RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 KDRP35968 1356 aa19.48■□□□□ 0.71
DDX54-203ENST00000546869 PRKRIP1Q9H875 184 aaPredicted RBP19.47■□□□□ 0.71
DDX54-203ENST00000546869 FAM182BQ5T319 152 aa19.46■□□□□ 0.71
DDX54-203ENST00000546869 MYBBP1AQ9BQG0 1328 aaKnown RBP19.45■□□□□ 0.7
DDX54-203ENST00000546869 RGPD1P0DJD0 1748 aa19.45■□□□□ 0.7
DDX54-203ENST00000546869 SULT6B1Q6IMI4 303 aa19.44■□□□□ 0.7
DDX54-203ENST00000546869 SPG7Q9UQ90 795 aa19.44■□□□□ 0.7
DDX54-203ENST00000546869 NUDCQ9Y266 331 aa19.44■□□□□ 0.7
DDX54-203ENST00000546869 PCDH11XQ9BZA7 1347 aa19.43■□□□□ 0.7
DDX54-203ENST00000546869 PCDH11YQ9BZA8 1340 aa19.43■□□□□ 0.7
DDX54-203ENST00000546869 AMOTQ4VCS5 1084 aa19.42■□□□□ 0.7
DDX54-203ENST00000546869 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
DDX54-203ENST00000546869 AEBP1Q8IUX7 1158 aa19.41■□□□□ 0.7
DDX54-203ENST00000546869 SF3B2Q13435 895 aaKnown RBP19.4■□□□□ 0.7
DDX54-203ENST00000546869 NKX1-1Q15270 411 aaPredicted RBP19.4■□□□□ 0.7
DDX54-203ENST00000546869 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
DDX54-203ENST00000546869 BCL11BQ9C0K0 894 aaPredicted RBP19.4■□□□□ 0.7
DDX54-203ENST00000546869 CYP27B1O15528 508 aa19.39■□□□□ 0.69
DDX54-203ENST00000546869 U2SURPO15042 1029 aaKnown RBP19.38■□□□□ 0.69
DDX54-203ENST00000546869 TRIM37O94972 964 aa19.38■□□□□ 0.69
DDX54-203ENST00000546869 PKD1L3Q7Z443 1732 aa19.38■□□□□ 0.69
DDX54-203ENST00000546869 FCHSD2O94868 740 aa19.37■□□□□ 0.69
DDX54-203ENST00000546869 HMOX1P09601 288 aa19.37■□□□□ 0.69
DDX54-203ENST00000546869 IFNL2Q8IZJ0 200 aa19.37■□□□□ 0.69
DDX54-203ENST00000546869 SHANK3Q9BYB0 1731 aa19.36■□□□□ 0.69
DDX54-203ENST00000546869 PHKG2P15735 406 aa19.35■□□□□ 0.69
DDX54-203ENST00000546869 EP400Q96L91 3159 aa19.35■□□□□ 0.69
DDX54-203ENST00000546869 PLSCR1O15162 318 aa19.34■□□□□ 0.69
DDX54-203ENST00000546869 ANP32CO43423 234 aa19.34■□□□□ 0.69
DDX54-203ENST00000546869 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
DDX54-203ENST00000546869 U2AF1L5P0DN76 240 aaPredicted RBP19.34■□□□□ 0.69
DDX54-203ENST00000546869 BAG6P46379 1132 aa19.34■□□□□ 0.69
DDX54-203ENST00000546869 U2AF1Q01081 240 aaKnown RBP eCLIP19.34■□□□□ 0.69
DDX54-203ENST00000546869 RSPH6AQ9H0K4 717 aa19.34■□□□□ 0.69
DDX54-203ENST00000546869 KCNQ2O43526 872 aa19.32■□□□□ 0.68
DDX54-203ENST00000546869 APBA3O96018 575 aa19.32■□□□□ 0.68
DDX54-203ENST00000546869 SBF2Q86WG5 1849 aa19.31■□□□□ 0.68
DDX54-203ENST00000546869 ZNF530Q6P9A1 599 aaPredicted RBP19.31■□□□□ 0.68
DDX54-203ENST00000546869 ACSBG1Q96GR2 724 aa19.31■□□□□ 0.68
DDX54-203ENST00000546869 DCAF5Q96JK2 942 aa19.31■□□□□ 0.68
DDX54-203ENST00000546869 CAMKK2Q96RR4 588 aa19.31■□□□□ 0.68
DDX54-203ENST00000546869 PNNQ9H307 717 aaKnown RBP19.31■□□□□ 0.68
DDX54-203ENST00000546869 PRIM1P49642 420 aaKnown RBP19.3■□□□□ 0.68
DDX54-203ENST00000546869 AKAP4Q5JQC9 854 aa19.3■□□□□ 0.68
DDX54-203ENST00000546869 PTF1AQ7RTS3 328 aa19.3■□□□□ 0.68
DDX54-203ENST00000546869 TNS1Q9HBL0 1735 aaKnown RBP19.29■□□□□ 0.68
DDX54-203ENST00000546869 PRKAR2BP31323 418 aa19.29■□□□□ 0.68
DDX54-203ENST00000546869 MTHFSDQ2M296 383 aaKnown RBP19.29■□□□□ 0.68
DDX54-203ENST00000546869 C1orf141Q5JVX7 400 aa19.29■□□□□ 0.68
DDX54-203ENST00000546869 DEFB132Q7Z7B7 95 aa19.29■□□□□ 0.68
DDX54-203ENST00000546869 NHSQ6T4R5 1651 aa19.29■□□□□ 0.68
DDX54-203ENST00000546869 ERVV-2B6SEH9 535 aa19.28■□□□□ 0.68
DDX54-203ENST00000546869 GAS2L2Q8NHY3 880 aa19.28■□□□□ 0.68
DDX54-203ENST00000546869 EN1Q05925 392 aaPredicted RBP19.27■□□□□ 0.68
DDX54-203ENST00000546869 PHACTR3Q96KR7 559 aa19.27■□□□□ 0.68
DDX54-203ENST00000546869 PLEKHF1Q96S99 279 aa19.26■□□□□ 0.67
DDX54-203ENST00000546869 EZH2Q15910 746 aaKnown RBP19.24■□□□□ 0.67
DDX54-203ENST00000546869 SYTL4Q96C24 671 aaPredicted RBP19.24■□□□□ 0.67
DDX54-203ENST00000546869 NEFMP07197 916 aa19.23■□□□□ 0.67
DDX54-203ENST00000546869 KDM6AO15550 1401 aaPredicted RBP19.23■□□□□ 0.67
DDX54-203ENST00000546869 RGPD3A6NKT7 1758 aaPredicted RBP19.22■□□□□ 0.67
DDX54-203ENST00000546869 RGPD4Q7Z3J3 1758 aa19.22■□□□□ 0.67
DDX54-203ENST00000546869 GNAT3A8MTJ3 354 aa19.22■□□□□ 0.67
DDX54-203ENST00000546869 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
DDX54-203ENST00000546869 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
DDX54-203ENST00000546869 MPRIPQ6WCQ1 1025 aa19.22■□□□□ 0.67
DDX54-203ENST00000546869 PROM2Q8N271 834 aa19.22■□□□□ 0.67
DDX54-203ENST00000546869 PIGBQ92521 554 aa19.22■□□□□ 0.67
DDX54-203ENST00000546869 DOT1LQ8TEK3 1739 aa19.22■□□□□ 0.67
DDX54-203ENST00000546869 RNMTO43148 476 aaKnown RBP19.21■□□□□ 0.67
DDX54-203ENST00000546869 TMOD3Q9NYL9 352 aa19.21■□□□□ 0.67
DDX54-203ENST00000546869 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
DDX54-203ENST00000546869 MAP3K5Q99683 1374 aa19.2■□□□□ 0.66
DDX54-203ENST00000546869 TXNRD1Q16881 649 aa19.2■□□□□ 0.66
DDX54-203ENST00000546869 SMARCC1Q92922 1105 aaPredicted RBP19.2■□□□□ 0.66
DDX54-203ENST00000546869 HMGB2P26583 209 aaKnown RBP19.19■□□□□ 0.66
DDX54-203ENST00000546869 CABP4P57796 275 aa19.19■□□□□ 0.66
DDX54-203ENST00000546869 SLC27A3Q5K4L6 730 aa19.19■□□□□ 0.66
DDX54-203ENST00000546869 LGR6Q9HBX8 967 aa19.19■□□□□ 0.66
DDX54-203ENST00000546869 TOGARAM1Q9Y4F4 1720 aa19.19■□□□□ 0.66
DDX54-203ENST00000546869 BTAF1O14981 1849 aa19.18■□□□□ 0.66
DDX54-203ENST00000546869 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
DDX54-203ENST00000546869 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
DDX54-203ENST00000546869 SLC52A2Q9HAB3 445 aa19.18■□□□□ 0.66
DDX54-203ENST00000546869 ADAMTS7Q9UKP4 1686 aa19.17■□□□□ 0.66
DDX54-203ENST00000546869 NFATC2IPQ8NCF5 419 aa19.17■□□□□ 0.66
DDX54-203ENST00000546869 IL17REQ8NFR9 667 aa19.17■□□□□ 0.66
DDX54-203ENST00000546869 RUNDC1Q96C34 613 aa19.17■□□□□ 0.66
DDX54-203ENST00000546869 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
DDX54-203ENST00000546869 CEMIPQ8WUJ3 1361 aa19.17■□□□□ 0.66
DDX54-203ENST00000546869 NFE2L2Q16236 605 aa19.16■□□□□ 0.66
DDX54-203ENST00000546869 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
DDX54-203ENST00000546869 ATG3Q9NT62 314 aa19.15■□□□□ 0.66
DDX54-203ENST00000546869 ITGB4P16144 1822 aa19.15■□□□□ 0.66
DDX54-203ENST00000546869 MRC1P22897 1456 aa19.15■□□□□ 0.66
DDX54-203ENST00000546869 RREB1Q92766 1687 aa19.14■□□□□ 0.66
DDX54-203ENST00000546869 KAT6BQ8WYB5 2073 aa19.14■□□□□ 0.65
DDX54-203ENST00000546869 NBPF14Q5TI25 921 aa19.14■□□□□ 0.65
DDX54-203ENST00000546869 RTF1Q92541 710 aaKnown RBP19.14■□□□□ 0.65
DDX54-203ENST00000546869 PALLDQ8WX93 1383 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms