547018 PHAXQ9H814 394 aaKnown RBP15.9■□□□□ 0.14
SCAF11-209ENST00000547018 HAP1P54257 671 aaPredicted RBP15.9■□□□□ 0.14
SCAF11-209ENST00000547018 NFKBIBQ15653 356 aa15.9■□□□□ 0.14
SCAF11-209ENST00000547018 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
SCAF11-209ENST00000547018 PIP4K2AP48426 406 aaPredicted RBP15.89■□□□□ 0.13
SCAF11-209ENST00000547018 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
SCAF11-209ENST00000547018 NUCB1Q02818 461 aa15.88■□□□□ 0.13
SCAF11-209ENST00000547018 BECN1Q14457 450 aa15.88■□□□□ 0.13
SCAF11-209ENST00000547018 AXIN2Q9Y2T1 843 aa15.88■□□□□ 0.13
SCAF11-209ENST00000547018 ITSN1Q15811 1721 aa15.88■□□□□ 0.13
SCAF11-209ENST00000547018 DIP2AQ14689 1571 aa15.87■□□□□ 0.13
SCAF11-209ENST00000547018 HSP90AA1P07900 732 aaKnown RBP15.87■□□□□ 0.13
SCAF11-209ENST00000547018 AAMPQ13685 434 aa15.87■□□□□ 0.13
SCAF11-209ENST00000547018 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
SCAF11-209ENST00000547018 RIMS1Q86UR5 1692 aaKnown RBP15.87■□□□□ 0.13
SCAF11-209ENST00000547018 MSH6P52701 1360 aa15.87■□□□□ 0.13
SCAF11-209ENST00000547018 FLIIQ13045 1269 aa15.86■□□□□ 0.13
SCAF11-209ENST00000547018 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
SCAF11-209ENST00000547018 ANKRD26Q9UPS8 1709 aa15.86■□□□□ 0.13
SCAF11-209ENST00000547018 IGSF1Q8N6C5 1336 aa15.86■□□□□ 0.13
SCAF11-209ENST00000547018 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
SCAF11-209ENST00000547018 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
SCAF11-209ENST00000547018 ANKRD24Q8TF21 1146 aa15.86■□□□□ 0.13
SCAF11-209ENST00000547018 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
SCAF11-209ENST00000547018 CEP170BQ9Y4F5 1589 aaPredicted RBP15.86■□□□□ 0.13
SCAF11-209ENST00000547018 PRAMEF22A3QJZ6 481 aa15.85■□□□□ 0.13
SCAF11-209ENST00000547018 A0A0G2JS52 829 aa15.85■□□□□ 0.13
SCAF11-209ENST00000547018 IP6K1Q92551 441 aa15.85■□□□□ 0.13
SCAF11-209ENST00000547018 ARHGAP45Q92619 1136 aa15.85■□□□□ 0.13
SCAF11-209ENST00000547018 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
SCAF11-209ENST00000547018 KAT6BQ8WYB5 2073 aa15.84■□□□□ 0.13
SCAF11-209ENST00000547018 ABCC4O15439 1325 aa15.84■□□□□ 0.13
SCAF11-209ENST00000547018 TBC1D2Q9BYX2 928 aa15.84■□□□□ 0.13
SCAF11-209ENST00000547018 IL1RAPL2Q9NP60 686 aa15.84■□□□□ 0.13
SCAF11-209ENST00000547018 BTBD11A6QL63 1104 aa15.84■□□□□ 0.13
SCAF11-209ENST00000547018 CCDC30Q5VVM6 783 aa15.84■□□□□ 0.13
SCAF11-209ENST00000547018 USP31Q70CQ4 1352 aa15.83■□□□□ 0.13
SCAF11-209ENST00000547018 CHMP4BQ9H444 224 aaKnown RBP15.83■□□□□ 0.13
SCAF11-209ENST00000547018 PIK3R4Q99570 1358 aa15.83■□□□□ 0.12
SCAF11-209ENST00000547018 TBC1D32Q96NH3 1257 aa15.83■□□□□ 0.12
SCAF11-209ENST00000547018 DLG5Q8TDM6 1919 aa15.83■□□□□ 0.12
SCAF11-209ENST00000547018 CHPF2Q9P2E5 772 aa15.83■□□□□ 0.12
SCAF11-209ENST00000547018 MAP4K4O95819 1239 aaPredicted RBP15.82■□□□□ 0.12
SCAF11-209ENST00000547018 JARID2Q92833 1246 aaPredicted RBP15.82■□□□□ 0.12
SCAF11-209ENST00000547018 CEP85Q6P2H3 762 aa15.82■□□□□ 0.12
SCAF11-209ENST00000547018 GCC1Q96CN9 775 aa15.82■□□□□ 0.12
SCAF11-209ENST00000547018 LRRFIP2Q9Y608 721 aaKnown RBP15.82■□□□□ 0.12
SCAF11-209ENST00000547018 ARHGAP23Q9P227 1491 aa15.82■□□□□ 0.12
SCAF11-209ENST00000547018 GZF1Q9H116 711 aaPredicted RBP15.81■□□□□ 0.12
SCAF11-209ENST00000547018 MYL6BP14649 208 aa15.81■□□□□ 0.12
SCAF11-209ENST00000547018 TBC1D9Q6ZT07 1266 aa15.81■□□□□ 0.12
SCAF11-209ENST00000547018 NOL8Q76FK4 1167 aaKnown RBP15.81■□□□□ 0.12
SCAF11-209ENST00000547018 ZNF330Q9Y3S2 320 aaPredicted RBP15.81■□□□□ 0.12
SCAF11-209ENST00000547018 PEAK1Q9H792 1746 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 RILPL2Q969X0 211 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 ARHGEF10O15013 1369 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 PTCH1Q13635 1447 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 SSH2Q76I76 1423 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 SLIT1O75093 1534 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 PI4KAP2A4QPH2 592 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 PI4KAP1Q8N8J0 262 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 KCNH5Q8NCM2 988 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 MON2Q7Z3U7 1717 aa15.8■□□□□ 0.12
SCAF11-209ENST00000547018 PNMA6EA0A0J9YXQ4 647 aa15.79■□□□□ 0.12
SCAF11-209ENST00000547018 PLEKHO1Q53GL0 409 aaPredicted RBP15.79■□□□□ 0.12
SCAF11-209ENST00000547018 RAPGEF4Q8WZA2 1011 aa15.79■□□□□ 0.12
SCAF11-209ENST00000547018 C19orf44Q9H6X5 657 aa15.79■□□□□ 0.12
SCAF11-209ENST00000547018 OS9Q13438 667 aaPredicted RBP15.79■□□□□ 0.12
SCAF11-209ENST00000547018 INTS3Q68E01 1043 aaKnown RBP15.79■□□□□ 0.12
SCAF11-209ENST00000547018 MAP3K5Q99683 1374 aa15.79■□□□□ 0.12
SCAF11-209ENST00000547018 NPHP4O75161 1426 aaPredicted RBP15.79■□□□□ 0.12
SCAF11-209ENST00000547018 RTN4Q9NQC3 1192 aaKnown RBP15.79■□□□□ 0.12
SCAF11-209ENST00000547018 CRB1P82279 1406 aa15.78■□□□□ 0.12
SCAF11-209ENST00000547018 GNAI2P04899 355 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms