RNA–Protein interactions for RNA: ENST00000543134.5

SEC23IP-208, Transcript of SEC23 interacting protein, humanhuman

TSL 5 BASIC

Gene SEC23IP, Length 1,461 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-208ENST00000543134 CHD4Q14839 1912 aa9.65□□□□□ -0.87
SEC23IP-208ENST00000543134 KCNQ2O43526 872 aa9.65□□□□□ -0.87
SEC23IP-208ENST00000543134 HS6ST3Q8IZP7 471 aa9.65□□□□□ -0.87
SEC23IP-208ENST00000543134 USP6P35125 1406 aa9.64□□□□□ -0.87
SEC23IP-208ENST00000543134 TNS1Q9HBL0 1735 aaKnown RBP9.64□□□□□ -0.87
SEC23IP-208ENST00000543134 SPATA31A3Q5VYP0 1347 aa9.64□□□□□ -0.87
SEC23IP-208ENST00000543134 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
SEC23IP-208ENST00000543134 COL3A1P02461 1466 aaPredicted RBP9.64□□□□□ -0.87
SEC23IP-208ENST00000543134 APBA3O96018 575 aa9.64□□□□□ -0.87
SEC23IP-208ENST00000543134 PSME1Q06323 249 aa9.64□□□□□ -0.87
SEC23IP-208ENST00000543134 AATKQ6ZMQ8 1374 aa9.63□□□□□ -0.87
SEC23IP-208ENST00000543134 TTC21BQ7Z4L5 1316 aa9.63□□□□□ -0.87
SEC23IP-208ENST00000543134 FAM182BQ5T319 152 aa9.63□□□□□ -0.87
SEC23IP-208ENST00000543134 FAM196AQ6ZSG2 479 aa9.63□□□□□ -0.87
SEC23IP-208ENST00000543134 CAMKK2Q96RR4 588 aa9.63□□□□□ -0.87
SEC23IP-208ENST00000543134 SLC24A3Q9HC58 644 aa9.63□□□□□ -0.87
SEC23IP-208ENST00000543134 TRIM37O94972 964 aa9.62□□□□□ -0.87
SEC23IP-208ENST00000543134 HSP90B1P14625 803 aaKnown RBP9.62□□□□□ -0.87
SEC23IP-208ENST00000543134 TNNT2P45379 298 aaPredicted RBP9.62□□□□□ -0.87
SEC23IP-208ENST00000543134 WDR43Q15061 677 aaKnown RBP eCLIP9.62□□□□□ -0.87
SEC23IP-208ENST00000543134 NME9Q86XW9 330 aa9.62□□□□□ -0.87
SEC23IP-208ENST00000543134 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.62□□□□□ -0.87
SEC23IP-208ENST00000543134 TTC21AQ8NDW8 1320 aa9.62□□□□□ -0.87
SEC23IP-208ENST00000543134 SMG6Q86US8 1419 aaKnown RBP9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 KIF1AQ12756 1690 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 CAMTA1Q9Y6Y1 1673 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 NUTM2FA1L443 756 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 PDE3BQ13370 1112 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 KRT28Q7Z3Y7 464 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 CREBZFQ9NS37 354 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 POLKQ9UBT6 870 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 USP31Q70CQ4 1352 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 CEP350Q5VT06 3117 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 OVOS2A0A0J9YW53 1432 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 TNS3Q68CZ2 1445 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 OVOS2Q6IE36 1432 aa9.61□□□□□ -0.87
SEC23IP-208ENST00000543134 NGEFQ8N5V2 710 aa9.6□□□□□ -0.87
SEC23IP-208ENST00000543134 KCTD17Q8N5Z5 321 aa9.6□□□□□ -0.87
SEC23IP-208ENST00000543134 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
SEC23IP-208ENST00000543134 CFAP53Q96M91 514 aa9.6□□□□□ -0.87
SEC23IP-208ENST00000543134 ARHGEF10O15013 1369 aa9.6□□□□□ -0.87
SEC23IP-208ENST00000543134 PIK3C2AO00443 1686 aa9.6□□□□□ -0.87
SEC23IP-208ENST00000543134 ZNF521Q96K83 1311 aa9.6□□□□□ -0.87
SEC23IP-208ENST00000543134 PMFBP1Q8TBY8 1022 aa9.59□□□□□ -0.87
SEC23IP-208ENST00000543134 COG3Q96JB2 828 aa9.59□□□□□ -0.87
SEC23IP-208ENST00000543134 BTG4Q9NY30 223 aa9.59□□□□□ -0.87
SEC23IP-208ENST00000543134 APBB1O00213 710 aa9.59□□□□□ -0.87
SEC23IP-208ENST00000543134 NGDNQ8NEJ9 315 aaKnown RBP9.59□□□□□ -0.87
SEC23IP-208ENST00000543134 ZC3H15Q8WU90 426 aaKnown RBP9.59□□□□□ -0.87
SEC23IP-208ENST00000543134 PHF8Q9UPP1 1060 aa9.59□□□□□ -0.87
SEC23IP-208ENST00000543134 RREB1Q92766 1687 aa9.58□□□□□ -0.88
SEC23IP-208ENST00000543134 FAM83GA6ND36 823 aa9.58□□□□□ -0.88
SEC23IP-208ENST00000543134 RAD21O60216 631 aa9.58□□□□□ -0.88
SEC23IP-208ENST00000543134 NUDCQ9Y266 331 aa9.58□□□□□ -0.88
SEC23IP-208ENST00000543134 NUP188Q5SRE5 1749 aa9.58□□□□□ -0.88
SEC23IP-208ENST00000543134 FBLN1P23142 703 aa9.57□□□□□ -0.88
SEC23IP-208ENST00000543134 RUNDC1Q96C34 613 aa9.57□□□□□ -0.88
SEC23IP-208ENST00000543134 NRAPQ86VF7 1730 aa9.56□□□□□ -0.88
SEC23IP-208ENST00000543134 GTPBP6O43824 516 aaPredicted RBP9.56□□□□□ -0.88
SEC23IP-208ENST00000543134 ABCA3Q99758 1704 aa9.56□□□□□ -0.88
SEC23IP-208ENST00000543134 PEAK1Q9H792 1746 aa9.56□□□□□ -0.88
SEC23IP-208ENST00000543134 TRPM3Q9HCF6 1732 aaPredicted RBP9.56□□□□□ -0.88
SEC23IP-208ENST00000543134 SPATA31A5Q5VU36 1347 aa9.56□□□□□ -0.88
SEC23IP-208ENST00000543134 SPATA31A7Q8IWB4 1347 aa9.56□□□□□ -0.88
SEC23IP-208ENST00000543134 COL14A1Q05707 1796 aaKnown RBP9.56□□□□□ -0.88
SEC23IP-208ENST00000543134 APAF1O14727 1248 aa9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 DIAPH1O60610 1272 aaKnown RBP9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 MNX1P50219 401 aaPredicted RBP9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 CCDC146Q8IYE0 955 aa9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 TRMT2AQ8IZ69 625 aaKnown RBP9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 PLEKHF1Q96S99 279 aa9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 EMILIN1Q9Y6C2 1016 aa9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 THSD7AQ9UPZ6 1657 aa9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 SBNO1A3KN83 1393 aa9.55□□□□□ -0.88
SEC23IP-208ENST00000543134 IL13P35225 146 aa9.54□□□□□ -0.88
SEC23IP-208ENST00000543134 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
SEC23IP-208ENST00000543134 UTRNP46939 3433 aa9.54□□□□□ -0.88
SEC23IP-208ENST00000543134 FCHSD2O94868 740 aa9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 CCDC27Q2M243 656 aa9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 SUPT16HQ9Y5B9 1047 aaKnown RBP9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 U2AF1L5P0DN76 240 aaPredicted RBP9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 NUBP1P53384 320 aa9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 U2AF1Q01081 240 aaKnown RBP eCLIP9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 RRS1Q15050 365 aaKnown RBP9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 TCP11L2Q8N4U5 519 aa9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 PRDM11Q9NQV5 511 aa9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 SALL2Q9Y467 1007 aaPredicted RBP9.53□□□□□ -0.88
SEC23IP-208ENST00000543134 KIF24Q5T7B8 1368 aa9.52□□□□□ -0.89
SEC23IP-208ENST00000543134 PHRF1Q9P1Y6 1649 aaKnown RBP9.52□□□□□ -0.89
SEC23IP-208ENST00000543134 DLG5Q8TDM6 1919 aa9.52□□□□□ -0.89
SEC23IP-208ENST00000543134 ALS2Q96Q42 1657 aa9.52□□□□□ -0.89
SEC23IP-208ENST00000543134 LTN1O94822 1766 aa9.52□□□□□ -0.89
SEC23IP-208ENST00000543134 NLRP6P59044 892 aa9.52□□□□□ -0.89
SEC23IP-208ENST00000543134 SLFN5Q08AF3 891 aa9.52□□□□□ -0.89
SEC23IP-208ENST00000543134 PNNQ9H307 717 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms