RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 MBD3O95983 291 aa12.48□□□□□ -0.41
SSH1-203ENST00000546433 TMEM94Q12767 1356 aa12.47□□□□□ -0.41
SSH1-203ENST00000546433 WDR63Q8IWG1 891 aa12.47□□□□□ -0.41
SSH1-203ENST00000546433 RABEP1Q15276 862 aa12.47□□□□□ -0.41
SSH1-203ENST00000546433 HOMER1Q86YM7 354 aa12.47□□□□□ -0.41
SSH1-203ENST00000546433 TFCP2L1Q9NZI6 479 aa12.47□□□□□ -0.41
SSH1-203ENST00000546433 PARP3Q9Y6F1 533 aa12.47□□□□□ -0.41
SSH1-203ENST00000546433 NEUROD6Q96NK8 337 aa12.47□□□□□ -0.41
SSH1-203ENST00000546433 PDCP20941 246 aa12.46□□□□□ -0.41
SSH1-203ENST00000546433 CCDC39Q9UFE4 941 aa12.46□□□□□ -0.41
SSH1-203ENST00000546433 ARAP3Q8WWN8 1544 aa12.46□□□□□ -0.41
SSH1-203ENST00000546433 GLI2P10070 1586 aa12.46□□□□□ -0.41
SSH1-203ENST00000546433 ZNF592Q92610 1267 aa12.46□□□□□ -0.41
SSH1-203ENST00000546433 PRKAR2BP31323 418 aa12.46□□□□□ -0.41
SSH1-203ENST00000546433 WASHC4Q2M389 1173 aa12.46□□□□□ -0.41
SSH1-203ENST00000546433 TEX35Q5T0J7 233 aa12.46□□□□□ -0.41
SSH1-203ENST00000546433 FSD1Q9BTV5 496 aa12.46□□□□□ -0.41
SSH1-203ENST00000546433 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.42
SSH1-203ENST00000546433 OLFM4Q6UX06 510 aa12.46□□□□□ -0.42
SSH1-203ENST00000546433 PLEKHG1Q9ULL1 1385 aa12.46□□□□□ -0.42
SSH1-203ENST00000546433 APBA3O96018 575 aa12.46□□□□□ -0.42
SSH1-203ENST00000546433 SART3Q15020 963 aaKnown RBP12.46□□□□□ -0.42
SSH1-203ENST00000546433 BTG4Q9NY30 223 aa12.46□□□□□ -0.42
SSH1-203ENST00000546433 TBC1D2BQ9UPU7 963 aa12.46□□□□□ -0.42
SSH1-203ENST00000546433 EFCAB6Q5THR3 1501 aa12.45□□□□□ -0.42
SSH1-203ENST00000546433 ERCC6L2Q5T890 1561 aa12.45□□□□□ -0.42
SSH1-203ENST00000546433 GNAI2P04899 355 aa12.45□□□□□ -0.42
SSH1-203ENST00000546433 CCT4P50991 539 aaKnown RBP12.45□□□□□ -0.42
SSH1-203ENST00000546433 PDE4CQ08493 712 aa12.45□□□□□ -0.42
SSH1-203ENST00000546433 ZNF335Q9H4Z2 1342 aaPredicted RBP12.45□□□□□ -0.42
SSH1-203ENST00000546433 IL2RBP14784 551 aa12.45□□□□□ -0.42
SSH1-203ENST00000546433 GNL3LQ9NVN8 582 aaKnown RBP12.45□□□□□ -0.42
SSH1-203ENST00000546433 A2ML1A8K2U0 1454 aa12.45□□□□□ -0.42
SSH1-203ENST00000546433 EXOSC9Q06265 439 aaKnown RBP12.45□□□□□ -0.42
SSH1-203ENST00000546433 NFKBIBQ15653 356 aa12.45□□□□□ -0.42
SSH1-203ENST00000546433 RPGRQ92834 1020 aaKnown RBP12.45□□□□□ -0.42
SSH1-203ENST00000546433 ARGLU1Q9NWB6 273 aaPredicted RBP12.45□□□□□ -0.42
SSH1-203ENST00000546433 AIMP1Q12904 312 aaKnown RBP12.44□□□□□ -0.42
SSH1-203ENST00000546433 ANKRD24Q8TF21 1146 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 ACBD3Q9H3P7 528 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 ACEP12821 1306 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 MAST1Q9Y2H9 1570 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 PRM3Q9NNZ6 103 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 HSP90AB3PQ58FF7 597 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 SURF6O75683 361 aaKnown RBP12.44□□□□□ -0.42
SSH1-203ENST00000546433 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 FAM43AQ8N2R8 423 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 FLAD1Q8NFF5 587 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 KDM5CP41229 1560 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 ADCY10Q96PN6 1610 aa12.44□□□□□ -0.42
SSH1-203ENST00000546433 RAD21O60216 631 aa12.43□□□□□ -0.42
SSH1-203ENST00000546433 ZCRB1Q8TBF4 217 aaKnown RBP12.43□□□□□ -0.42
SSH1-203ENST00000546433 PDZRN3Q9UPQ7 1066 aa12.43□□□□□ -0.42
SSH1-203ENST00000546433 CHRNA2Q15822 529 aa12.43□□□□□ -0.42
SSH1-203ENST00000546433 ADGRF5Q8IZF2 1346 aa12.43□□□□□ -0.42
SSH1-203ENST00000546433 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
SSH1-203ENST00000546433 ZNF428Q96B54 188 aa12.43□□□□□ -0.42
SSH1-203ENST00000546433 CCDC43Q96MW1 224 aaKnown RBP12.43□□□□□ -0.42
SSH1-203ENST00000546433 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
SSH1-203ENST00000546433 PIK3R4Q99570 1358 aa12.42□□□□□ -0.42
SSH1-203ENST00000546433 DHX8Q14562 1220 aaKnown RBP12.42□□□□□ -0.42
SSH1-203ENST00000546433 BICDL1Q6ZP65 573 aa12.42□□□□□ -0.42
SSH1-203ENST00000546433 TMOD2Q9NZR1 351 aa12.42□□□□□ -0.42
SSH1-203ENST00000546433 CDR1P51861 262 aa12.42□□□□□ -0.42
SSH1-203ENST00000546433 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
SSH1-203ENST00000546433 NASPP49321 788 aaPredicted RBP12.42□□□□□ -0.42
SSH1-203ENST00000546433 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 ZNF396Q96N95 335 aaPredicted RBP12.41□□□□□ -0.42
SSH1-203ENST00000546433 ARHGEF5Q12774 1597 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 PTPRMP28827 1452 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 SLC3A2P08195 630 aaKnown RBP12.41□□□□□ -0.42
SSH1-203ENST00000546433 GPR162Q16538 588 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 ABCC1P33527 1531 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 MNS1Q8NEH6 495 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 SRCIN1Q9C0H9 1055 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 CCP110O43303 1012 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 ANKRD1Q15327 319 aa12.41□□□□□ -0.42
SSH1-203ENST00000546433 NOB1Q9ULX3 412 aaKnown RBP12.41□□□□□ -0.42
SSH1-203ENST00000546433 SPATA31A6Q5VVP1 1343 aa12.4□□□□□ -0.42
SSH1-203ENST00000546433 FAM196AQ6ZSG2 479 aa12.4□□□□□ -0.42
SSH1-203ENST00000546433 JCADQ9P266 1359 aa12.4□□□□□ -0.42
SSH1-203ENST00000546433 BTBD11A6QL63 1104 aa12.4□□□□□ -0.42
SSH1-203ENST00000546433 MTERF4Q7Z6M4 381 aaKnown RBP12.4□□□□□ -0.42
SSH1-203ENST00000546433 AEBP1Q8IUX7 1158 aa12.4□□□□□ -0.42
SSH1-203ENST00000546433 TCOF1Q13428 1488 aaKnown RBP12.4□□□□□ -0.42
SSH1-203ENST00000546433 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
SSH1-203ENST00000546433 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.42
SSH1-203ENST00000546433 SDF4Q9BRK5 362 aa12.4□□□□□ -0.42
SSH1-203ENST00000546433 RBM6P78332 1123 aaKnown RBP12.4□□□□□ -0.42
SSH1-203ENST00000546433 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
SSH1-203ENST00000546433 SULT6B1Q6IMI4 303 aa12.39□□□□□ -0.43
SSH1-203ENST00000546433 NAIPQ13075 1403 aa12.39□□□□□ -0.43
SSH1-203ENST00000546433 TRAK2O60296 914 aa12.39□□□□□ -0.43
SSH1-203ENST00000546433 PIP4K2AP48426 406 aaPredicted RBP12.39□□□□□ -0.43
SSH1-203ENST00000546433 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
SSH1-203ENST00000546433 BEGAINQ9BUH8 593 aa12.39□□□□□ -0.43
SSH1-203ENST00000546433 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
SSH1-203ENST00000546433 KINO60870 393 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms