RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 NCAPGQ9BPX3 1015 aa12.24□□□□□ -0.45
SOD2-216ENST00000546260 GEMIN8Q9NWZ8 242 aaKnown RBP12.24□□□□□ -0.45
SOD2-216ENST00000546260 ATAD2BQ9ULI0 1458 aa12.24□□□□□ -0.45
SOD2-216ENST00000546260 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
SOD2-216ENST00000546260 KIF2AO00139 706 aaPredicted RBP12.24□□□□□ -0.45
SOD2-216ENST00000546260 ANO6Q4KMQ2 910 aa12.24□□□□□ -0.45
SOD2-216ENST00000546260 ZNF165P49910 485 aa12.24□□□□□ -0.45
SOD2-216ENST00000546260 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
SOD2-216ENST00000546260 NLRP1Q9C000 1473 aa12.24□□□□□ -0.45
SOD2-216ENST00000546260 GOLIM4O00461 696 aa12.23□□□□□ -0.45
SOD2-216ENST00000546260 IVLP07476 585 aa12.23□□□□□ -0.45
SOD2-216ENST00000546260 NRBP1Q9UHY1 535 aa12.23□□□□□ -0.45
SOD2-216ENST00000546260 ANKRD65E5RJM6 399 aa12.23□□□□□ -0.45
SOD2-216ENST00000546260 HSP90B1P14625 803 aaKnown RBP12.23□□□□□ -0.45
SOD2-216ENST00000546260 MCM6Q14566 821 aa12.23□□□□□ -0.45
SOD2-216ENST00000546260 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
SOD2-216ENST00000546260 DTNBO60941 627 aa12.23□□□□□ -0.45
SOD2-216ENST00000546260 HMMRO75330 724 aa12.23□□□□□ -0.45
SOD2-216ENST00000546260 CENPHQ9H3R5 247 aa12.23□□□□□ -0.45
SOD2-216ENST00000546260 VPS18Q9P253 973 aa12.23□□□□□ -0.45
SOD2-216ENST00000546260 ZMYM3Q14202 1370 aa12.22□□□□□ -0.45
SOD2-216ENST00000546260 FGD5Q6ZNL6 1462 aa12.22□□□□□ -0.45
SOD2-216ENST00000546260 CEBPZQ03701 1054 aaKnown RBP12.22□□□□□ -0.45
SOD2-216ENST00000546260 USP26Q9BXU7 913 aa12.22□□□□□ -0.45
SOD2-216ENST00000546260 ZSWIM4Q9H7M6 989 aa12.22□□□□□ -0.45
SOD2-216ENST00000546260 CYP2C19P33261 490 aa12.22□□□□□ -0.45
SOD2-216ENST00000546260 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
SOD2-216ENST00000546260 DNAI1Q9UI46 699 aa12.22□□□□□ -0.45
SOD2-216ENST00000546260 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
SOD2-216ENST00000546260 TRMT2AQ8IZ69 625 aaKnown RBP12.22□□□□□ -0.45
SOD2-216ENST00000546260 BCCIPQ9P287 314 aaKnown RBP eCLIP12.22□□□□□ -0.45
SOD2-216ENST00000546260 PHACTR2O75167 634 aa12.21□□□□□ -0.45
SOD2-216ENST00000546260 EIF3JO75822 258 aaKnown RBP12.21□□□□□ -0.45
SOD2-216ENST00000546260 KRT85P78386 507 aa12.21□□□□□ -0.45
SOD2-216ENST00000546260 SYCP1Q15431 976 aa12.21□□□□□ -0.45
SOD2-216ENST00000546260 ZSCAN25Q6NSZ9 544 aa12.21□□□□□ -0.45
SOD2-216ENST00000546260 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
SOD2-216ENST00000546260 SRRTQ9BXP5 876 aaKnown RBP12.21□□□□□ -0.45
SOD2-216ENST00000546260 ACBD3Q9H3P7 528 aa12.21□□□□□ -0.45
SOD2-216ENST00000546260 ARFGAP3Q9NP61 516 aa12.21□□□□□ -0.45
SOD2-216ENST00000546260 ATP6V1AP38606 617 aa12.21□□□□□ -0.46
SOD2-216ENST00000546260 FOSBP53539 338 aa12.21□□□□□ -0.46
SOD2-216ENST00000546260 TYRO3Q06418 890 aa12.21□□□□□ -0.46
SOD2-216ENST00000546260 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.46
SOD2-216ENST00000546260 CLEC17AQ6ZS10 378 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.2□□□□□ -0.46
SOD2-216ENST00000546260 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 CCDC69A6NI79 296 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 KIF2CQ99661 725 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 DNAJC25Q9H1X3 360 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 BRMS1Q9HCU9 246 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 ZCCHC17Q9NP64 241 aaKnown RBP12.2□□□□□ -0.46
SOD2-216ENST00000546260 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 H3BQV1 296 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 PPP2R5AQ15172 486 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 IFFO2Q5TF58 517 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 PPM1EQ8WY54 764 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 ANKRD36BQ8N2N9 1353 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 RALGAPBQ86X10 1494 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 SRCIN1Q9C0H9 1055 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 KCNF1Q9H3M0 494 aa12.2□□□□□ -0.46
SOD2-216ENST00000546260 SPAG9O60271 1321 aaKnown RBP12.2□□□□□ -0.46
SOD2-216ENST00000546260 STX6O43752 255 aa12.19□□□□□ -0.46
SOD2-216ENST00000546260 BRD1O95696 1058 aa12.19□□□□□ -0.46
SOD2-216ENST00000546260 CCDC172P0C7W6 258 aa12.19□□□□□ -0.46
SOD2-216ENST00000546260 SDSP20132 328 aa12.19□□□□□ -0.46
SOD2-216ENST00000546260 DNM1Q05193 864 aaKnown RBP12.19□□□□□ -0.46
SOD2-216ENST00000546260 TTC22Q5TAA0 569 aa12.19□□□□□ -0.46
SOD2-216ENST00000546260 YY1AP1Q9H869 796 aa12.19□□□□□ -0.46
SOD2-216ENST00000546260 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
SOD2-216ENST00000546260 SEC31AO94979 1220 aaKnown RBP12.19□□□□□ -0.46
SOD2-216ENST00000546260 SFPQP23246 707 aaKnown RBP eCLIP12.19□□□□□ -0.46
SOD2-216ENST00000546260 OS9Q13438 667 aaPredicted RBP12.19□□□□□ -0.46
SOD2-216ENST00000546260 SMC1AQ14683 1233 aaKnown RBP12.19□□□□□ -0.46
SOD2-216ENST00000546260 TPM1P09493 284 aa12.19□□□□□ -0.46
SOD2-216ENST00000546260 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
SOD2-216ENST00000546260 NEMFO60524 1076 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 SAFB2Q14151 953 aaKnown RBP eCLIP12.18□□□□□ -0.46
SOD2-216ENST00000546260 CCDC83Q8IWF9 413 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 PDRG1Q9NUG6 133 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 TFIP11Q9UBB9 837 aaKnown RBP12.18□□□□□ -0.46
SOD2-216ENST00000546260 ANKRD50Q9ULJ7 1429 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 ZSCAN22P10073 491 aaPredicted RBP12.18□□□□□ -0.46
SOD2-216ENST00000546260 LRCH2Q5VUJ6 765 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 PDILTQ8N807 584 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 SMARCE1Q969G3 411 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 ZDHHC9Q9Y397 364 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 PNMA6AP0CW24 399 aaPredicted RBP12.18□□□□□ -0.46
SOD2-216ENST00000546260 DAPK1P53355 1430 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 KIF21AQ7Z4S6 1674 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 RPAINQ86UA6 219 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 CLCN6P51797 869 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 CCDC73Q6ZRK6 1079 aa12.18□□□□□ -0.46
SOD2-216ENST00000546260 API5Q9BZZ5 524 aaKnown RBP12.18□□□□□ -0.46
SOD2-216ENST00000546260 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
SOD2-216ENST00000546260 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.466e-6■□□□□ 8.8
SOD2-216ENST00000546260 LARP1BQ659C4 914 aaKnown RBP12.17□□□□□ -0.46
SOD2-216ENST00000546260 GOLGA5Q8TBA6 731 aa12.17□□□□□ -0.46
SOD2-216ENST00000546260 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 470 ms