RNA–Protein interactions for RNA: ENST00000545517.2

LRCOL1-204, Transcript of leucine rich colipase like 1, humanhuman

TSL 5

Gene LRCOL1, Length 921 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1-204ENST00000545517 RGPD3A6NKT7 1758 aaPredicted RBP22.22■■□□□ 1.15
LRCOL1-204ENST00000545517 RGPD4Q7Z3J3 1758 aa22.22■■□□□ 1.15
LRCOL1-204ENST00000545517 IL13P35225 146 aa22.2■■□□□ 1.14
LRCOL1-204ENST00000545517 MARCH10Q8NA82 808 aaPredicted RBP22.2■■□□□ 1.14
LRCOL1-204ENST00000545517 RREB1Q92766 1687 aa22.2■■□□□ 1.14
LRCOL1-204ENST00000545517 SCN11AQ9UI33 1791 aa22.2■■□□□ 1.14
LRCOL1-204ENST00000545517 DLG5Q8TDM6 1919 aa22.19■■□□□ 1.14
LRCOL1-204ENST00000545517 EXOC5O00471 708 aa22.17■■□□□ 1.14
LRCOL1-204ENST00000545517 AEBP1Q8IUX7 1158 aa22.17■■□□□ 1.14
LRCOL1-204ENST00000545517 RAPGEF4Q8WZA2 1011 aa22.17■■□□□ 1.14
LRCOL1-204ENST00000545517 KDRP35968 1356 aa22.16■■□□□ 1.14
LRCOL1-204ENST00000545517 NUP188Q5SRE5 1749 aa22.16■■□□□ 1.14
LRCOL1-204ENST00000545517 BCL9O00512 1426 aa22.15■■□□□ 1.14
LRCOL1-204ENST00000545517 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
LRCOL1-204ENST00000545517 TATP17735 454 aaPredicted RBP22.15■■□□□ 1.14
LRCOL1-204ENST00000545517 FAM196AQ6ZSG2 479 aa22.14■■□□□ 1.13
LRCOL1-204ENST00000545517 RALBP1Q15311 655 aa22.13■■□□□ 1.13
LRCOL1-204ENST00000545517 LY75O60449 1722 aa22.12■■□□□ 1.13
LRCOL1-204ENST00000545517 ZCRB1Q8TBF4 217 aaKnown RBP22.12■■□□□ 1.13
LRCOL1-204ENST00000545517 SULT6B1Q6IMI4 303 aa22.11■■□□□ 1.13
LRCOL1-204ENST00000545517 DDX54Q8TDD1 881 aaKnown RBP22.11■■□□□ 1.13
LRCOL1-204ENST00000545517 CFAP53Q96M91 514 aa22.11■■□□□ 1.13
LRCOL1-204ENST00000545517 TRIM37O94972 964 aa22.1■■□□□ 1.13
LRCOL1-204ENST00000545517 PRKRIP1Q9H875 184 aaPredicted RBP22.1■■□□□ 1.13
LRCOL1-204ENST00000545517 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
LRCOL1-204ENST00000545517 PLEKHG2Q9H7P9 1386 aa22.1■■□□□ 1.13
LRCOL1-204ENST00000545517 MYBBP1AQ9BQG0 1328 aaKnown RBP22.09■■□□□ 1.13
LRCOL1-204ENST00000545517 PCDH11XQ9BZA7 1347 aa22.09■■□□□ 1.13
LRCOL1-204ENST00000545517 PCDH11YQ9BZA8 1340 aa22.09■■□□□ 1.13
LRCOL1-204ENST00000545517 HMOX1P09601 288 aa22.09■■□□□ 1.13
LRCOL1-204ENST00000545517 SIPA1L3O60292 1781 aaPredicted RBP22.08■■□□□ 1.13
LRCOL1-204ENST00000545517 PTF1AQ7RTS3 328 aa22.08■■□□□ 1.13
LRCOL1-204ENST00000545517 U2SURPO15042 1029 aaKnown RBP22.07■■□□□ 1.12
LRCOL1-204ENST00000545517 CYP27B1O15528 508 aa22.07■■□□□ 1.12
LRCOL1-204ENST00000545517 TAF1LQ8IZX4 1826 aa22.06■■□□□ 1.12
LRCOL1-204ENST00000545517 CCDC125Q86Z20 511 aa22.06■■□□□ 1.12
LRCOL1-204ENST00000545517 DEFB132Q7Z7B7 95 aa22.05■■□□□ 1.12
LRCOL1-204ENST00000545517 ACSBG1Q96GR2 724 aa22.05■■□□□ 1.12
LRCOL1-204ENST00000545517 SPG7Q9UQ90 795 aa22.04■■□□□ 1.12
LRCOL1-204ENST00000545517 KCNQ2O43526 872 aa22.03■■□□□ 1.12
LRCOL1-204ENST00000545517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.03■■□□□ 1.12
LRCOL1-204ENST00000545517 TUBGCP6Q96RT7 1819 aa22.03■■□□□ 1.12
LRCOL1-204ENST00000545517 SF3B2Q13435 895 aaKnown RBP22.02■■□□□ 1.12
LRCOL1-204ENST00000545517 PAPPAQ13219 1627 aa22.02■■□□□ 1.11
LRCOL1-204ENST00000545517 KDM6AO15550 1401 aaPredicted RBP22.01■■□□□ 1.11
LRCOL1-204ENST00000545517 PHKG2P15735 406 aa22■■□□□ 1.11
LRCOL1-204ENST00000545517 BCL11BQ9C0K0 894 aaPredicted RBP22■■□□□ 1.11
LRCOL1-204ENST00000545517 RSPH6AQ9H0K4 717 aa22■■□□□ 1.11
LRCOL1-204ENST00000545517 C5P01031 1676 aa22■■□□□ 1.11
LRCOL1-204ENST00000545517 BAG6P46379 1132 aa21.99■■□□□ 1.11
LRCOL1-204ENST00000545517 PLEKHO1Q53GL0 409 aaPredicted RBP21.99■■□□□ 1.11
LRCOL1-204ENST00000545517 ZNF530Q6P9A1 599 aaPredicted RBP21.99■■□□□ 1.11
LRCOL1-204ENST00000545517 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
LRCOL1-204ENST00000545517 APBA3O96018 575 aa21.98■■□□□ 1.11
LRCOL1-204ENST00000545517 U2AF1L5P0DN76 240 aaPredicted RBP21.98■■□□□ 1.11
LRCOL1-204ENST00000545517 U2AF1Q01081 240 aaKnown RBP eCLIP21.98■■□□□ 1.11
LRCOL1-204ENST00000545517 EN1Q05925 392 aaPredicted RBP21.98■■□□□ 1.11
LRCOL1-204ENST00000545517 NKX1-1Q15270 411 aaPredicted RBP21.97■■□□□ 1.11
LRCOL1-204ENST00000545517 AMOTQ4VCS5 1084 aa21.97■■□□□ 1.11
LRCOL1-204ENST00000545517 IFNL2Q8IZJ0 200 aa21.97■■□□□ 1.11
LRCOL1-204ENST00000545517 MRC1P22897 1456 aa21.96■■□□□ 1.11
LRCOL1-204ENST00000545517 PRKAR2BP31323 418 aa21.96■■□□□ 1.11
LRCOL1-204ENST00000545517 UBR2Q8IWV8 1755 aa21.96■■□□□ 1.11
LRCOL1-204ENST00000545517 PRIM1P49642 420 aaKnown RBP21.95■■□□□ 1.1
LRCOL1-204ENST00000545517 SYTL4Q96C24 671 aaPredicted RBP21.95■■□□□ 1.1
LRCOL1-204ENST00000545517 EZH2Q15910 746 aaKnown RBP21.94■■□□□ 1.1
LRCOL1-204ENST00000545517 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
LRCOL1-204ENST00000545517 COL5A3P25940 1745 aaPredicted RBP21.94■■□□□ 1.1
LRCOL1-204ENST00000545517 QSER1Q2KHR3 1735 aa21.93■■□□□ 1.1
LRCOL1-204ENST00000545517 CAMKK2Q96RR4 588 aa21.93■■□□□ 1.1
LRCOL1-204ENST00000545517 ZNF831Q5JPB2 1677 aa21.92■■□□□ 1.1
LRCOL1-204ENST00000545517 ANP32CO43423 234 aa21.92■■□□□ 1.1
LRCOL1-204ENST00000545517 CCDC184Q52MB2 194 aa21.92■■□□□ 1.1
LRCOL1-204ENST00000545517 C1orf141Q5JVX7 400 aa21.92■■□□□ 1.1
LRCOL1-204ENST00000545517 PHACTR3Q96KR7 559 aa21.92■■□□□ 1.1
LRCOL1-204ENST00000545517 TJP1Q07157 1748 aa21.91■■□□□ 1.1
LRCOL1-204ENST00000545517 FCHSD2O94868 740 aa21.9■■□□□ 1.1
LRCOL1-204ENST00000545517 MAP3K5Q99683 1374 aa21.89■■□□□ 1.1
LRCOL1-204ENST00000545517 CICQ96RK0 1608 aaPredicted RBP21.89■■□□□ 1.09
LRCOL1-204ENST00000545517 AKAP4Q5JQC9 854 aa21.89■■□□□ 1.09
LRCOL1-204ENST00000545517 MPRIPQ6WCQ1 1025 aa21.89■■□□□ 1.09
LRCOL1-204ENST00000545517 PLSCR1O15162 318 aa21.88■■□□□ 1.09
LRCOL1-204ENST00000545517 DCAF5Q96JK2 942 aa21.88■■□□□ 1.09
LRCOL1-204ENST00000545517 KDM3BQ7LBC6 1761 aa21.88■■□□□ 1.09
LRCOL1-204ENST00000545517 HSP90AB1P08238 724 aaKnown RBP21.87■■□□□ 1.09
LRCOL1-204ENST00000545517 PLEKHF1Q96S99 279 aa21.87■■□□□ 1.09
LRCOL1-204ENST00000545517 UBR3Q6ZT12 1888 aa21.87■■□□□ 1.09
LRCOL1-204ENST00000545517 CASZ1Q86V15 1759 aa21.87■■□□□ 1.09
LRCOL1-204ENST00000545517 C4BP0C0L5 1744 aa21.86■■□□□ 1.09
LRCOL1-204ENST00000545517 PROM2Q8N271 834 aa21.85■■□□□ 1.09
LRCOL1-204ENST00000545517 GAS2L2Q8NHY3 880 aa21.85■■□□□ 1.09
LRCOL1-204ENST00000545517 PIGBQ92521 554 aa21.85■■□□□ 1.09
LRCOL1-204ENST00000545517 LGR6Q9HBX8 967 aa21.84■■□□□ 1.09
LRCOL1-204ENST00000545517 TMOD3Q9NYL9 352 aa21.84■■□□□ 1.09
LRCOL1-204ENST00000545517 PALLDQ8WX93 1383 aa21.84■■□□□ 1.09
LRCOL1-204ENST00000545517 MYH14Q7Z406 1995 aaKnown RBP21.83■■□□□ 1.09
LRCOL1-204ENST00000545517 WDR43Q15061 677 aaKnown RBP eCLIP21.83■■□□□ 1.09
LRCOL1-204ENST00000545517 TXNRD1Q16881 649 aa21.83■■□□□ 1.09
LRCOL1-204ENST00000545517 ERVV-2B6SEH9 535 aa21.82■■□□□ 1.08
LRCOL1-204ENST00000545517 RNMTO43148 476 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms