RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 PNNQ9H307 717 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-214ENST00000545358 C2orf72A6NCS6 295 aa7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 POTEMA6NI47 508 aa7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 APAF1O14727 1248 aa7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 DIAPH1O60610 1272 aaKnown RBP7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 CCDC27Q2M243 656 aa7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 POTEGQ6S5H5 508 aa7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 PCDH10Q9P2E7 1040 aa7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 POLKQ9UBT6 870 aa7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 KIF24Q5T7B8 1368 aa7.17□□□□□ -1.26
NPIPB3-214ENST00000545358 RGPD1P0DJD0 1748 aa7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 PEAK1Q9H792 1746 aa7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 STRCP1A6NGW2 1772 aa7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 E9PSI1 815 aa7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 U2AF1L5P0DN76 240 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 HOXB3P14651 431 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 U2AF1Q01081 240 aaKnown RBP eCLIP7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 DUSP27Q5VZP5 1158 aa7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 NGDNQ8NEJ9 315 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 GPHNQ9NQX3 736 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 RCAN3Q9UKA8 241 aa7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 SALL2Q9Y467 1007 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 MAPK8IP3Q9UPT6 1336 aa7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 PHRF1Q9P1Y6 1649 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-214ENST00000545358 NUTM2FA1L443 756 aa7.15□□□□□ -1.26
NPIPB3-214ENST00000545358 RRP1P56182 461 aaKnown RBP7.15□□□□□ -1.26
NPIPB3-214ENST00000545358 SLFN5Q08AF3 891 aa7.15□□□□□ -1.26
NPIPB3-214ENST00000545358 TRMT2AQ8IZ69 625 aaKnown RBP7.15□□□□□ -1.26
NPIPB3-214ENST00000545358 SPRYD3Q8NCJ5 442 aa7.15□□□□□ -1.26
NPIPB3-214ENST00000545358 CDCA7LQ96GN5 454 aa7.15□□□□□ -1.26
NPIPB3-214ENST00000545358 PLEKHF1Q96S99 279 aa7.15□□□□□ -1.26
NPIPB3-214ENST00000545358 EMILIN1Q9Y6C2 1016 aa7.15□□□□□ -1.26
NPIPB3-214ENST00000545358 RTL1A6NKG5 1358 aa7.15□□□□□ -1.26
NPIPB3-214ENST00000545358 TRPM3Q9HCF6 1732 aaPredicted RBP7.15□□□□□ -1.27
NPIPB3-214ENST00000545358 STRCQ7RTU9 1775 aa7.15□□□□□ -1.27
NPIPB3-214ENST00000545358 SENP3-EIF4A1A0A087X0R7 540 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 SBNO1A3KN83 1393 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 U2SURPO15042 1029 aaKnown RBP7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 SLIT3O75094 1523 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 FCHSD2O94868 740 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 NFAT5O94916 1531 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 SLC34A2O95436 690 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 FLT4P35916 1363 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 FOXK1P85037 733 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 MST1RQ04912 1400 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 WDR63Q8IWG1 891 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 WWC1Q8IX03 1113 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 TCP11L2Q8N4U5 519 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 PMFBP1Q8TBY8 1022 aa7.14□□□□□ -1.27
NPIPB3-214ENST00000545358 C1orf167Q5SNV9 1468 aa7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 ARHGEF10O15013 1369 aa7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 IL16Q14005 1332 aa7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 KDM4FA0A1W2PPD8 638 aa7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 NEFMP07197 916 aa7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 HOXB1P14653 301 aaPredicted RBP7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 PDE4AP27815 886 aa7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 IL13P35225 146 aa7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 RSPH6AQ9H0K4 717 aa7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 PPP4R2Q9NY27 417 aa7.13□□□□□ -1.27
NPIPB3-214ENST00000545358 TMEM94Q12767 1356 aa7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 PPM1GO15355 546 aaPredicted RBP7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 TMPOP42166 694 aaKnown RBP7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 RRS1Q15050 365 aaKnown RBP7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 C14orf37Q86TY3 774 aa7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 PROSER2Q86WR7 435 aaPredicted RBP7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 CRISPLD2Q9H0B8 497 aa7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 C19orf44Q9H6X5 657 aa7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 LTN1O94822 1766 aa7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 ALS2Q96Q42 1657 aa7.12□□□□□ -1.27
NPIPB3-214ENST00000545358 XIRP1Q702N8 1843 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-214ENST00000545358 MAP3K19Q56UN5 1328 aa7.11□□□□□ -1.27
NPIPB3-214ENST00000545358 CT47B1P0C2W7 299 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-214ENST00000545358 EMP3P54852 163 aa7.11□□□□□ -1.27
NPIPB3-214ENST00000545358 IRX6P78412 446 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-214ENST00000545358 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-214ENST00000545358 MYH16Q9H6N6 1097 aa7.11□□□□□ -1.27
NPIPB3-214ENST00000545358 ABCC6O95255 1503 aa7.11□□□□□ -1.27
NPIPB3-214ENST00000545358 MSH6P52701 1360 aa7.1□□□□□ -1.27
NPIPB3-214ENST00000545358 PRKAR2BP31323 418 aa7.1□□□□□ -1.27
NPIPB3-214ENST00000545358 CALD1Q05682 793 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-214ENST00000545358 LMOD3Q0VAK6 560 aa7.1□□□□□ -1.27
NPIPB3-214ENST00000545358 EIF4A2Q14240 407 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-214ENST00000545358 NFE2L2Q16236 605 aa7.1□□□□□ -1.27
NPIPB3-214ENST00000545358 ESCO1Q5FWF5 840 aa7.1□□□□□ -1.27
NPIPB3-214ENST00000545358 RRP7AQ9Y3A4 280 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-214ENST00000545358 MED1Q15648 1581 aaPredicted RBP7.1□□□□□ -1.27
NPIPB3-214ENST00000545358 KDRP35968 1356 aa7.09□□□□□ -1.27
NPIPB3-214ENST00000545358 DLG5Q8TDM6 1919 aa7.09□□□□□ -1.27
NPIPB3-214ENST00000545358 USP19O94966 1318 aa7.09□□□□□ -1.27
NPIPB3-214ENST00000545358 ATF3P18847 181 aa7.09□□□□□ -1.27
NPIPB3-214ENST00000545358 FBLN1P23142 703 aa7.09□□□□□ -1.27
NPIPB3-214ENST00000545358 HSPA2P54652 639 aa7.09□□□□□ -1.27
NPIPB3-214ENST00000545358 CADPS2Q86UW7 1296 aa7.09□□□□□ -1.27
NPIPB3-214ENST00000545358 ABTB2Q8N961 1025 aa7.09□□□□□ -1.27
NPIPB3-214ENST00000545358 CAMTA1Q9Y6Y1 1673 aa7.09□□□□□ -1.27
NPIPB3-214ENST00000545358 LRRC37A3O60309 1634 aa7.09□□□□□ -1.28
NPIPB3-214ENST00000545358 IGSF1Q8N6C5 1336 aa7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 CRYBG1Q9Y4K1 1723 aa7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 AMPHP49418 695 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms