RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
NECAP1-209ENST00000546181 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
NECAP1-209ENST00000546181 HOXC9P31274 260 aa16.22■□□□□ 0.19
NECAP1-209ENST00000546181 PTGER2P43116 358 aa16.22■□□□□ 0.19
NECAP1-209ENST00000546181 COG3Q96JB2 828 aa16.22■□□□□ 0.19
NECAP1-209ENST00000546181 USP47Q96K76 1375 aa16.22■□□□□ 0.19
NECAP1-209ENST00000546181 NINLQ9Y2I6 1382 aa16.22■□□□□ 0.19
NECAP1-209ENST00000546181 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
NECAP1-209ENST00000546181 RRS1Q15050 365 aaKnown RBP16.21■□□□□ 0.19
NECAP1-209ENST00000546181 ZNF827Q17R98 1081 aa16.21■□□□□ 0.19
NECAP1-209ENST00000546181 ANKRD36BQ8N2N9 1353 aa16.21■□□□□ 0.19
NECAP1-209ENST00000546181 MEGF6O75095 1541 aa16.2■□□□□ 0.18
NECAP1-209ENST00000546181 AMPHP49418 695 aa16.2■□□□□ 0.18
NECAP1-209ENST00000546181 GGNBP2Q9H3C7 697 aa16.2■□□□□ 0.18
NECAP1-209ENST00000546181 LRRC4BQ9NT99 713 aa16.2■□□□□ 0.18
NECAP1-209ENST00000546181 KIF20BQ96Q89 1820 aa16.19■□□□□ 0.18
NECAP1-209ENST00000546181 KCNQ4P56696 695 aa16.19■□□□□ 0.18
NECAP1-209ENST00000546181 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
NECAP1-209ENST00000546181 USHBP1Q8N6Y0 703 aa16.19■□□□□ 0.18
NECAP1-209ENST00000546181 YY1P25490 414 aa16.18■□□□□ 0.18
NECAP1-209ENST00000546181 TUBGCP6Q96RT7 1819 aa16.17■□□□□ 0.18
NECAP1-209ENST00000546181 FYB1O15117 783 aa16.17■□□□□ 0.18
NECAP1-209ENST00000546181 TMF1P82094 1093 aa16.16■□□□□ 0.18
NECAP1-209ENST00000546181 SYTL4Q96C24 671 aaPredicted RBP16.16■□□□□ 0.18
NECAP1-209ENST00000546181 SGIP1Q9BQI5 828 aa16.16■□□□□ 0.18
NECAP1-209ENST00000546181 FHDC1Q9C0D6 1143 aaPredicted RBP16.16■□□□□ 0.18
NECAP1-209ENST00000546181 NSD2O96028 1365 aa16.15■□□□□ 0.18
NECAP1-209ENST00000546181 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
NECAP1-209ENST00000546181 NBPF6Q5VWK0 638 aa16.15■□□□□ 0.18
NECAP1-209ENST00000546181 NBPF4Q96M43 638 aa16.15■□□□□ 0.18
NECAP1-209ENST00000546181 MTFR1LQ9H019 292 aa16.15■□□□□ 0.18
NECAP1-209ENST00000546181 LY75O60449 1722 aa16.14■□□□□ 0.17
NECAP1-209ENST00000546181 UTRNP46939 3433 aa16.13■□□□□ 0.17
NECAP1-209ENST00000546181 HSP90AB2PQ58FF8 381 aa16.13■□□□□ 0.17
NECAP1-209ENST00000546181 ZCRB1Q8TBF4 217 aaKnown RBP16.13■□□□□ 0.17
NECAP1-209ENST00000546181 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
NECAP1-209ENST00000546181 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
NECAP1-209ENST00000546181 SYT17Q9BSW7 474 aa16.12■□□□□ 0.17
NECAP1-209ENST00000546181 CARD14Q9BXL6 1004 aa16.12■□□□□ 0.17
NECAP1-209ENST00000546181 QSER1Q2KHR3 1735 aa16.11■□□□□ 0.17
NECAP1-209ENST00000546181 NSD3Q9BZ95 1437 aa16.11■□□□□ 0.17
NECAP1-209ENST00000546181 PNPLA7Q6ZV29 1317 aa16.1■□□□□ 0.17
NECAP1-209ENST00000546181 SLC24A1O60721 1099 aa16.09■□□□□ 0.17
NECAP1-209ENST00000546181 ARXQ96QS3 562 aa16.09■□□□□ 0.17
NECAP1-209ENST00000546181 EMILIN1Q9Y6C2 1016 aa16.09■□□□□ 0.17
NECAP1-209ENST00000546181 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.17
NECAP1-209ENST00000546181 SLC27A3Q5K4L6 730 aa16.08■□□□□ 0.16
NECAP1-209ENST00000546181 SMG6Q86US8 1419 aaKnown RBP16.08■□□□□ 0.16
NECAP1-209ENST00000546181 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
NECAP1-209ENST00000546181 RAPGEF4Q8WZA2 1011 aa16.07■□□□□ 0.16
NECAP1-209ENST00000546181 INSRP06213 1382 aa16.07■□□□□ 0.16
NECAP1-209ENST00000546181 FLT4P35916 1363 aa16.07■□□□□ 0.16
NECAP1-209ENST00000546181 COL24A1Q17RW2 1714 aa16.06■□□□□ 0.16
NECAP1-209ENST00000546181 TATP17735 454 aaPredicted RBP16.06■□□□□ 0.16
NECAP1-209ENST00000546181 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
NECAP1-209ENST00000546181 TFCP2L1Q9NZI6 479 aa16.06■□□□□ 0.16
NECAP1-209ENST00000546181 CCNL1Q9UK58 526 aaPredicted RBP16.06■□□□□ 0.16
NECAP1-209ENST00000546181 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
NECAP1-209ENST00000546181 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
NECAP1-209ENST00000546181 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
NECAP1-209ENST00000546181 ITGB4P16144 1822 aa16.05■□□□□ 0.16
NECAP1-209ENST00000546181 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
NECAP1-209ENST00000546181 C5P01031 1676 aa16.05■□□□□ 0.16
NECAP1-209ENST00000546181 CDCA8Q53HL2 280 aa16.04■□□□□ 0.16
NECAP1-209ENST00000546181 PKD1L3Q7Z443 1732 aa16.04■□□□□ 0.16
NECAP1-209ENST00000546181 CYP27B1O15528 508 aa16.03■□□□□ 0.16
NECAP1-209ENST00000546181 CHD4Q14839 1912 aa16.03■□□□□ 0.16
NECAP1-209ENST00000546181 TAF1LQ8IZX4 1826 aa16.03■□□□□ 0.16
NECAP1-209ENST00000546181 CGNL1Q0VF96 1302 aa16.02■□□□□ 0.16
NECAP1-209ENST00000546181 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
NECAP1-209ENST00000546181 MAP3K5Q99683 1374 aa16.01■□□□□ 0.15
NECAP1-209ENST00000546181 PCDH11XQ9BZA7 1347 aa16.01■□□□□ 0.15
NECAP1-209ENST00000546181 PCDH11YQ9BZA8 1340 aa16.01■□□□□ 0.15
NECAP1-209ENST00000546181 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
NECAP1-209ENST00000546181 COL23A1Q86Y22 540 aaPredicted RBP16.01■□□□□ 0.15
NECAP1-209ENST00000546181 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
NECAP1-209ENST00000546181 GOLGB1Q14789 3259 aaKnown RBP16■□□□□ 0.15
NECAP1-209ENST00000546181 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
NECAP1-209ENST00000546181 SMIM5Q71RC9 77 aa16■□□□□ 0.15
NECAP1-209ENST00000546181 ZNF784Q8NCA9 323 aaPredicted RBP16■□□□□ 0.15
NECAP1-209ENST00000546181 SLC16A10Q8TF71 515 aa16■□□□□ 0.15
NECAP1-209ENST00000546181 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
NECAP1-209ENST00000546181 PALLDQ8WX93 1383 aa16■□□□□ 0.15
NECAP1-209ENST00000546181 POLD1P28340 1107 aa15.99■□□□□ 0.15
NECAP1-209ENST00000546181 TNNT2P45379 298 aaPredicted RBP15.99■□□□□ 0.15
NECAP1-209ENST00000546181 PELP1Q8IZL8 1130 aaKnown RBP15.99■□□□□ 0.15
NECAP1-209ENST00000546181 NCAPD2Q15021 1401 aa15.99■□□□□ 0.15
NECAP1-209ENST00000546181 GPR162Q16538 588 aa15.98■□□□□ 0.15
NECAP1-209ENST00000546181 AMIGO3Q86WK7 504 aa15.98■□□□□ 0.15
NECAP1-209ENST00000546181 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
NECAP1-209ENST00000546181 EYA1Q99502 592 aa15.97■□□□□ 0.15
NECAP1-209ENST00000546181 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
NECAP1-209ENST00000546181 C4BP0C0L5 1744 aa15.97■□□□□ 0.15
NECAP1-209ENST00000546181 WASHC2AQ641Q2 1341 aa15.95■□□□□ 0.14
NECAP1-209ENST00000546181 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
NECAP1-209ENST00000546181 PIGBQ92521 554 aa15.95■□□□□ 0.14
NECAP1-209ENST00000546181 TIMELESSQ9UNS1 1208 aa15.95■□□□□ 0.14
NECAP1-209ENST00000546181 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
NECAP1-209ENST00000546181 PHF14O94880 888 aa15.93■□□□□ 0.14
NECAP1-209ENST00000546181 EIF4A2Q14240 407 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms