RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 RABEP1Q15276 862 aa16.15■□□□□ 0.18
CPSF7-223ENST00000544669 TBC1D9Q6ZT07 1266 aa16.15■□□□□ 0.18
CPSF7-223ENST00000544669 PTPRUQ92729 1446 aa16.15■□□□□ 0.18
CPSF7-223ENST00000544669 GOLGA6L3A6NEY3 463 aa16.15■□□□□ 0.18
CPSF7-223ENST00000544669 K7ELQ4 463 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-223ENST00000544669 SLIT1O75093 1534 aa16.14■□□□□ 0.18
CPSF7-223ENST00000544669 KDRP35968 1356 aa16.14■□□□□ 0.17
CPSF7-223ENST00000544669 ANKARQ7Z5J8 1434 aa16.14■□□□□ 0.17
CPSF7-223ENST00000544669 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
CPSF7-223ENST00000544669 GOLGA6L22H0YM25 854 aa16.14■□□□□ 0.17
CPSF7-223ENST00000544669 DDIT3P35638 169 aa16.14■□□□□ 0.17
CPSF7-223ENST00000544669 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
CPSF7-223ENST00000544669 TTC22Q5TAA0 569 aa16.13■□□□□ 0.17
CPSF7-223ENST00000544669 PLEKHM2Q8IWE5 1019 aa16.13■□□□□ 0.17
CPSF7-223ENST00000544669 FAM43AQ8N2R8 423 aa16.13■□□□□ 0.17
CPSF7-223ENST00000544669 STK31Q9BXU1 1019 aa16.13■□□□□ 0.17
CPSF7-223ENST00000544669 ARHGAP23Q9P227 1491 aa16.13■□□□□ 0.17
CPSF7-223ENST00000544669 TRAK2O60296 914 aa16.12■□□□□ 0.17
CPSF7-223ENST00000544669 REC8O95072 547 aa16.12■□□□□ 0.17
CPSF7-223ENST00000544669 C1orf115Q9H7X2 142 aa16.12■□□□□ 0.17
CPSF7-223ENST00000544669 AMOTL2Q9Y2J4 779 aa16.12■□□□□ 0.17
CPSF7-223ENST00000544669 RTL1A6NKG5 1358 aa16.12■□□□□ 0.17
CPSF7-223ENST00000544669 DLG5Q8TDM6 1919 aa16.12■□□□□ 0.17
CPSF7-223ENST00000544669 CRB1P82279 1406 aa16.12■□□□□ 0.17
CPSF7-223ENST00000544669 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
CPSF7-223ENST00000544669 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
CPSF7-223ENST00000544669 RGPD1P0DJD0 1748 aa16.11■□□□□ 0.17
CPSF7-223ENST00000544669 AMPHP49418 695 aa16.11■□□□□ 0.17
CPSF7-223ENST00000544669 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
CPSF7-223ENST00000544669 HSP90AB2PQ58FF8 381 aa16.11■□□□□ 0.17
CPSF7-223ENST00000544669 CEP85Q6P2H3 762 aa16.11■□□□□ 0.17
CPSF7-223ENST00000544669 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
CPSF7-223ENST00000544669 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 GNAI3P08754 354 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 LTKP29376 864 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 MRE11P49959 708 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 AEBP1Q8IUX7 1158 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 IGSF1Q8N6C5 1336 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 RAB3GAP1Q15042 981 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 CCDC30Q5VVM6 783 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
CPSF7-223ENST00000544669 CWC22Q9HCG8 908 aaKnown RBP16.1■□□□□ 0.17
CPSF7-223ENST00000544669 CLEC17AQ6ZS10 378 aa16.09■□□□□ 0.17
CPSF7-223ENST00000544669 MCM10Q7L590 875 aa16.09■□□□□ 0.17
CPSF7-223ENST00000544669 BRPF3Q9ULD4 1205 aa16.09■□□□□ 0.17
CPSF7-223ENST00000544669 MAP3K19Q56UN5 1328 aa16.09■□□□□ 0.17
CPSF7-223ENST00000544669 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
CPSF7-223ENST00000544669 FSD2A1L4K1 749 aa16.08■□□□□ 0.17
CPSF7-223ENST00000544669 NUCB2P80303 420 aa16.08■□□□□ 0.17
CPSF7-223ENST00000544669 RGS12O14924 1447 aa16.08■□□□□ 0.16
CPSF7-223ENST00000544669 ATP10DQ9P241 1426 aa16.08■□□□□ 0.16
CPSF7-223ENST00000544669 ST18O60284 1047 aa16.08■□□□□ 0.16
CPSF7-223ENST00000544669 GNAI2P04899 355 aa16.08■□□□□ 0.16
CPSF7-223ENST00000544669 SPRYD3Q8NCJ5 442 aa16.08■□□□□ 0.16
CPSF7-223ENST00000544669 KIF2CQ99661 725 aa16.08■□□□□ 0.16
CPSF7-223ENST00000544669 EPB41L2O43491 1005 aaKnown RBP16.07■□□□□ 0.16
CPSF7-223ENST00000544669 GNAT3A8MTJ3 354 aa16.06■□□□□ 0.16
CPSF7-223ENST00000544669 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
CPSF7-223ENST00000544669 SRCIN1Q9C0H9 1055 aa16.06■□□□□ 0.16
CPSF7-223ENST00000544669 RIMS1Q86UR5 1692 aaKnown RBP16.05■□□□□ 0.16
CPSF7-223ENST00000544669 GSPT1P15170 499 aaKnown RBP16.05■□□□□ 0.16
CPSF7-223ENST00000544669 MCM2P49736 904 aa16.05■□□□□ 0.16
CPSF7-223ENST00000544669 SLC26A8Q96RN1 970 aa16.05■□□□□ 0.16
CPSF7-223ENST00000544669 USP26Q9BXU7 913 aa16.05■□□□□ 0.16
CPSF7-223ENST00000544669 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
CPSF7-223ENST00000544669 MSH6P52701 1360 aa16.04■□□□□ 0.16
CPSF7-223ENST00000544669 ERC2O15083 957 aa16.03■□□□□ 0.16
CPSF7-223ENST00000544669 EYA1Q99502 592 aa16.03■□□□□ 0.16
CPSF7-223ENST00000544669 MCCP23508 829 aa16.03■□□□□ 0.16
CPSF7-223ENST00000544669 NLRP6P59044 892 aa16.03■□□□□ 0.16
CPSF7-223ENST00000544669 PEAK1Q9H792 1746 aa16.02■□□□□ 0.16
CPSF7-223ENST00000544669 TAF7Q15545 349 aaPredicted RBP16.02■□□□□ 0.16
CPSF7-223ENST00000544669 MEIS3Q99687 375 aa16.02■□□□□ 0.16
CPSF7-223ENST00000544669 PXDNLA1KZ92 1463 aa16.02■□□□□ 0.15
CPSF7-223ENST00000544669 AOX1Q06278 1338 aa16.01■□□□□ 0.15
CPSF7-223ENST00000544669 HOXB7P09629 217 aa16.01■□□□□ 0.15
CPSF7-223ENST00000544669 SDSP20132 328 aa16.01■□□□□ 0.15
CPSF7-223ENST00000544669 HDAC5Q9UQL6 1122 aa16.01■□□□□ 0.15
CPSF7-223ENST00000544669 LRRCC1Q9C099 1032 aa16.01■□□□□ 0.15
CPSF7-223ENST00000544669 MAP3K5Q99683 1374 aa16■□□□□ 0.15
CPSF7-223ENST00000544669 IBTKQ9P2D0 1353 aaPredicted RBP16■□□□□ 0.15
CPSF7-223ENST00000544669 HOXC9P31274 260 aa16■□□□□ 0.15
CPSF7-223ENST00000544669 ATP8B2P98198 1209 aa16■□□□□ 0.15
CPSF7-223ENST00000544669 FMN2Q9NZ56 1722 aa16■□□□□ 0.15
CPSF7-223ENST00000544669 NUTM2FA1L443 756 aa15.99■□□□□ 0.15
CPSF7-223ENST00000544669 ANAPC15P60006 121 aa15.99■□□□□ 0.15
CPSF7-223ENST00000544669 FLIIQ13045 1269 aa15.99■□□□□ 0.15
CPSF7-223ENST00000544669 SLC4A10Q6U841 1118 aa15.99■□□□□ 0.15
CPSF7-223ENST00000544669 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
CPSF7-223ENST00000544669 RAB11FIP3O75154 756 aa15.98■□□□□ 0.15
CPSF7-223ENST00000544669 PDE1AP54750 535 aa15.98■□□□□ 0.15
CPSF7-223ENST00000544669 XRCC6P12956 609 aaKnown RBP eCLIP15.98■□□□□ 0.15
CPSF7-223ENST00000544669 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
CPSF7-223ENST00000544669 KRT24Q2M2I5 525 aa15.98■□□□□ 0.15
CPSF7-223ENST00000544669 KCNH5Q8NCM2 988 aa15.98■□□□□ 0.15
CPSF7-223ENST00000544669 ANP32BQ92688 251 aaKnown RBP15.97■□□□□ 0.15
CPSF7-223ENST00000544669 GRPEL1Q9HAV7 217 aa15.97■□□□□ 0.15
CPSF7-223ENST00000544669 XRN1Q8IZH2 1706 aaKnown RBP15.97■□□□□ 0.15
CPSF7-223ENST00000544669 ADGRL3Q9HAR2 1447 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms