RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 FSTL1Q12841 308 aa10.52□□□□□ -0.73
COPA-207ENST00000545284 KIAA1210Q9ULL0 1709 aa10.52□□□□□ -0.73
COPA-207ENST00000545284 IGSF1Q8N6C5 1336 aa10.52□□□□□ -0.73
COPA-207ENST00000545284 KCNQ4P56696 695 aa10.51□□□□□ -0.73
COPA-207ENST00000545284 CGNL1Q0VF96 1302 aa10.51□□□□□ -0.73
COPA-207ENST00000545284 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
COPA-207ENST00000545284 RAB3GAP2Q9H2M9 1393 aa10.51□□□□□ -0.73
COPA-207ENST00000545284 QRICH2Q9H0J4 1663 aa10.5□□□□□ -0.73
COPA-207ENST00000545284 MSL1Q68DK7 614 aa10.5□□□□□ -0.73
COPA-207ENST00000545284 IP6K1Q92551 441 aa10.5□□□□□ -0.73
COPA-207ENST00000545284 NSD2O96028 1365 aa10.5□□□□□ -0.73
COPA-207ENST00000545284 NSD3Q9BZ95 1437 aa10.5□□□□□ -0.73
COPA-207ENST00000545284 TGFB2P61812 414 aa10.49□□□□□ -0.73
COPA-207ENST00000545284 ZCRB1Q8TBF4 217 aaKnown RBP10.49□□□□□ -0.73
COPA-207ENST00000545284 SSFA2P28290 1259 aa10.47□□□□□ -0.73
COPA-207ENST00000545284 C16orf71Q8IYS4 520 aaPredicted RBP10.47□□□□□ -0.73
COPA-207ENST00000545284 SMARCC1Q92922 1105 aaPredicted RBP10.47□□□□□ -0.73
COPA-207ENST00000545284 CAPN15O75808 1086 aa10.46□□□□□ -0.73
COPA-207ENST00000545284 SLC34A2O95436 690 aa10.46□□□□□ -0.73
COPA-207ENST00000545284 CICQ96RK0 1608 aaPredicted RBP10.46□□□□□ -0.74
COPA-207ENST00000545284 RGPD5Q99666 1765 aa10.45□□□□□ -0.74
COPA-207ENST00000545284 LY75O60449 1722 aa10.45□□□□□ -0.74
COPA-207ENST00000545284 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.45□□□□□ -0.74
COPA-207ENST00000545284 AK7Q96M32 723 aa10.45□□□□□ -0.74
COPA-207ENST00000545284 PCDH10Q9P2E7 1040 aa10.45□□□□□ -0.74
COPA-207ENST00000545284 C10orf71Q711Q0 1435 aa10.44□□□□□ -0.74
COPA-207ENST00000545284 PLEKHG2Q9H7P9 1386 aa10.44□□□□□ -0.74
COPA-207ENST00000545284 SBNO2Q9Y2G9 1366 aa10.44□□□□□ -0.74
COPA-207ENST00000545284 KDM2BQ8NHM5 1336 aa10.44□□□□□ -0.74
COPA-207ENST00000545284 HDGFL2Q7Z4V5 671 aaPredicted RBP10.44□□□□□ -0.74
COPA-207ENST00000545284 NME9Q86XW9 330 aa10.44□□□□□ -0.74
COPA-207ENST00000545284 NMRK2Q9NPI5 230 aa10.44□□□□□ -0.74
COPA-207ENST00000545284 WWC3Q9ULE0 1092 aa10.44□□□□□ -0.74
COPA-207ENST00000545284 PALLDQ8WX93 1383 aa10.43□□□□□ -0.74
COPA-207ENST00000545284 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.43□□□□□ -0.74
COPA-207ENST00000545284 NLGN1Q8N2Q7 840 aa10.42□□□□□ -0.74
COPA-207ENST00000545284 SMC1BQ8NDV3 1235 aa10.42□□□□□ -0.74
COPA-207ENST00000545284 PUS7Q96PZ0 661 aaKnown RBP10.42□□□□□ -0.74
COPA-207ENST00000545284 TERF2IPQ9NYB0 399 aa10.42□□□□□ -0.74
COPA-207ENST00000545284 TUBGCP6Q96RT7 1819 aa10.42□□□□□ -0.74
COPA-207ENST00000545284 EDC4Q6P2E9 1401 aaKnown RBP10.41□□□□□ -0.74
COPA-207ENST00000545284 USP54Q70EL1 1684 aa10.41□□□□□ -0.74
COPA-207ENST00000545284 ARHGAP27Q6ZUM4 889 aa10.41□□□□□ -0.74
COPA-207ENST00000545284 RAPGEF4Q8WZA2 1011 aa10.41□□□□□ -0.74
COPA-207ENST00000545284 BCS1LQ9Y276 419 aa10.41□□□□□ -0.74
COPA-207ENST00000545284 KAT6BQ8WYB5 2073 aa10.4□□□□□ -0.74
COPA-207ENST00000545284 PCDH11XQ9BZA7 1347 aa10.4□□□□□ -0.74
COPA-207ENST00000545284 PCDH11YQ9BZA8 1340 aa10.4□□□□□ -0.74
COPA-207ENST00000545284 ZC3H4Q9UPT8 1303 aaKnown RBP10.4□□□□□ -0.74
COPA-207ENST00000545284 HOXC9P31274 260 aa10.4□□□□□ -0.74
COPA-207ENST00000545284 AMPHP49418 695 aa10.4□□□□□ -0.74
COPA-207ENST00000545284 LTV1Q96GA3 475 aaPredicted RBP10.4□□□□□ -0.74
COPA-207ENST00000545284 WDR90Q96KV7 1748 aa10.4□□□□□ -0.74
COPA-207ENST00000545284 TATP17735 454 aaPredicted RBP10.39□□□□□ -0.75
COPA-207ENST00000545284 C9orf131Q5VYM1 1079 aa10.39□□□□□ -0.75
COPA-207ENST00000545284 MPRIPQ6WCQ1 1025 aa10.39□□□□□ -0.75
COPA-207ENST00000545284 MAP3K19Q56UN5 1328 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 FAM208AQ9UK61 1670 aaKnown RBP10.38□□□□□ -0.75
COPA-207ENST00000545284 PXDNLA1KZ92 1463 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 CD163L1Q9NR16 1453 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 FCHSD2O94868 740 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 MMP10P09238 476 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 HSPA1AP0DMV8 641 aaKnown RBP10.38□□□□□ -0.75
COPA-207ENST00000545284 HSPA1BP0DMV9 641 aaKnown RBP10.38□□□□□ -0.75
COPA-207ENST00000545284 HTRA3P83110 453 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 COG3Q96JB2 828 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 CCDC87Q9NVE4 849 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 RTL1A6NKG5 1358 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 MEGF6O75095 1541 aa10.38□□□□□ -0.75
COPA-207ENST00000545284 LOC102724428A0A0B4J2F2 783 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 A0A0G2JLW4 131 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 PHF14O94880 888 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 ADRA2BP18089 450 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 SIK1P57059 783 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 TMF1P82094 1093 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 NKX1-1Q15270 411 aaPredicted RBP10.37□□□□□ -0.75
COPA-207ENST00000545284 NBPF6Q5VWK0 638 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 AMIGO3Q86WK7 504 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 NBPF4Q96M43 638 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 PIM2Q9P1W9 311 aa10.37□□□□□ -0.75
COPA-207ENST00000545284 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
COPA-207ENST00000545284 TRAPPC3LQ5T215 181 aa10.36□□□□□ -0.75
COPA-207ENST00000545284 TMC1Q8TDI8 760 aa10.36□□□□□ -0.75
COPA-207ENST00000545284 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
COPA-207ENST00000545284 RRAGCQ9HB90 399 aa10.36□□□□□ -0.75
COPA-207ENST00000545284 C5P01031 1676 aa10.36□□□□□ -0.75
COPA-207ENST00000545284 ROCK2O75116 1388 aaKnown RBP10.36□□□□□ -0.75
COPA-207ENST00000545284 DOT1LQ8TEK3 1739 aa10.36□□□□□ -0.75
COPA-207ENST00000545284 PCNTO95613 3336 aa10.35□□□□□ -0.75
COPA-207ENST00000545284 SMG6Q86US8 1419 aaKnown RBP10.35□□□□□ -0.75
COPA-207ENST00000545284 VEGFAP15692 232 aaPredicted RBP10.35□□□□□ -0.75
COPA-207ENST00000545284 DPEP1P16444 411 aa10.35□□□□□ -0.75
COPA-207ENST00000545284 PIGBQ92521 554 aa10.35□□□□□ -0.75
COPA-207ENST00000545284 L3MBTL2Q969R5 705 aa10.35□□□□□ -0.75
COPA-207ENST00000545284 DCAF5Q96JK2 942 aa10.35□□□□□ -0.75
COPA-207ENST00000545284 C4BP0C0L5 1744 aa10.35□□□□□ -0.75
COPA-207ENST00000545284 MON2Q7Z3U7 1717 aa10.35□□□□□ -0.75
COPA-207ENST00000545284 LTN1O94822 1766 aa10.34□□□□□ -0.75
COPA-207ENST00000545284 GNPATO15228 680 aa10.34□□□□□ -0.75
COPA-207ENST00000545284 CYP27B1O15528 508 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms