RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 RGPD1P0DJD0 1748 aa19.11■□□□□ 0.65
DDX11-221ENST00000542661 RALBP1Q15311 655 aa19.1■□□□□ 0.65
DDX11-221ENST00000542661 DDX54Q8TDD1 881 aaKnown RBP19.09■□□□□ 0.65
DDX11-221ENST00000542661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.09■□□□□ 0.65
DDX11-221ENST00000542661 TRIM37O94972 964 aa19.08■□□□□ 0.64
DDX11-221ENST00000542661 SPG7Q9UQ90 795 aa19.08■□□□□ 0.64
DDX11-221ENST00000542661 PCDH11XQ9BZA7 1347 aa19.07■□□□□ 0.64
DDX11-221ENST00000542661 PCDH11YQ9BZA8 1340 aa19.07■□□□□ 0.64
DDX11-221ENST00000542661 BAG6P46379 1132 aa19.06■□□□□ 0.64
DDX11-221ENST00000542661 KDRP35968 1356 aa19.06■□□□□ 0.64
DDX11-221ENST00000542661 SBF2Q86WG5 1849 aa19.05■□□□□ 0.64
DDX11-221ENST00000542661 COL3A1P02461 1466 aaPredicted RBP19.05■□□□□ 0.64
DDX11-221ENST00000542661 SULT6B1Q6IMI4 303 aa19.05■□□□□ 0.64
DDX11-221ENST00000542661 BCL11BQ9C0K0 894 aaPredicted RBP19.05■□□□□ 0.64
DDX11-221ENST00000542661 PKD1L3Q7Z443 1732 aa19.04■□□□□ 0.64
DDX11-221ENST00000542661 SHANK3Q9BYB0 1731 aa19.04■□□□□ 0.64
DDX11-221ENST00000542661 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
DDX11-221ENST00000542661 TNS1Q9HBL0 1735 aaKnown RBP19.03■□□□□ 0.64
DDX11-221ENST00000542661 AMOTQ4VCS5 1084 aa19.03■□□□□ 0.64
DDX11-221ENST00000542661 APBA3O96018 575 aa19.02■□□□□ 0.64
DDX11-221ENST00000542661 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
DDX11-221ENST00000542661 AEBP1Q8IUX7 1158 aa19.02■□□□□ 0.64
DDX11-221ENST00000542661 KAT6BQ8WYB5 2073 aa19.01■□□□□ 0.63
DDX11-221ENST00000542661 U2SURPO15042 1029 aaKnown RBP19.01■□□□□ 0.63
DDX11-221ENST00000542661 CYP27B1O15528 508 aa19■□□□□ 0.63
DDX11-221ENST00000542661 DEFB132Q7Z7B7 95 aa19■□□□□ 0.63
DDX11-221ENST00000542661 MYBBP1AQ9BQG0 1328 aaKnown RBP19■□□□□ 0.63
DDX11-221ENST00000542661 NHSQ6T4R5 1651 aa18.99■□□□□ 0.63
DDX11-221ENST00000542661 IFNL2Q8IZJ0 200 aa18.99■□□□□ 0.63
DDX11-221ENST00000542661 ACSBG1Q96GR2 724 aa18.99■□□□□ 0.63
DDX11-221ENST00000542661 HMOX1P09601 288 aa18.98■□□□□ 0.63
DDX11-221ENST00000542661 NKX1-1Q15270 411 aaPredicted RBP18.98■□□□□ 0.63
DDX11-221ENST00000542661 PRKRIP1Q9H875 184 aaPredicted RBP18.98■□□□□ 0.63
DDX11-221ENST00000542661 PLSCR1O15162 318 aa18.97■□□□□ 0.63
DDX11-221ENST00000542661 KCNQ2O43526 872 aa18.97■□□□□ 0.63
DDX11-221ENST00000542661 EN1Q05925 392 aaPredicted RBP18.97■□□□□ 0.63
DDX11-221ENST00000542661 HSP90AB1P08238 724 aaKnown RBP18.96■□□□□ 0.63
DDX11-221ENST00000542661 PHKG2P15735 406 aa18.96■□□□□ 0.63
DDX11-221ENST00000542661 CAMKK2Q96RR4 588 aa18.96■□□□□ 0.63
DDX11-221ENST00000542661 U2AF1L5P0DN76 240 aaPredicted RBP18.95■□□□□ 0.62
DDX11-221ENST00000542661 PRIM1P49642 420 aaKnown RBP18.95■□□□□ 0.62
DDX11-221ENST00000542661 U2AF1Q01081 240 aaKnown RBP eCLIP18.95■□□□□ 0.62
DDX11-221ENST00000542661 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
DDX11-221ENST00000542661 ZNF530Q6P9A1 599 aaPredicted RBP18.95■□□□□ 0.62
DDX11-221ENST00000542661 PTF1AQ7RTS3 328 aa18.95■□□□□ 0.62
DDX11-221ENST00000542661 SYTL4Q96C24 671 aaPredicted RBP18.95■□□□□ 0.62
DDX11-221ENST00000542661 DOT1LQ8TEK3 1739 aa18.94■□□□□ 0.62
DDX11-221ENST00000542661 RGPD3A6NKT7 1758 aaPredicted RBP18.94■□□□□ 0.62
DDX11-221ENST00000542661 RGPD4Q7Z3J3 1758 aa18.94■□□□□ 0.62
DDX11-221ENST00000542661 FCHSD2O94868 740 aa18.93■□□□□ 0.62
DDX11-221ENST00000542661 EZH2Q15910 746 aaKnown RBP18.92■□□□□ 0.62
DDX11-221ENST00000542661 DCAF5Q96JK2 942 aa18.92■□□□□ 0.62
DDX11-221ENST00000542661 BTAF1O14981 1849 aa18.92■□□□□ 0.62
DDX11-221ENST00000542661 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
DDX11-221ENST00000542661 AKAP4Q5JQC9 854 aa18.9■□□□□ 0.62
DDX11-221ENST00000542661 PNNQ9H307 717 aaKnown RBP18.9■□□□□ 0.62
DDX11-221ENST00000542661 ERVV-2B6SEH9 535 aa18.89■□□□□ 0.61
DDX11-221ENST00000542661 ANP32CO43423 234 aa18.89■□□□□ 0.61
DDX11-221ENST00000542661 PRKAR2BP31323 418 aa18.89■□□□□ 0.61
DDX11-221ENST00000542661 GAS2L2Q8NHY3 880 aa18.89■□□□□ 0.61
DDX11-221ENST00000542661 MTHFSDQ2M296 383 aaKnown RBP18.88■□□□□ 0.61
DDX11-221ENST00000542661 MPRIPQ6WCQ1 1025 aa18.88■□□□□ 0.61
DDX11-221ENST00000542661 RREB1Q92766 1687 aa18.88■□□□□ 0.61
DDX11-221ENST00000542661 TOGARAM1Q9Y4F4 1720 aa18.88■□□□□ 0.61
DDX11-221ENST00000542661 NEFMP07197 916 aa18.87■□□□□ 0.61
DDX11-221ENST00000542661 ITGB4P16144 1822 aa18.87■□□□□ 0.61
DDX11-221ENST00000542661 TMOD3Q9NYL9 352 aa18.87■□□□□ 0.61
DDX11-221ENST00000542661 TXNRD1Q16881 649 aa18.86■□□□□ 0.61
DDX11-221ENST00000542661 NBPF14Q5TI25 921 aa18.85■□□□□ 0.61
DDX11-221ENST00000542661 PIGBQ92521 554 aa18.85■□□□□ 0.61
DDX11-221ENST00000542661 SMARCC1Q92922 1105 aaPredicted RBP18.85■□□□□ 0.61
DDX11-221ENST00000542661 PHACTR3Q96KR7 559 aa18.85■□□□□ 0.61
DDX11-221ENST00000542661 KDM6AO15550 1401 aaPredicted RBP18.84■□□□□ 0.61
DDX11-221ENST00000542661 HMGB2P26583 209 aaKnown RBP18.84■□□□□ 0.61
DDX11-221ENST00000542661 SLC27A3Q5K4L6 730 aa18.84■□□□□ 0.61
DDX11-221ENST00000542661 PROM2Q8N271 834 aa18.84■□□□□ 0.61
DDX11-221ENST00000542661 NUP188Q5SRE5 1749 aa18.83■□□□□ 0.61
DDX11-221ENST00000542661 GNAT3A8MTJ3 354 aa18.83■□□□□ 0.6
DDX11-221ENST00000542661 CABP4P57796 275 aa18.83■□□□□ 0.6
DDX11-221ENST00000542661 WDR43Q15061 677 aaKnown RBP eCLIP18.83■□□□□ 0.6
DDX11-221ENST00000542661 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
DDX11-221ENST00000542661 SCN11AQ9UI33 1791 aa18.82■□□□□ 0.6
DDX11-221ENST00000542661 PALLDQ8WX93 1383 aa18.81■□□□□ 0.6
DDX11-221ENST00000542661 LY75O60449 1722 aa18.8■□□□□ 0.6
DDX11-221ENST00000542661 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
DDX11-221ENST00000542661 RNMTO43148 476 aaKnown RBP18.8■□□□□ 0.6
DDX11-221ENST00000542661 PLEKHF1Q96S99 279 aa18.8■□□□□ 0.6
DDX11-221ENST00000542661 NFATC2IPQ8NCF5 419 aa18.79■□□□□ 0.6
DDX11-221ENST00000542661 RTF1Q92541 710 aaKnown RBP18.79■□□□□ 0.6
DDX11-221ENST00000542661 SLC52A2Q9HAB3 445 aa18.79■□□□□ 0.6
DDX11-221ENST00000542661 LGR6Q9HBX8 967 aa18.79■□□□□ 0.6
DDX11-221ENST00000542661 ADAMTS7Q9UKP4 1686 aa18.79■□□□□ 0.6
DDX11-221ENST00000542661 HTATSF1O43719 755 aaKnown RBP18.78■□□□□ 0.6
DDX11-221ENST00000542661 CCNL1Q9UK58 526 aaPredicted RBP18.78■□□□□ 0.6
DDX11-221ENST00000542661 ASAP1Q9ULH1 1129 aa18.78■□□□□ 0.6
DDX11-221ENST00000542661 ATG3Q9NT62 314 aa18.77■□□□□ 0.6
DDX11-221ENST00000542661 LRRC4BQ9NT99 713 aa18.77■□□□□ 0.6
DDX11-221ENST00000542661 STK32BQ9NY57 414 aa18.77■□□□□ 0.6
DDX11-221ENST00000542661 MRC1P22897 1456 aa18.77■□□□□ 0.59
DDX11-221ENST00000542661 VIRMAQ69YN4 1812 aaKnown RBP18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms