RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
C2CD3-219ENST00000542930 NSD2O96028 1365 aa13.57□□□□□ -0.24
C2CD3-219ENST00000542930 TOMM70O94826 608 aa13.56□□□□□ -0.24
C2CD3-219ENST00000542930 FLAD1Q8NFF5 587 aa13.56□□□□□ -0.24
C2CD3-219ENST00000542930 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
C2CD3-219ENST00000542930 COL13A1Q5TAT6 717 aaPredicted RBP13.55□□□□□ -0.24
C2CD3-219ENST00000542930 IGSF1Q8N6C5 1336 aa13.55□□□□□ -0.24
C2CD3-219ENST00000542930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.54□□□□□ -0.24
C2CD3-219ENST00000542930 USP47Q96K76 1375 aa13.54□□□□□ -0.24
C2CD3-219ENST00000542930 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
C2CD3-219ENST00000542930 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
C2CD3-219ENST00000542930 LTN1O94822 1766 aa13.53□□□□□ -0.24
C2CD3-219ENST00000542930 CAPN15O75808 1086 aa13.52□□□□□ -0.25
C2CD3-219ENST00000542930 NME9Q86XW9 330 aa13.52□□□□□ -0.25
C2CD3-219ENST00000542930 PRELPP51888 382 aa13.51□□□□□ -0.25
C2CD3-219ENST00000542930 JMYQ8N9B5 988 aa13.51□□□□□ -0.25
C2CD3-219ENST00000542930 ZCRB1Q8TBF4 217 aaKnown RBP13.51□□□□□ -0.25
C2CD3-219ENST00000542930 IP6K1Q92551 441 aa13.51□□□□□ -0.25
C2CD3-219ENST00000542930 WWC3Q9ULE0 1092 aa13.51□□□□□ -0.25
C2CD3-219ENST00000542930 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
C2CD3-219ENST00000542930 TNS4Q8IZW8 715 aa13.5□□□□□ -0.25
C2CD3-219ENST00000542930 KLRG1Q96E93 195 aa13.5□□□□□ -0.25
C2CD3-219ENST00000542930 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
C2CD3-219ENST00000542930 CICQ96RK0 1608 aaPredicted RBP13.49□□□□□ -0.25
C2CD3-219ENST00000542930 C5P01031 1676 aa13.48□□□□□ -0.25
C2CD3-219ENST00000542930 FAM208AQ9UK61 1670 aaKnown RBP13.48□□□□□ -0.25
C2CD3-219ENST00000542930 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
C2CD3-219ENST00000542930 LTV1Q96GA3 475 aaPredicted RBP13.48□□□□□ -0.25
C2CD3-219ENST00000542930 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
C2CD3-219ENST00000542930 AK7Q96M32 723 aa13.46□□□□□ -0.25
C2CD3-219ENST00000542930 NMRK2Q9NPI5 230 aa13.46□□□□□ -0.25
C2CD3-219ENST00000542930 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.25
C2CD3-219ENST00000542930 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
C2CD3-219ENST00000542930 MEGF6O75095 1541 aa13.45□□□□□ -0.26
C2CD3-219ENST00000542930 HTRA3P83110 453 aa13.45□□□□□ -0.26
C2CD3-219ENST00000542930 CGNL1Q0VF96 1302 aa13.44□□□□□ -0.26
C2CD3-219ENST00000542930 TAF1LQ8IZX4 1826 aa13.44□□□□□ -0.26
C2CD3-219ENST00000542930 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
C2CD3-219ENST00000542930 FSTL1Q12841 308 aa13.44□□□□□ -0.26
C2CD3-219ENST00000542930 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
C2CD3-219ENST00000542930 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
C2CD3-219ENST00000542930 C16orf71Q8IYS4 520 aaPredicted RBP13.44□□□□□ -0.26
C2CD3-219ENST00000542930 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
C2CD3-219ENST00000542930 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
C2CD3-219ENST00000542930 PHF14O94880 888 aa13.43□□□□□ -0.26
C2CD3-219ENST00000542930 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
C2CD3-219ENST00000542930 SSFA2P28290 1259 aa13.43□□□□□ -0.26
C2CD3-219ENST00000542930 HOXC9P31274 260 aa13.43□□□□□ -0.26
C2CD3-219ENST00000542930 TGFB2P61812 414 aa13.42□□□□□ -0.26
C2CD3-219ENST00000542930 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
C2CD3-219ENST00000542930 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
C2CD3-219ENST00000542930 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
C2CD3-219ENST00000542930 MAP3K19Q56UN5 1328 aa13.41□□□□□ -0.26
C2CD3-219ENST00000542930 AMPHP49418 695 aa13.41□□□□□ -0.26
C2CD3-219ENST00000542930 MPRIPQ6WCQ1 1025 aa13.41□□□□□ -0.26
C2CD3-219ENST00000542930 ARHGAP27Q6ZUM4 889 aa13.41□□□□□ -0.26
C2CD3-219ENST00000542930 SMIM5Q71RC9 77 aa13.41□□□□□ -0.26
C2CD3-219ENST00000542930 SLC12A5Q9H2X9 1139 aa13.41□□□□□ -0.26
C2CD3-219ENST00000542930 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
C2CD3-219ENST00000542930 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
C2CD3-219ENST00000542930 PXDNLA1KZ92 1463 aa13.41□□□□□ -0.26
C2CD3-219ENST00000542930 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
C2CD3-219ENST00000542930 L3MBTL2Q969R5 705 aa13.4□□□□□ -0.26
C2CD3-219ENST00000542930 TERF2IPQ9NYB0 399 aa13.4□□□□□ -0.26
C2CD3-219ENST00000542930 UBR3Q6ZT12 1888 aa13.4□□□□□ -0.26
C2CD3-219ENST00000542930 NBPF6Q5VWK0 638 aa13.39□□□□□ -0.27
C2CD3-219ENST00000542930 NBPF4Q96M43 638 aa13.39□□□□□ -0.27
C2CD3-219ENST00000542930 PCDH11XQ9BZA7 1347 aa13.39□□□□□ -0.27
C2CD3-219ENST00000542930 PCDH11YQ9BZA8 1340 aa13.39□□□□□ -0.27
C2CD3-219ENST00000542930 A0A1W2PP64 1363 aa13.38□□□□□ -0.27
C2CD3-219ENST00000542930 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
C2CD3-219ENST00000542930 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
C2CD3-219ENST00000542930 MMP10P09238 476 aa13.38□□□□□ -0.27
C2CD3-219ENST00000542930 TATP17735 454 aaPredicted RBP13.38□□□□□ -0.27
C2CD3-219ENST00000542930 COG3Q96JB2 828 aa13.38□□□□□ -0.27
C2CD3-219ENST00000542930 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
C2CD3-219ENST00000542930 C9orf131Q5VYM1 1079 aa13.37□□□□□ -0.27
C2CD3-219ENST00000542930 KDM2BQ8NHM5 1336 aa13.37□□□□□ -0.27
C2CD3-219ENST00000542930 KIF13BQ9NQT8 1826 aa13.36□□□□□ -0.27
C2CD3-219ENST00000542930 KIAA1551Q9HCM1 1747 aa13.36□□□□□ -0.27
C2CD3-219ENST00000542930 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
C2CD3-219ENST00000542930 FCHSD2O94868 740 aa13.36□□□□□ -0.27
C2CD3-219ENST00000542930 FBLN1P23142 703 aa13.36□□□□□ -0.27
C2CD3-219ENST00000542930 USHBP1Q8N6Y0 703 aa13.36□□□□□ -0.27
C2CD3-219ENST00000542930 LINC00116Q8NCU8 138 aa13.36□□□□□ -0.27
C2CD3-219ENST00000542930 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
C2CD3-219ENST00000542930 LOC102724428A0A0B4J2F2 783 aa13.35□□□□□ -0.27
C2CD3-219ENST00000542930 CYP27B1O15528 508 aa13.35□□□□□ -0.27
C2CD3-219ENST00000542930 HSPA1AP0DMV8 641 aaKnown RBP13.35□□□□□ -0.27
C2CD3-219ENST00000542930 HSPA1BP0DMV9 641 aaKnown RBP13.35□□□□□ -0.27
C2CD3-219ENST00000542930 SIK1P57059 783 aa13.35□□□□□ -0.27
C2CD3-219ENST00000542930 PIGBQ92521 554 aa13.35□□□□□ -0.27
C2CD3-219ENST00000542930 N4BP2Q86UW6 1770 aaPredicted RBP13.35□□□□□ -0.27
C2CD3-219ENST00000542930 GNPATO15228 680 aa13.34□□□□□ -0.27
C2CD3-219ENST00000542930 SLC34A2O95436 690 aa13.34□□□□□ -0.27
C2CD3-219ENST00000542930 DPEP1P16444 411 aa13.34□□□□□ -0.27
C2CD3-219ENST00000542930 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
C2CD3-219ENST00000542930 SMC1BQ8NDV3 1235 aa13.34□□□□□ -0.27
C2CD3-219ENST00000542930 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
C2CD3-219ENST00000542930 RRAGCQ9HB90 399 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms