RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 EXOC6Q8TAG9 804 aa10.51□□□□□ -0.73
CLIP1-218ENST00000545889 SIRT1Q96EB6 747 aa10.51□□□□□ -0.73
CLIP1-218ENST00000545889 SBNO2Q9Y2G9 1366 aa10.51□□□□□ -0.73
CLIP1-218ENST00000545889 SYNMO15061 1565 aa10.51□□□□□ -0.73
CLIP1-218ENST00000545889 GOLGA6L3A6NEY3 463 aa10.51□□□□□ -0.73
CLIP1-218ENST00000545889 RRP1P56182 461 aaKnown RBP10.51□□□□□ -0.73
CLIP1-218ENST00000545889 GNAI1P63096 354 aa10.51□□□□□ -0.73
CLIP1-218ENST00000545889 PAXIP1Q6ZW49 1069 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-218ENST00000545889 CREBRFQ8IUR6 639 aa10.51□□□□□ -0.73
CLIP1-218ENST00000545889 SLAIN2Q9P270 581 aa10.51□□□□□ -0.73
CLIP1-218ENST00000545889 SMG6Q86US8 1419 aaKnown RBP10.51□□□□□ -0.73
CLIP1-218ENST00000545889 PIK3C2BO00750 1634 aa10.51□□□□□ -0.73
CLIP1-218ENST00000545889 ALKQ9UM73 1620 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 TOM1O60784 492 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 GCP02774 474 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 IKQ13123 557 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-218ENST00000545889 CCDC27Q2M243 656 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 RILPL2Q969X0 211 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 ZHX1Q9UKY1 873 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-218ENST00000545889 MAP3K19Q56UN5 1328 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 MADDQ8WXG6 1647 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 MAPK8IP2Q13387 824 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-218ENST00000545889 DRC7Q8IY82 874 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 SPRYD3Q8NCJ5 442 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 LRRC59Q96AG4 307 aaKnown RBP10.5□□□□□ -0.73
CLIP1-218ENST00000545889 KIF13AQ9H1H9 1805 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 PTPRMP28827 1452 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 TRPM1Q7Z4N2 1603 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 PLEKHG3A1L390 1219 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 SF3A1Q15459 793 aaKnown RBP10.5□□□□□ -0.73
CLIP1-218ENST00000545889 VWDEQ8N2E2 1590 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 IFIT2P09913 472 aaKnown RBP10.5□□□□□ -0.73
CLIP1-218ENST00000545889 KIF6Q6ZMV9 814 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 CRBNQ96SW2 442 aa10.5□□□□□ -0.73
CLIP1-218ENST00000545889 RIMS1Q86UR5 1692 aaKnown RBP10.49□□□□□ -0.73
CLIP1-218ENST00000545889 FAM83GA6ND36 823 aa10.49□□□□□ -0.73
CLIP1-218ENST00000545889 TRDNQ13061 729 aa10.49□□□□□ -0.73
CLIP1-218ENST00000545889 NFE2L2Q16236 605 aa10.49□□□□□ -0.73
CLIP1-218ENST00000545889 NEUROD6Q96NK8 337 aa10.49□□□□□ -0.73
CLIP1-218ENST00000545889 KDM4FA0A1W2PPD8 638 aa10.49□□□□□ -0.73
CLIP1-218ENST00000545889 EIF4A2Q14240 407 aaKnown RBP10.49□□□□□ -0.73
CLIP1-218ENST00000545889 PREX1Q8TCU6 1659 aa10.49□□□□□ -0.73
CLIP1-218ENST00000545889 KAT6BQ8WYB5 2073 aa10.49□□□□□ -0.73
CLIP1-218ENST00000545889 BCAR3O75815 825 aa10.49□□□□□ -0.73
CLIP1-218ENST00000545889 NOL8Q76FK4 1167 aaKnown RBP10.49□□□□□ -0.73
CLIP1-218ENST00000545889 DEPDC5O75140 1603 aa10.48□□□□□ -0.73
CLIP1-218ENST00000545889 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-218ENST00000545889 ANKRD24Q8TF21 1146 aa10.48□□□□□ -0.73
CLIP1-218ENST00000545889 CABP4P57796 275 aa10.48□□□□□ -0.73
CLIP1-218ENST00000545889 CHMP4CQ96CF2 233 aa10.48□□□□□ -0.73
CLIP1-218ENST00000545889 DIAPH3Q9NSV4 1193 aa10.48□□□□□ -0.73
CLIP1-218ENST00000545889 NEXMIFQ5QGS0 1516 aa10.48□□□□□ -0.73
CLIP1-218ENST00000545889 BCORL1Q5H9F3 1711 aa10.48□□□□□ -0.73
CLIP1-218ENST00000545889 PANK1Q8TE04 598 aa10.47□□□□□ -0.73
CLIP1-218ENST00000545889 ZNF428Q96B54 188 aa10.47□□□□□ -0.73
CLIP1-218ENST00000545889 ZKSCAN2Q63HK3 967 aa10.47□□□□□ -0.73
CLIP1-218ENST00000545889 KIF16BQ96L93 1317 aa10.47□□□□□ -0.73
CLIP1-218ENST00000545889 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
CLIP1-218ENST00000545889 MPRIPQ6WCQ1 1025 aa10.46□□□□□ -0.73
CLIP1-218ENST00000545889 PRDM10Q9NQV6 1147 aa10.46□□□□□ -0.73
CLIP1-218ENST00000545889 EDC4Q6P2E9 1401 aaKnown RBP10.46□□□□□ -0.73
CLIP1-218ENST00000545889 RRAGDQ9NQL2 400 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-218ENST00000545889 PLCD3Q8N3E9 789 aa10.46□□□□□ -0.74
CLIP1-218ENST00000545889 PHACTR3Q96KR7 559 aa10.46□□□□□ -0.74
CLIP1-218ENST00000545889 SPG7Q9UQ90 795 aa10.46□□□□□ -0.74
CLIP1-218ENST00000545889 API5Q9BZZ5 524 aaKnown RBP10.46□□□□□ -0.74
CLIP1-218ENST00000545889 ZC3H13Q5T200 1668 aaKnown RBP10.45□□□□□ -0.74
CLIP1-218ENST00000545889 TWISTNBQ3B726 338 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-218ENST00000545889 KDM5AP29375 1690 aaKnown RBP10.45□□□□□ -0.74
CLIP1-218ENST00000545889 ERICH2A1L162 156 aa10.45□□□□□ -0.74
CLIP1-218ENST00000545889 CPLX1O14810 134 aa10.45□□□□□ -0.74
CLIP1-218ENST00000545889 SLFN5Q08AF3 891 aa10.45□□□□□ -0.74
CLIP1-218ENST00000545889 FAM184AQ8NB25 1140 aa10.45□□□□□ -0.74
CLIP1-218ENST00000545889 EYA1Q99502 592 aa10.45□□□□□ -0.74
CLIP1-218ENST00000545889 ADAMTS13Q76LX8 1427 aa10.45□□□□□ -0.74
CLIP1-218ENST00000545889 MSNP26038 577 aaKnown RBP10.45□□□□□ -0.74
CLIP1-218ENST00000545889 PES1O00541 588 aaKnown RBP10.44□□□□□ -0.74
CLIP1-218ENST00000545889 RBM5P52756 815 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLIP1-218ENST00000545889 FAM135BQ49AJ0 1406 aa10.44□□□□□ -0.74
CLIP1-218ENST00000545889 MFAP1P55081 439 aaKnown RBP10.44□□□□□ -0.74
CLIP1-218ENST00000545889 WDR63Q8IWG1 891 aa10.44□□□□□ -0.74
CLIP1-218ENST00000545889 RUFY2Q8WXA3 655 aa10.44□□□□□ -0.74
CLIP1-218ENST00000545889 SPATA31D1Q6ZQQ2 1576 aa10.44□□□□□ -0.74
CLIP1-218ENST00000545889 SETD1BQ9UPS6 1966 aaKnown RBP10.44□□□□□ -0.74
CLIP1-218ENST00000545889 GNAT3A8MTJ3 354 aa10.44□□□□□ -0.74
CLIP1-218ENST00000545889 HOXC9P31274 260 aa10.44□□□□□ -0.74
CLIP1-218ENST00000545889 MTMR7Q9Y216 660 aa10.44□□□□□ -0.74
CLIP1-218ENST00000545889 POLR3AO14802 1390 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-218ENST00000545889 TPM4P67936 248 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 WASHC4Q2M389 1173 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 BICDL1Q6ZP65 573 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 NOC3LQ8WTT2 800 aaKnown RBP10.43□□□□□ -0.74
CLIP1-218ENST00000545889 MROH2AA6NES4 1674 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 HSP90AB4PQ58FF6 505 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 ANKRD45Q5TZF3 282 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 PDCL3Q9H2J4 239 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 H3BQV1 296 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 TRIM29Q14134 588 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 IFFO2Q5TF58 517 aa10.43□□□□□ -0.74
CLIP1-218ENST00000545889 DZIP1LQ8IYY4 767 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms