RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-223ENST00000545153 BCL9O00512 1426 aa19.4■□□□□ 0.7
PTPN6-223ENST00000545153 FAM208AQ9UK61 1670 aaKnown RBP19.39■□□□□ 0.69
PTPN6-223ENST00000545153 IGSF1Q8N6C5 1336 aa19.38■□□□□ 0.69
PTPN6-223ENST00000545153 RGPD2P0DJD1 1756 aa19.37■□□□□ 0.69
PTPN6-223ENST00000545153 SPG7Q9UQ90 795 aa19.37■□□□□ 0.69
PTPN6-223ENST00000545153 WNK3Q9BYP7 1800 aa19.37■□□□□ 0.69
PTPN6-223ENST00000545153 DIAPH1O60610 1272 aaKnown RBP19.36■□□□□ 0.69
PTPN6-223ENST00000545153 PPP2R1AP30153 589 aa19.36■□□□□ 0.69
PTPN6-223ENST00000545153 SULT6B1Q6IMI4 303 aa19.36■□□□□ 0.69
PTPN6-223ENST00000545153 AEBP1Q8IUX7 1158 aa19.36■□□□□ 0.69
PTPN6-223ENST00000545153 NCAPD2Q15021 1401 aa19.35■□□□□ 0.69
PTPN6-223ENST00000545153 CYP27B1O15528 508 aa19.35■□□□□ 0.69
PTPN6-223ENST00000545153 PRIM1P49642 420 aaKnown RBP19.35■□□□□ 0.69
PTPN6-223ENST00000545153 PLSCR1O15162 318 aa19.34■□□□□ 0.69
PTPN6-223ENST00000545153 SYTL4Q96C24 671 aaPredicted RBP19.34■□□□□ 0.69
PTPN6-223ENST00000545153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.34■□□□□ 0.69
PTPN6-223ENST00000545153 PCDH11XQ9BZA7 1347 aa19.33■□□□□ 0.69
PTPN6-223ENST00000545153 PCDH11YQ9BZA8 1340 aa19.33■□□□□ 0.69
PTPN6-223ENST00000545153 RGPD1P0DJD0 1748 aa19.32■□□□□ 0.68
PTPN6-223ENST00000545153 HMOX1P09601 288 aa19.31■□□□□ 0.68
PTPN6-223ENST00000545153 PLEKHO1Q53GL0 409 aaPredicted RBP19.31■□□□□ 0.68
PTPN6-223ENST00000545153 CFAP53Q96M91 514 aa19.31■□□□□ 0.68
PTPN6-223ENST00000545153 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
PTPN6-223ENST00000545153 IFNL2Q8IZJ0 200 aa19.3■□□□□ 0.68
PTPN6-223ENST00000545153 PROM2Q8N271 834 aa19.3■□□□□ 0.68
PTPN6-223ENST00000545153 PHKG2P15735 406 aa19.29■□□□□ 0.68
PTPN6-223ENST00000545153 NKX1-1Q15270 411 aaPredicted RBP19.29■□□□□ 0.68
PTPN6-223ENST00000545153 AMOTQ4VCS5 1084 aa19.29■□□□□ 0.68
PTPN6-223ENST00000545153 PARD3Q8TEW0 1356 aa19.29■□□□□ 0.68
PTPN6-223ENST00000545153 ZNF316A6NFI3 1004 aaPredicted RBP19.28■□□□□ 0.68
PTPN6-223ENST00000545153 TNS1Q9HBL0 1735 aaKnown RBP19.28■□□□□ 0.68
PTPN6-223ENST00000545153 TXNRD1Q16881 649 aa19.27■□□□□ 0.68
PTPN6-223ENST00000545153 PSDA5PKW4 1024 aaPredicted RBP19.26■□□□□ 0.67
PTPN6-223ENST00000545153 NBPF14Q5TI25 921 aa19.26■□□□□ 0.67
PTPN6-223ENST00000545153 MPRIPQ6WCQ1 1025 aa19.26■□□□□ 0.67
PTPN6-223ENST00000545153 KDRP35968 1356 aa19.26■□□□□ 0.67
PTPN6-223ENST00000545153 R3HDM1Q15032 1099 aaKnown RBP19.25■□□□□ 0.67
PTPN6-223ENST00000545153 RALBP1Q15311 655 aa19.25■□□□□ 0.67
PTPN6-223ENST00000545153 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
PTPN6-223ENST00000545153 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
PTPN6-223ENST00000545153 COL3A1P02461 1466 aaPredicted RBP19.23■□□□□ 0.67
PTPN6-223ENST00000545153 SBF2Q86WG5 1849 aa19.23■□□□□ 0.67
PTPN6-223ENST00000545153 PLEKHG2Q9H7P9 1386 aa19.22■□□□□ 0.67
PTPN6-223ENST00000545153 C1orf141Q5JVX7 400 aa19.22■□□□□ 0.67
PTPN6-223ENST00000545153 HSP90AB1P08238 724 aaKnown RBP19.21■□□□□ 0.67
PTPN6-223ENST00000545153 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
PTPN6-223ENST00000545153 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.67
PTPN6-223ENST00000545153 PIGBQ92521 554 aa19.21■□□□□ 0.67
PTPN6-223ENST00000545153 SHANK3Q9BYB0 1731 aa19.2■□□□□ 0.66
PTPN6-223ENST00000545153 MTHFSDQ2M296 383 aaKnown RBP19.2■□□□□ 0.66
PTPN6-223ENST00000545153 DCAF5Q96JK2 942 aa19.2■□□□□ 0.66
PTPN6-223ENST00000545153 NHSQ6T4R5 1651 aa19.2■□□□□ 0.66
PTPN6-223ENST00000545153 LRRC4BQ9NT99 713 aa19.19■□□□□ 0.66
PTPN6-223ENST00000545153 TMOD3Q9NYL9 352 aa19.19■□□□□ 0.66
PTPN6-223ENST00000545153 ERVV-2B6SEH9 535 aa19.18■□□□□ 0.66
PTPN6-223ENST00000545153 KCNQ4P56696 695 aa19.18■□□□□ 0.66
PTPN6-223ENST00000545153 AKAP4Q5JQC9 854 aa19.18■□□□□ 0.66
PTPN6-223ENST00000545153 PKD1L3Q7Z443 1732 aa19.17■□□□□ 0.66
PTPN6-223ENST00000545153 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
PTPN6-223ENST00000545153 SLC27A3Q5K4L6 730 aa19.17■□□□□ 0.66
PTPN6-223ENST00000545153 RSPH6AQ9H0K4 717 aa19.17■□□□□ 0.66
PTPN6-223ENST00000545153 ANO8Q9HCE9 1232 aaPredicted RBP19.17■□□□□ 0.66
PTPN6-223ENST00000545153 CABP4P57796 275 aa19.16■□□□□ 0.66
PTPN6-223ENST00000545153 PHACTR3Q96KR7 559 aa19.16■□□□□ 0.66
PTPN6-223ENST00000545153 LGR6Q9HBX8 967 aa19.16■□□□□ 0.66
PTPN6-223ENST00000545153 STK32BQ9NY57 414 aa19.16■□□□□ 0.66
PTPN6-223ENST00000545153 FCHSD2O94868 740 aa19.15■□□□□ 0.66
PTPN6-223ENST00000545153 SMARCC1Q92922 1105 aaPredicted RBP19.15■□□□□ 0.66
PTPN6-223ENST00000545153 PRKRIP1Q9H875 184 aaPredicted RBP19.15■□□□□ 0.66
PTPN6-223ENST00000545153 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
PTPN6-223ENST00000545153 ASAP1Q9ULH1 1129 aa19.15■□□□□ 0.66
PTPN6-223ENST00000545153 MYBBP1AQ9BQG0 1328 aaKnown RBP19.15■□□□□ 0.66
PTPN6-223ENST00000545153 SLC15A2Q16348 729 aa19.14■□□□□ 0.65
PTPN6-223ENST00000545153 NFATC2IPQ8NCF5 419 aa19.14■□□□□ 0.65
PTPN6-223ENST00000545153 DOT1LQ8TEK3 1739 aa19.14■□□□□ 0.65
PTPN6-223ENST00000545153 ATG3Q9NT62 314 aa19.13■□□□□ 0.65
PTPN6-223ENST00000545153 KAT6BQ8WYB5 2073 aa19.12■□□□□ 0.65
PTPN6-223ENST00000545153 BTAF1O14981 1849 aa19.12■□□□□ 0.65
PTPN6-223ENST00000545153 KDM6AO15550 1401 aaPredicted RBP19.12■□□□□ 0.65
PTPN6-223ENST00000545153 PALLDQ8WX93 1383 aa19.12■□□□□ 0.65
PTPN6-223ENST00000545153 RNMTO43148 476 aaKnown RBP19.12■□□□□ 0.65
PTPN6-223ENST00000545153 GAS2L2Q8NHY3 880 aa19.12■□□□□ 0.65
PTPN6-223ENST00000545153 RREB1Q92766 1687 aa19.11■□□□□ 0.65
PTPN6-223ENST00000545153 ZNF827Q17R98 1081 aa19.1■□□□□ 0.65
PTPN6-223ENST00000545153 NUP188Q5SRE5 1749 aa19.09■□□□□ 0.65
PTPN6-223ENST00000545153 GNAT3A8MTJ3 354 aa19.09■□□□□ 0.65
PTPN6-223ENST00000545153 AKT1S1Q96B36 256 aa19.09■□□□□ 0.65
PTPN6-223ENST00000545153 PDGFDQ9GZP0 370 aaPredicted RBP19.09■□□□□ 0.65
PTPN6-223ENST00000545153 RGPD3A6NKT7 1758 aaPredicted RBP19.09■□□□□ 0.65
PTPN6-223ENST00000545153 RGPD4Q7Z3J3 1758 aa19.09■□□□□ 0.65
PTPN6-223ENST00000545153 LOC102724428A0A0B4J2F2 783 aa19.08■□□□□ 0.64
PTPN6-223ENST00000545153 SIK1P57059 783 aa19.08■□□□□ 0.64
PTPN6-223ENST00000545153 IL17REQ8NFR9 667 aa19.08■□□□□ 0.64
PTPN6-223ENST00000545153 SLC52A2Q9HAB3 445 aa19.08■□□□□ 0.64
PTPN6-223ENST00000545153 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.64
PTPN6-223ENST00000545153 RBM42Q9BTD8 480 aaKnown RBP19.07■□□□□ 0.64
PTPN6-223ENST00000545153 SRCAPQ6ZRS2 3230 aa19.07■□□□□ 0.64
PTPN6-223ENST00000545153 NEFMP07197 916 aa19.06■□□□□ 0.64
PTPN6-223ENST00000545153 ATP6V1AP38606 617 aa19.06■□□□□ 0.64
PTPN6-223ENST00000545153 PNNQ9H307 717 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms