RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
PDCD2-212ENST00000544755 MTHFSP49914 203 aa20.62■□□□□ 0.89
PDCD2-212ENST00000544755 BCL11BQ9C0K0 894 aaPredicted RBP20.62■□□□□ 0.89
PDCD2-212ENST00000544755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.62■□□□□ 0.89
PDCD2-212ENST00000544755 PCDH11XQ9BZA7 1347 aa20.61■□□□□ 0.89
PDCD2-212ENST00000544755 PCDH11YQ9BZA8 1340 aa20.61■□□□□ 0.89
PDCD2-212ENST00000544755 USHBP1Q8N6Y0 703 aa20.6■□□□□ 0.89
PDCD2-212ENST00000544755 SPG7Q9UQ90 795 aa20.6■□□□□ 0.89
PDCD2-212ENST00000544755 CFAP53Q96M91 514 aa20.59■□□□□ 0.89
PDCD2-212ENST00000544755 APBA3O96018 575 aa20.58■□□□□ 0.89
PDCD2-212ENST00000544755 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.89
PDCD2-212ENST00000544755 DIAPH1O60610 1272 aaKnown RBP20.56■□□□□ 0.88
PDCD2-212ENST00000544755 DEFB132Q7Z7B7 95 aa20.56■□□□□ 0.88
PDCD2-212ENST00000544755 KAT6BQ8WYB5 2073 aa20.56■□□□□ 0.88
PDCD2-212ENST00000544755 KDRP35968 1356 aa20.56■□□□□ 0.88
PDCD2-212ENST00000544755 PLSCR1O15162 318 aa20.55■□□□□ 0.88
PDCD2-212ENST00000544755 IL13P35225 146 aa20.55■□□□□ 0.88
PDCD2-212ENST00000544755 RREB1Q92766 1687 aa20.54■□□□□ 0.88
PDCD2-212ENST00000544755 DOT1LQ8TEK3 1739 aa20.54■□□□□ 0.88
PDCD2-212ENST00000544755 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
PDCD2-212ENST00000544755 EN1Q05925 392 aaPredicted RBP20.53■□□□□ 0.88
PDCD2-212ENST00000544755 COL3A1P02461 1466 aaPredicted RBP20.52■□□□□ 0.88
PDCD2-212ENST00000544755 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.88
PDCD2-212ENST00000544755 RALBP1Q15311 655 aa20.52■□□□□ 0.88
PDCD2-212ENST00000544755 PLEKHO1Q53GL0 409 aaPredicted RBP20.52■□□□□ 0.88
PDCD2-212ENST00000544755 CAMKK2Q96RR4 588 aa20.52■□□□□ 0.88
PDCD2-212ENST00000544755 BTAF1O14981 1849 aa20.52■□□□□ 0.88
PDCD2-212ENST00000544755 HMGB2P26583 209 aaKnown RBP20.51■□□□□ 0.87
PDCD2-212ENST00000544755 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
PDCD2-212ENST00000544755 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
PDCD2-212ENST00000544755 NUDCQ9Y266 331 aa20.51■□□□□ 0.87
PDCD2-212ENST00000544755 HSP90AB1P08238 724 aaKnown RBP20.5■□□□□ 0.87
PDCD2-212ENST00000544755 SULT6B1Q6IMI4 303 aa20.5■□□□□ 0.87
PDCD2-212ENST00000544755 IFNL2Q8IZJ0 200 aa20.5■□□□□ 0.87
PDCD2-212ENST00000544755 NKX1-1Q15270 411 aaPredicted RBP20.49■□□□□ 0.87
PDCD2-212ENST00000544755 CYP27B1O15528 508 aa20.48■□□□□ 0.87
PDCD2-212ENST00000544755 NUP188Q5SRE5 1749 aa20.47■□□□□ 0.87
PDCD2-212ENST00000544755 EZH2Q15910 746 aaKnown RBP20.47■□□□□ 0.87
PDCD2-212ENST00000544755 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
PDCD2-212ENST00000544755 NBPF14Q5TI25 921 aa20.46■□□□□ 0.87
PDCD2-212ENST00000544755 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
PDCD2-212ENST00000544755 KCNQ2O43526 872 aa20.45■□□□□ 0.86
PDCD2-212ENST00000544755 PHKG2P15735 406 aa20.45■□□□□ 0.86
PDCD2-212ENST00000544755 SYTL4Q96C24 671 aaPredicted RBP20.45■□□□□ 0.86
PDCD2-212ENST00000544755 ITGB4P16144 1822 aa20.44■□□□□ 0.86
PDCD2-212ENST00000544755 PRIM1P49642 420 aaKnown RBP20.44■□□□□ 0.86
PDCD2-212ENST00000544755 C1orf141Q5JVX7 400 aa20.44■□□□□ 0.86
PDCD2-212ENST00000544755 AEBP1Q8IUX7 1158 aa20.44■□□□□ 0.86
PDCD2-212ENST00000544755 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
PDCD2-212ENST00000544755 TOGARAM1Q9Y4F4 1720 aa20.42■□□□□ 0.86
PDCD2-212ENST00000544755 ZNF530Q6P9A1 599 aaPredicted RBP20.42■□□□□ 0.86
PDCD2-212ENST00000544755 DCAF5Q96JK2 942 aa20.42■□□□□ 0.86
PDCD2-212ENST00000544755 LY75O60449 1722 aa20.41■□□□□ 0.86
PDCD2-212ENST00000544755 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
PDCD2-212ENST00000544755 SLC27A3Q5K4L6 730 aa20.41■□□□□ 0.86
PDCD2-212ENST00000544755 PTF1AQ7RTS3 328 aa20.41■□□□□ 0.86
PDCD2-212ENST00000544755 MYBBP1AQ9BQG0 1328 aaKnown RBP20.41■□□□□ 0.86
PDCD2-212ENST00000544755 ERVV-2B6SEH9 535 aa20.4■□□□□ 0.86
PDCD2-212ENST00000544755 HMOX1P09601 288 aa20.4■□□□□ 0.86
PDCD2-212ENST00000544755 SMARCC1Q92922 1105 aaPredicted RBP20.4■□□□□ 0.86
PDCD2-212ENST00000544755 AKAP4Q5JQC9 854 aa20.38■□□□□ 0.85
PDCD2-212ENST00000544755 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
PDCD2-212ENST00000544755 TMOD3Q9NYL9 352 aa20.38■□□□□ 0.85
PDCD2-212ENST00000544755 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
PDCD2-212ENST00000544755 FCHSD2O94868 740 aa20.37■□□□□ 0.85
PDCD2-212ENST00000544755 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
PDCD2-212ENST00000544755 NEFMP07197 916 aa20.36■□□□□ 0.85
PDCD2-212ENST00000544755 U2AF1L5P0DN76 240 aaPredicted RBP20.36■□□□□ 0.85
PDCD2-212ENST00000544755 U2AF1Q01081 240 aaKnown RBP eCLIP20.36■□□□□ 0.85
PDCD2-212ENST00000544755 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
PDCD2-212ENST00000544755 PROM2Q8N271 834 aa20.35■□□□□ 0.85
PDCD2-212ENST00000544755 PRKRIP1Q9H875 184 aaPredicted RBP20.34■□□□□ 0.85
PDCD2-212ENST00000544755 PAPPAQ13219 1627 aa20.34■□□□□ 0.85
PDCD2-212ENST00000544755 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
PDCD2-212ENST00000544755 ADAMTS7Q9UKP4 1686 aa20.33■□□□□ 0.85
PDCD2-212ENST00000544755 RSPH6AQ9H0K4 717 aa20.33■□□□□ 0.85
PDCD2-212ENST00000544755 STK32BQ9NY57 414 aa20.33■□□□□ 0.85
PDCD2-212ENST00000544755 KDM6AO15550 1401 aaPredicted RBP20.33■□□□□ 0.84
PDCD2-212ENST00000544755 PALLDQ8WX93 1383 aa20.33■□□□□ 0.84
PDCD2-212ENST00000544755 CABP4P57796 275 aa20.32■□□□□ 0.84
PDCD2-212ENST00000544755 PIGBQ92521 554 aa20.32■□□□□ 0.84
PDCD2-212ENST00000544755 ZNF831Q5JPB2 1677 aa20.32■□□□□ 0.84
PDCD2-212ENST00000544755 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
PDCD2-212ENST00000544755 R3HDM1Q15032 1099 aaKnown RBP20.31■□□□□ 0.84
PDCD2-212ENST00000544755 MTHFSDQ2M296 383 aaKnown RBP20.31■□□□□ 0.84
PDCD2-212ENST00000544755 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
PDCD2-212ENST00000544755 CCNL1Q9UK58 526 aaPredicted RBP20.3■□□□□ 0.84
PDCD2-212ENST00000544755 MAP3K5Q99683 1374 aa20.3■□□□□ 0.84
PDCD2-212ENST00000544755 MRC1P22897 1456 aa20.3■□□□□ 0.84
PDCD2-212ENST00000544755 C5P01031 1676 aa20.29■□□□□ 0.84
PDCD2-212ENST00000544755 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
PDCD2-212ENST00000544755 SLC15A2Q16348 729 aa20.28■□□□□ 0.84
PDCD2-212ENST00000544755 LRP5O75197 1615 aa20.27■□□□□ 0.84
PDCD2-212ENST00000544755 TAF1LQ8IZX4 1826 aa20.27■□□□□ 0.84
PDCD2-212ENST00000544755 PSDA5PKW4 1024 aaPredicted RBP20.27■□□□□ 0.84
PDCD2-212ENST00000544755 RNMTO43148 476 aaKnown RBP20.25■□□□□ 0.83
PDCD2-212ENST00000544755 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
PDCD2-212ENST00000544755 SLC52A2Q9HAB3 445 aa20.25■□□□□ 0.83
PDCD2-212ENST00000544755 ANO8Q9HCE9 1232 aaPredicted RBP20.25■□□□□ 0.83
PDCD2-212ENST00000544755 LRRC4BQ9NT99 713 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms