RNA–Protein interactions for RNA: ENST00000542643.6

RAP1GAP-212, Transcript of RAP1 GTPase activating protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAP1GAP, Length 3,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GAP-212ENST00000542643 KLHL40Q2TBA0 621 aa12.68□□□□□ -0.38
RAP1GAP-212ENST00000542643 SASS6Q6UVJ0 657 aa12.68□□□□□ -0.38
RAP1GAP-212ENST00000542643 CIZ1Q9ULV3 898 aaPredicted RBP12.68□□□□□ -0.38
RAP1GAP-212ENST00000542643 PHRF1Q9P1Y6 1649 aaKnown RBP12.68□□□□□ -0.38
RAP1GAP-212ENST00000542643 ABCA3Q99758 1704 aa12.68□□□□□ -0.38
RAP1GAP-212ENST00000542643 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
RAP1GAP-212ENST00000542643 FOXD4L6Q3SYB3 417 aaPredicted RBP12.68□□□□□ -0.38
RAP1GAP-212ENST00000542643 FOXD4L3Q6VB84 417 aaPredicted RBP12.68□□□□□ -0.38
RAP1GAP-212ENST00000542643 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
RAP1GAP-212ENST00000542643 ZKSCAN5Q9Y2L8 839 aa12.67□□□□□ -0.38
RAP1GAP-212ENST00000542643 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
RAP1GAP-212ENST00000542643 SYCE3A1L190 88 aa12.67□□□□□ -0.38
RAP1GAP-212ENST00000542643 DDIT3P35638 169 aa12.67□□□□□ -0.38
RAP1GAP-212ENST00000542643 CSPP1Q1MSJ5 1256 aa12.67□□□□□ -0.38
RAP1GAP-212ENST00000542643 ZNF830Q96NB3 372 aaPredicted RBP12.67□□□□□ -0.38
RAP1GAP-212ENST00000542643 CCDC94Q9BW85 323 aaPredicted RBP12.66□□□□□ -0.38
RAP1GAP-212ENST00000542643 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
RAP1GAP-212ENST00000542643 COL22A1Q8NFW1 1626 aaPredicted RBP12.66□□□□□ -0.38
RAP1GAP-212ENST00000542643 PKP1Q13835 747 aa12.66□□□□□ -0.38
RAP1GAP-212ENST00000542643 TMEM132EQ6IEE7 984 aa12.66□□□□□ -0.38
RAP1GAP-212ENST00000542643 MTERF4Q7Z6M4 381 aaKnown RBP12.66□□□□□ -0.38
RAP1GAP-212ENST00000542643 CPSF1Q10570 1443 aaKnown RBP12.66□□□□□ -0.38
RAP1GAP-212ENST00000542643 ANKRD45Q5TZF3 282 aa12.66□□□□□ -0.38
RAP1GAP-212ENST00000542643 DMTNQ08495 405 aa12.65□□□□□ -0.38
RAP1GAP-212ENST00000542643 C17orf53Q8N3J3 647 aaPredicted RBP12.65□□□□□ -0.38
RAP1GAP-212ENST00000542643 AHDC1Q5TGY3 1603 aaPredicted RBP12.65□□□□□ -0.38
RAP1GAP-212ENST00000542643 PLCB2Q00722 1185 aa12.65□□□□□ -0.38
RAP1GAP-212ENST00000542643 SNX21Q969T3 373 aa12.65□□□□□ -0.38
RAP1GAP-212ENST00000542643 ZNF500O60304 480 aaPredicted RBP12.65□□□□□ -0.39
RAP1GAP-212ENST00000542643 TERF1P54274 439 aa12.65□□□□□ -0.39
RAP1GAP-212ENST00000542643 PPP4R3BQ5MIZ7 849 aa12.65□□□□□ -0.39
RAP1GAP-212ENST00000542643 AMOTL2Q9Y2J4 779 aa12.65□□□□□ -0.39
RAP1GAP-212ENST00000542643 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
RAP1GAP-212ENST00000542643 SAFB2Q14151 953 aaKnown RBP eCLIP12.64□□□□□ -0.39
RAP1GAP-212ENST00000542643 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
RAP1GAP-212ENST00000542643 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
RAP1GAP-212ENST00000542643 VGLL3A8MV65 326 aa12.64□□□□□ -0.39
RAP1GAP-212ENST00000542643 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
RAP1GAP-212ENST00000542643 RBM25P49756 843 aaKnown RBP12.63□□□□□ -0.39
RAP1GAP-212ENST00000542643 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
RAP1GAP-212ENST00000542643 MORC1Q86VD1 984 aa12.63□□□□□ -0.39
RAP1GAP-212ENST00000542643 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
RAP1GAP-212ENST00000542643 STK26Q9P289 416 aa12.63□□□□□ -0.39
RAP1GAP-212ENST00000542643 MED1Q15648 1581 aaPredicted RBP12.63□□□□□ -0.39
RAP1GAP-212ENST00000542643 ZSCAN20P17040 1043 aaPredicted RBP12.63□□□□□ -0.39
RAP1GAP-212ENST00000542643 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
RAP1GAP-212ENST00000542643 AK9Q5TCS8 1911 aa12.63□□□□□ -0.39
RAP1GAP-212ENST00000542643 TRIM27P14373 513 aa12.62□□□□□ -0.39
RAP1GAP-212ENST00000542643 KIAA2012Q0VF49 1180 aa12.62□□□□□ -0.39
RAP1GAP-212ENST00000542643 RUNDC1Q96C34 613 aa12.62□□□□□ -0.39
RAP1GAP-212ENST00000542643 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
RAP1GAP-212ENST00000542643 ROBO1Q9Y6N7 1651 aa12.62□□□□□ -0.39
RAP1GAP-212ENST00000542643 TMEM57Q8N5G2 664 aa12.62□□□□□ -0.39
RAP1GAP-212ENST00000542643 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
RAP1GAP-212ENST00000542643 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.39
RAP1GAP-212ENST00000542643 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
RAP1GAP-212ENST00000542643 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
RAP1GAP-212ENST00000542643 KIF2CQ99661 725 aa12.61□□□□□ -0.39
RAP1GAP-212ENST00000542643 ZNF445P59923 1031 aa12.6□□□□□ -0.39
RAP1GAP-212ENST00000542643 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
RAP1GAP-212ENST00000542643 C14orf37Q86TY3 774 aa12.6□□□□□ -0.39
RAP1GAP-212ENST00000542643 NOL8Q76FK4 1167 aaKnown RBP12.6□□□□□ -0.39
RAP1GAP-212ENST00000542643 LMBRD1Q9NUN5 540 aa12.6□□□□□ -0.39
RAP1GAP-212ENST00000542643 ATP2B3Q16720 1220 aa12.6□□□□□ -0.39
RAP1GAP-212ENST00000542643 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
RAP1GAP-212ENST00000542643 DDX19BQ9UMR2 479 aa12.6□□□□□ -0.39
RAP1GAP-212ENST00000542643 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAP1GAP-212ENST00000542643 KIF16BQ96L93 1317 aa12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 NSFL1CQ9UNZ2 370 aaKnown RBP12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 PXDNQ92626 1479 aa12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 HS1BP3Q53T59 392 aa12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 ZGPATQ8N5A5 531 aaKnown RBP12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 PRAM1Q96QH2 718 aa12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 CGNQ9P2M7 1197 aaKnown RBP12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 COL16A1Q07092 1604 aaPredicted RBP12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 APBB1O00213 710 aa12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 ZBTB22O15209 634 aa12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 ZNF771Q7L3S4 317 aaPredicted RBP12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 RBM33Q96EV2 1170 aaKnown RBP12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 TMEM63CQ9P1W3 806 aa12.59□□□□□ -0.39
RAP1GAP-212ENST00000542643 SHPRHQ149N8 1683 aa12.58□□□□□ -0.39
RAP1GAP-212ENST00000542643 ZNF335Q9H4Z2 1342 aaPredicted RBP12.58□□□□□ -0.39
RAP1GAP-212ENST00000542643 U2SURPO15042 1029 aaKnown RBP12.58□□□□□ -0.4
RAP1GAP-212ENST00000542643 CARD14Q9BXL6 1004 aa12.58□□□□□ -0.4
RAP1GAP-212ENST00000542643 C1orf167Q5SNV9 1468 aa12.58□□□□□ -0.4
RAP1GAP-212ENST00000542643 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
RAP1GAP-212ENST00000542643 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
RAP1GAP-212ENST00000542643 TMEM94Q12767 1356 aa12.58□□□□□ -0.4
RAP1GAP-212ENST00000542643 PRR36Q9H6K5 1346 aa12.57□□□□□ -0.4
RAP1GAP-212ENST00000542643 PDLIM2Q96JY6 352 aa12.57□□□□□ -0.4
RAP1GAP-212ENST00000542643 TTC12Q9H892 705 aaPredicted RBP12.57□□□□□ -0.4
RAP1GAP-212ENST00000542643 NPC1L1Q9UHC9 1359 aa12.57□□□□□ -0.4
RAP1GAP-212ENST00000542643 HDAC1Q13547 482 aaPredicted RBP12.57□□□□□ -0.4
RAP1GAP-212ENST00000542643 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
RAP1GAP-212ENST00000542643 WAPLQ7Z5K2 1190 aa12.57□□□□□ -0.4
RAP1GAP-212ENST00000542643 ZNF710Q8N1W2 664 aa12.57□□□□□ -0.4
RAP1GAP-212ENST00000542643 TRAK1Q9UPV9 953 aa12.57□□□□□ -0.4
RAP1GAP-212ENST00000542643 NUCB2P80303 420 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms