RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 ERCC6L2Q5T890 1561 aa11.82□□□□□ -0.52
TCF4-208ENST00000543082 KIF20BQ96Q89 1820 aa11.82□□□□□ -0.52
TCF4-208ENST00000543082 TAF3Q5VWG9 929 aa11.82□□□□□ -0.52
TCF4-208ENST00000543082 PDCL2Q8N4E4 241 aa11.82□□□□□ -0.52
TCF4-208ENST00000543082 API5Q9BZZ5 524 aaKnown RBP11.82□□□□□ -0.52
TCF4-208ENST00000543082 ATP2B3Q16720 1220 aa11.81□□□□□ -0.52
TCF4-208ENST00000543082 DIAPH3Q9NSV4 1193 aa11.81□□□□□ -0.52
TCF4-208ENST00000543082 FRMPD1Q5SYB0 1578 aa11.81□□□□□ -0.52
TCF4-208ENST00000543082 ZFYVE9O95405 1425 aa11.81□□□□□ -0.52
TCF4-208ENST00000543082 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
TCF4-208ENST00000543082 DIAPH1O60610 1272 aaKnown RBP11.81□□□□□ -0.52
TCF4-208ENST00000543082 VAMP4O75379 141 aa11.81□□□□□ -0.52
TCF4-208ENST00000543082 CHAF1AQ13111 956 aaPredicted RBP11.81□□□□□ -0.52
TCF4-208ENST00000543082 TSC1Q92574 1164 aa11.81□□□□□ -0.52
TCF4-208ENST00000543082 BCL2L12Q9HB09 334 aa11.81□□□□□ -0.52
TCF4-208ENST00000543082 RPGRIP1LQ68CZ1 1315 aa11.8□□□□□ -0.52
TCF4-208ENST00000543082 ERC2O15083 957 aa11.8□□□□□ -0.52
TCF4-208ENST00000543082 SDSP20132 328 aa11.8□□□□□ -0.52
TCF4-208ENST00000543082 A0A1W2PP64 1363 aa11.8□□□□□ -0.52
TCF4-208ENST00000543082 CUL4AQ13619 759 aa11.79□□□□□ -0.52
TCF4-208ENST00000543082 JARID2Q92833 1246 aaPredicted RBP11.79□□□□□ -0.52
TCF4-208ENST00000543082 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
TCF4-208ENST00000543082 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
TCF4-208ENST00000543082 ASXL2Q76L83 1435 aa11.79□□□□□ -0.52
TCF4-208ENST00000543082 TCHHQ07283 1943 aa11.79□□□□□ -0.52
TCF4-208ENST00000543082 FCHSD2O94868 740 aa11.79□□□□□ -0.52
TCF4-208ENST00000543082 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
TCF4-208ENST00000543082 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
TCF4-208ENST00000543082 FOXD4L4Q8WXT5 416 aaPredicted RBP11.79□□□□□ -0.52
TCF4-208ENST00000543082 INTS4Q96HW7 963 aaKnown RBP11.79□□□□□ -0.52
TCF4-208ENST00000543082 USP25Q9UHP3 1055 aa11.79□□□□□ -0.52
TCF4-208ENST00000543082 PNPLA6Q8IY17 1366 aa11.79□□□□□ -0.52
TCF4-208ENST00000543082 ADCY5O95622 1261 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 TPM3P06753 285 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 ANKRD7Q92527 254 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 KIDINS220Q9ULH0 1771 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 TUBGCP6Q96RT7 1819 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 ZBTB7CA1YPR0 619 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 GNAI1P63096 354 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 CCDC183Q5T5S1 534 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 TTC12Q9H892 705 aaPredicted RBP11.78□□□□□ -0.52
TCF4-208ENST00000543082 ATP10DQ9P241 1426 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 CAMSAP1Q5T5Y3 1602 aa11.78□□□□□ -0.52
TCF4-208ENST00000543082 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.52
TCF4-208ENST00000543082 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.52
TCF4-208ENST00000543082 FEZ1Q99689 392 aa11.77□□□□□ -0.52
TCF4-208ENST00000543082 IFT57Q9NWB7 429 aa11.77□□□□□ -0.52
TCF4-208ENST00000543082 CLTCQ00610 1675 aaKnown RBP11.77□□□□□ -0.53
TCF4-208ENST00000543082 NEK4P51957 841 aa11.77□□□□□ -0.53
TCF4-208ENST00000543082 GGNBP2Q9H3C7 697 aa11.77□□□□□ -0.53
TCF4-208ENST00000543082 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.53
TCF4-208ENST00000543082 ARHGEF40Q8TER5 1519 aa11.76□□□□□ -0.53
TCF4-208ENST00000543082 C16orf71Q8IYS4 520 aaPredicted RBP11.76□□□□□ -0.53
TCF4-208ENST00000543082 TMEM87AQ8NBN3 555 aa11.76□□□□□ -0.53
TCF4-208ENST00000543082 PIK3C2BO00750 1634 aa11.76□□□□□ -0.53
TCF4-208ENST00000543082 WDR33Q9C0J8 1336 aaKnown RBP11.76□□□□□ -0.53
TCF4-208ENST00000543082 MCCP23508 829 aa11.76□□□□□ -0.53
TCF4-208ENST00000543082 NFE2L2Q16236 605 aa11.76□□□□□ -0.53
TCF4-208ENST00000543082 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
TCF4-208ENST00000543082 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
TCF4-208ENST00000543082 CFAP65Q6ZU64 1925 aaKnown RBP11.75□□□□□ -0.53
TCF4-208ENST00000543082 CTIFO43310 598 aaKnown RBP11.75□□□□□ -0.53
TCF4-208ENST00000543082 C17orf53Q8N3J3 647 aaPredicted RBP11.75□□□□□ -0.53
TCF4-208ENST00000543082 TSPYL6Q8N831 410 aa11.75□□□□□ -0.53
TCF4-208ENST00000543082 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
TCF4-208ENST00000543082 PRKAR2BP31323 418 aa11.75□□□□□ -0.53
TCF4-208ENST00000543082 TWISTNBQ3B726 338 aaPredicted RBP11.75□□□□□ -0.53
TCF4-208ENST00000543082 KIAA1524Q8TCG1 905 aa11.75□□□□□ -0.53
TCF4-208ENST00000543082 OTUD7AQ8TE49 926 aaPredicted RBP11.75□□□□□ -0.53
TCF4-208ENST00000543082 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
TCF4-208ENST00000543082 RGS12O14924 1447 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 RTL1A6NKG5 1358 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 KDM4AO75164 1064 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 GADD45BO75293 160 aaPredicted RBP11.74□□□□□ -0.53
TCF4-208ENST00000543082 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
TCF4-208ENST00000543082 ANAPC15P60006 121 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 SYCP1Q15431 976 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 USP48Q86UV5 1035 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 MPNDQ8N594 471 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 OGFRQ9NZT2 677 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 NPATQ14207 1427 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 FAM177BA6PVY3 158 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 MX1P20591 662 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 GABPB1Q06547 395 aaPredicted RBP11.74□□□□□ -0.53
TCF4-208ENST00000543082 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
TCF4-208ENST00000543082 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
TCF4-208ENST00000543082 GOLGA6L6A8MZA4 724 aa11.73□□□□□ -0.53
TCF4-208ENST00000543082 U2AF2P26368 475 aaKnown RBP eCLIP11.73□□□□□ -0.53
TCF4-208ENST00000543082 MBIPQ9NS73 344 aa11.73□□□□□ -0.53
TCF4-208ENST00000543082 SSH2Q76I76 1423 aa11.73□□□□□ -0.53
TCF4-208ENST00000543082 HECW2Q9P2P5 1572 aa11.73□□□□□ -0.53
TCF4-208ENST00000543082 FYB1O15117 783 aa11.72□□□□□ -0.53
TCF4-208ENST00000543082 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
TCF4-208ENST00000543082 CEP85Q6P2H3 762 aa11.72□□□□□ -0.53
TCF4-208ENST00000543082 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
TCF4-208ENST00000543082 NEXMIFQ5QGS0 1516 aa11.72□□□□□ -0.53
TCF4-208ENST00000543082 RPAP1Q9BWH6 1393 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms