RNA–Protein interactions for RNA: ENST00000545948.5

ERC1-218, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best)

Gene ERC1, Length 2,881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-218ENST00000545948 CASC1Q6TDU7 716 aa11.79□□□□□ -0.52
ERC1-218ENST00000545948 CDK12Q9NYV4 1490 aaPredicted RBP11.78□□□□□ -0.52
ERC1-218ENST00000545948 MSNP26038 577 aaKnown RBP11.78□□□□□ -0.52
ERC1-218ENST00000545948 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
ERC1-218ENST00000545948 THUMPD2Q9BTF0 503 aaKnown RBP11.78□□□□□ -0.52
ERC1-218ENST00000545948 MYO5BQ9ULV0 1848 aa11.78□□□□□ -0.52
ERC1-218ENST00000545948 UBAP1LF5GYI3 381 aa11.78□□□□□ -0.52
ERC1-218ENST00000545948 OFD1O75665 1012 aa11.78□□□□□ -0.52
ERC1-218ENST00000545948 HMOX1P09601 288 aa11.78□□□□□ -0.52
ERC1-218ENST00000545948 IL13P35225 146 aa11.78□□□□□ -0.52
ERC1-218ENST00000545948 MCTP1Q6DN14 999 aa11.78□□□□□ -0.52
ERC1-218ENST00000545948 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.78□□□□□ -0.52
ERC1-218ENST00000545948 ZNF335Q9H4Z2 1342 aaPredicted RBP11.78□□□□□ -0.52
ERC1-218ENST00000545948 MAP2P11137 1827 aaKnown RBP11.78□□□□□ -0.52
ERC1-218ENST00000545948 ST18O60284 1047 aa11.77□□□□□ -0.52
ERC1-218ENST00000545948 RPAP2Q8IXW5 612 aaPredicted RBP11.77□□□□□ -0.52
ERC1-218ENST00000545948 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.52
ERC1-218ENST00000545948 CPSF1Q10570 1443 aaKnown RBP11.77□□□□□ -0.52
ERC1-218ENST00000545948 A2ML1A8K2U0 1454 aa11.77□□□□□ -0.52
ERC1-218ENST00000545948 KNDC1Q76NI1 1749 aa11.77□□□□□ -0.53
ERC1-218ENST00000545948 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.53
ERC1-218ENST00000545948 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.53
ERC1-218ENST00000545948 AATKQ6ZMQ8 1374 aa11.77□□□□□ -0.53
ERC1-218ENST00000545948 DLC1Q96QB1 1528 aa11.77□□□□□ -0.53
ERC1-218ENST00000545948 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.53
ERC1-218ENST00000545948 C8orf58Q8NAV2 365 aa11.77□□□□□ -0.53
ERC1-218ENST00000545948 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.53
ERC1-218ENST00000545948 KIAA1211Q6ZU35 1233 aa11.76□□□□□ -0.53
ERC1-218ENST00000545948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.76□□□□□ -0.53
ERC1-218ENST00000545948 EDC4Q6P2E9 1401 aaKnown RBP11.76□□□□□ -0.53
ERC1-218ENST00000545948 REC8O95072 547 aa11.76□□□□□ -0.53
ERC1-218ENST00000545948 CAVIN1Q6NZI2 390 aaKnown RBP11.76□□□□□ -0.53
ERC1-218ENST00000545948 PDCL3Q9H2J4 239 aa11.76□□□□□ -0.53
ERC1-218ENST00000545948 ATP10DQ9P241 1426 aa11.75□□□□□ -0.53
ERC1-218ENST00000545948 PDLIM2Q96JY6 352 aa11.75□□□□□ -0.53
ERC1-218ENST00000545948 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
ERC1-218ENST00000545948 NCLP19338 710 aaKnown RBP11.74□□□□□ -0.53
ERC1-218ENST00000545948 SDSP20132 328 aa11.74□□□□□ -0.53
ERC1-218ENST00000545948 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
ERC1-218ENST00000545948 ZNF500O60304 480 aaPredicted RBP11.73□□□□□ -0.53
ERC1-218ENST00000545948 EMILIN1Q9Y6C2 1016 aa11.73□□□□□ -0.53
ERC1-218ENST00000545948 AK9Q5TCS8 1911 aa11.73□□□□□ -0.53
ERC1-218ENST00000545948 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
ERC1-218ENST00000545948 HSPA1LP34931 641 aa11.73□□□□□ -0.53
ERC1-218ENST00000545948 CEP85Q6P2H3 762 aa11.73□□□□□ -0.53
ERC1-218ENST00000545948 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
ERC1-218ENST00000545948 FBLN1P23142 703 aa11.73□□□□□ -0.53
ERC1-218ENST00000545948 MCM5P33992 734 aa11.73□□□□□ -0.53
ERC1-218ENST00000545948 PTPRCP08575 1304 aa11.72□□□□□ -0.53
ERC1-218ENST00000545948 C16orf71Q8IYS4 520 aaPredicted RBP11.72□□□□□ -0.53
ERC1-218ENST00000545948 RBSNQ9H1K0 784 aa11.72□□□□□ -0.53
ERC1-218ENST00000545948 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
ERC1-218ENST00000545948 ERC2O15083 957 aa11.72□□□□□ -0.53
ERC1-218ENST00000545948 RGS12O14924 1447 aa11.71□□□□□ -0.53
ERC1-218ENST00000545948 PRPF40AO75400 957 aaKnown RBP11.71□□□□□ -0.53
ERC1-218ENST00000545948 PKP1Q13835 747 aa11.71□□□□□ -0.53
ERC1-218ENST00000545948 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
ERC1-218ENST00000545948 KIAA0232Q92628 1395 aa11.71□□□□□ -0.53
ERC1-218ENST00000545948 MBD3O95983 291 aa11.71□□□□□ -0.54
ERC1-218ENST00000545948 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.54
ERC1-218ENST00000545948 MCM2P49736 904 aa11.71□□□□□ -0.54
ERC1-218ENST00000545948 LRSAM1Q6UWE0 723 aa11.71□□□□□ -0.54
ERC1-218ENST00000545948 OSBPL3Q9H4L5 887 aa11.71□□□□□ -0.54
ERC1-218ENST00000545948 HMMRO75330 724 aa11.7□□□□□ -0.54
ERC1-218ENST00000545948 GPT2Q8TD30 523 aa11.7□□□□□ -0.54
ERC1-218ENST00000545948 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
ERC1-218ENST00000545948 ZDHHC9Q9Y397 364 aa11.7□□□□□ -0.54
ERC1-218ENST00000545948 CSPP1Q1MSJ5 1256 aa11.7□□□□□ -0.54
ERC1-218ENST00000545948 ZGPATQ8N5A5 531 aaKnown RBP11.7□□□□□ -0.54
ERC1-218ENST00000545948 COG3Q96JB2 828 aa11.7□□□□□ -0.54
ERC1-218ENST00000545948 FAM83GA6ND36 823 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 OTUD7AQ8TE49 926 aaPredicted RBP11.69□□□□□ -0.54
ERC1-218ENST00000545948 PKNOX2Q96KN3 472 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 MAP7D2Q96T17 732 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 ZMYND15Q9H091 742 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 TOM1O60784 492 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 NME9Q86XW9 330 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 ZKSCAN5Q9Y2L8 839 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 STRCP1A6NGW2 1772 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 MSH6P52701 1360 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 CHL1O00533 1208 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 ESF1Q9H501 851 aaKnown RBP11.69□□□□□ -0.54
ERC1-218ENST00000545948 CCDC39Q9UFE4 941 aa11.69□□□□□ -0.54
ERC1-218ENST00000545948 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
ERC1-218ENST00000545948 WAPLQ7Z5K2 1190 aa11.68□□□□□ -0.54
ERC1-218ENST00000545948 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
ERC1-218ENST00000545948 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
ERC1-218ENST00000545948 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
ERC1-218ENST00000545948 DCTN1Q14203 1278 aa11.67□□□□□ -0.54
ERC1-218ENST00000545948 TMEM63CQ9P1W3 806 aa11.67□□□□□ -0.54
ERC1-218ENST00000545948 MON2Q7Z3U7 1717 aa11.67□□□□□ -0.54
ERC1-218ENST00000545948 SMARCA5O60264 1052 aaPredicted RBP11.67□□□□□ -0.54
ERC1-218ENST00000545948 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
ERC1-218ENST00000545948 SETD1AO15047 1707 aaKnown RBP11.67□□□□□ -0.54
ERC1-218ENST00000545948 PDE1AP54750 535 aa11.66□□□□□ -0.54
ERC1-218ENST00000545948 CUL4AQ13619 759 aa11.66□□□□□ -0.54
ERC1-218ENST00000545948 INTS4Q96HW7 963 aaKnown RBP11.66□□□□□ -0.54
ERC1-218ENST00000545948 MEIS3Q99687 375 aa11.66□□□□□ -0.54
ERC1-218ENST00000545948 BRD1O95696 1058 aa11.66□□□□□ -0.54
ERC1-218ENST00000545948 MCCP23508 829 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms