RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 NPC1L1Q9UHC9 1359 aa21.11■□□□□ 0.97
ECHDC2-223ENST00000542552 ZCRB1Q8TBF4 217 aaKnown RBP21.11■□□□□ 0.97
ECHDC2-223ENST00000542552 PLSCR1O15162 318 aa21.1■□□□□ 0.97
ECHDC2-223ENST00000542552 RAPGEF4Q8WZA2 1011 aa21.1■□□□□ 0.97
ECHDC2-223ENST00000542552 EYA1Q99502 592 aa21.1■□□□□ 0.97
ECHDC2-223ENST00000542552 EIF4A2Q14240 407 aaKnown RBP21.09■□□□□ 0.97
ECHDC2-223ENST00000542552 DDX54Q8TDD1 881 aaKnown RBP21.09■□□□□ 0.97
ECHDC2-223ENST00000542552 KCNQ2O43526 872 aa21.08■□□□□ 0.97
ECHDC2-223ENST00000542552 NUP188Q5SRE5 1749 aa21.07■□□□□ 0.96
ECHDC2-223ENST00000542552 TATP17735 454 aaPredicted RBP21.07■□□□□ 0.96
ECHDC2-223ENST00000542552 PKD1L3Q7Z443 1732 aa21.06■□□□□ 0.96
ECHDC2-223ENST00000542552 CC2D1BQ5T0F9 858 aaKnown RBP21.05■□□□□ 0.96
ECHDC2-223ENST00000542552 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
ECHDC2-223ENST00000542552 IGSF1Q8N6C5 1336 aa21.04■□□□□ 0.96
ECHDC2-223ENST00000542552 BTAF1O14981 1849 aa21.03■□□□□ 0.96
ECHDC2-223ENST00000542552 DOT1LQ8TEK3 1739 aa21.02■□□□□ 0.96
ECHDC2-223ENST00000542552 KAT6BQ8WYB5 2073 aa21.02■□□□□ 0.96
ECHDC2-223ENST00000542552 PROM2Q8N271 834 aa21.02■□□□□ 0.96
ECHDC2-223ENST00000542552 PLEKHG2Q9H7P9 1386 aa21.01■□□□□ 0.95
ECHDC2-223ENST00000542552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.01■□□□□ 0.95
ECHDC2-223ENST00000542552 PCDH11XQ9BZA7 1347 aa21.01■□□□□ 0.95
ECHDC2-223ENST00000542552 PCDH11YQ9BZA8 1340 aa21.01■□□□□ 0.95
ECHDC2-223ENST00000542552 CYP27B1O15528 508 aa21■□□□□ 0.95
ECHDC2-223ENST00000542552 MTHFSP49914 203 aa21■□□□□ 0.95
ECHDC2-223ENST00000542552 IL13P35225 146 aa20.99■□□□□ 0.95
ECHDC2-223ENST00000542552 PSDA5PKW4 1024 aaPredicted RBP20.98■□□□□ 0.95
ECHDC2-223ENST00000542552 PRIM1P49642 420 aaKnown RBP20.98■□□□□ 0.95
ECHDC2-223ENST00000542552 R3HDM1Q15032 1099 aaKnown RBP20.97■□□□□ 0.95
ECHDC2-223ENST00000542552 SPG7Q9UQ90 795 aa20.97■□□□□ 0.95
ECHDC2-223ENST00000542552 NKX1-1Q15270 411 aaPredicted RBP20.96■□□□□ 0.95
ECHDC2-223ENST00000542552 TXNRD1Q16881 649 aa20.96■□□□□ 0.95
ECHDC2-223ENST00000542552 KDRP35968 1356 aa20.96■□□□□ 0.95
ECHDC2-223ENST00000542552 NBPF14Q5TI25 921 aa20.95■□□□□ 0.94
ECHDC2-223ENST00000542552 TOGARAM1Q9Y4F4 1720 aa20.95■□□□□ 0.94
ECHDC2-223ENST00000542552 AEBP1Q8IUX7 1158 aa20.93■□□□□ 0.94
ECHDC2-223ENST00000542552 COL3A1P02461 1466 aaPredicted RBP20.93■□□□□ 0.94
ECHDC2-223ENST00000542552 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
ECHDC2-223ENST00000542552 SYTL4Q96C24 671 aaPredicted RBP20.92■□□□□ 0.94
ECHDC2-223ENST00000542552 ITGB4P16144 1822 aa20.92■□□□□ 0.94
ECHDC2-223ENST00000542552 LY75O60449 1722 aa20.91■□□□□ 0.94
ECHDC2-223ENST00000542552 PHKG2P15735 406 aa20.91■□□□□ 0.94
ECHDC2-223ENST00000542552 SULT6B1Q6IMI4 303 aa20.91■□□□□ 0.94
ECHDC2-223ENST00000542552 ANO8Q9HCE9 1232 aaPredicted RBP20.91■□□□□ 0.94
ECHDC2-223ENST00000542552 PAPPAQ13219 1627 aa20.9■□□□□ 0.94
ECHDC2-223ENST00000542552 IFNL2Q8IZJ0 200 aa20.9■□□□□ 0.94
ECHDC2-223ENST00000542552 LRP5O75197 1615 aa20.89■□□□□ 0.94
ECHDC2-223ENST00000542552 DIAPH1O60610 1272 aaKnown RBP20.89■□□□□ 0.93
ECHDC2-223ENST00000542552 ZEB1P37275 1124 aaPredicted RBP20.88■□□□□ 0.93
ECHDC2-223ENST00000542552 AMOTQ4VCS5 1084 aa20.88■□□□□ 0.93
ECHDC2-223ENST00000542552 PLEKHO1Q53GL0 409 aaPredicted RBP20.88■□□□□ 0.93
ECHDC2-223ENST00000542552 LRRC4BQ9NT99 713 aa20.88■□□□□ 0.93
ECHDC2-223ENST00000542552 SLC27A3Q5K4L6 730 aa20.87■□□□□ 0.93
ECHDC2-223ENST00000542552 PPP2R1AP30153 589 aa20.86■□□□□ 0.93
ECHDC2-223ENST00000542552 MPRIPQ6WCQ1 1025 aa20.85■□□□□ 0.93
ECHDC2-223ENST00000542552 SLC15A2Q16348 729 aa20.84■□□□□ 0.93
ECHDC2-223ENST00000542552 PIGBQ92521 554 aa20.84■□□□□ 0.93
ECHDC2-223ENST00000542552 CASZ1Q86V15 1759 aa20.84■□□□□ 0.93
ECHDC2-223ENST00000542552 ZNF530Q6P9A1 599 aaPredicted RBP20.83■□□□□ 0.93
ECHDC2-223ENST00000542552 STK32BQ9NY57 414 aa20.83■□□□□ 0.93
ECHDC2-223ENST00000542552 HSP90AB1P08238 724 aaKnown RBP20.82■□□□□ 0.92
ECHDC2-223ENST00000542552 HMOX1P09601 288 aa20.82■□□□□ 0.92
ECHDC2-223ENST00000542552 DCAF5Q96JK2 942 aa20.82■□□□□ 0.92
ECHDC2-223ENST00000542552 KDM6AO15550 1401 aaPredicted RBP20.81■□□□□ 0.92
ECHDC2-223ENST00000542552 AKT1S1Q96B36 256 aa20.81■□□□□ 0.92
ECHDC2-223ENST00000542552 CFAP53Q96M91 514 aa20.81■□□□□ 0.92
ECHDC2-223ENST00000542552 ERVV-2B6SEH9 535 aa20.8■□□□□ 0.92
ECHDC2-223ENST00000542552 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
ECHDC2-223ENST00000542552 PALLDQ8WX93 1383 aa20.8■□□□□ 0.92
ECHDC2-223ENST00000542552 KCNQ4P56696 695 aa20.79■□□□□ 0.92
ECHDC2-223ENST00000542552 ZNF827Q17R98 1081 aa20.79■□□□□ 0.92
ECHDC2-223ENST00000542552 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
ECHDC2-223ENST00000542552 PDGFDQ9GZP0 370 aaPredicted RBP20.79■□□□□ 0.92
ECHDC2-223ENST00000542552 TMOD3Q9NYL9 352 aa20.79■□□□□ 0.92
ECHDC2-223ENST00000542552 CCNL1Q9UK58 526 aaPredicted RBP20.79■□□□□ 0.92
ECHDC2-223ENST00000542552 QSER1Q2KHR3 1735 aa20.78■□□□□ 0.92
ECHDC2-223ENST00000542552 C1orf141Q5JVX7 400 aa20.78■□□□□ 0.92
ECHDC2-223ENST00000542552 SCN11AQ9UI33 1791 aa20.77■□□□□ 0.92
ECHDC2-223ENST00000542552 TAF1LQ8IZX4 1826 aa20.77■□□□□ 0.92
ECHDC2-223ENST00000542552 U2SURPO15042 1029 aaKnown RBP20.77■□□□□ 0.92
ECHDC2-223ENST00000542552 AKAP4Q5JQC9 854 aa20.76■□□□□ 0.91
ECHDC2-223ENST00000542552 ASAP1Q9ULH1 1129 aa20.76■□□□□ 0.91
ECHDC2-223ENST00000542552 C5P01031 1676 aa20.76■□□□□ 0.91
ECHDC2-223ENST00000542552 ADAMTS7Q9UKP4 1686 aa20.75■□□□□ 0.91
ECHDC2-223ENST00000542552 MTHFSDQ2M296 383 aaKnown RBP20.75■□□□□ 0.91
ECHDC2-223ENST00000542552 ATG3Q9NT62 314 aa20.75■□□□□ 0.91
ECHDC2-223ENST00000542552 TUBGCP6Q96RT7 1819 aa20.75■□□□□ 0.91
ECHDC2-223ENST00000542552 SPON1Q9HCB6 807 aa20.73■□□□□ 0.91
ECHDC2-223ENST00000542552 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
ECHDC2-223ENST00000542552 VIRMAQ69YN4 1812 aaKnown RBP20.73■□□□□ 0.91
ECHDC2-223ENST00000542552 HMGB2P26583 209 aaKnown RBP20.72■□□□□ 0.91
ECHDC2-223ENST00000542552 RALBP1Q15311 655 aa20.72■□□□□ 0.91
ECHDC2-223ENST00000542552 RSPH6AQ9H0K4 717 aa20.72■□□□□ 0.91
ECHDC2-223ENST00000542552 ZNF831Q5JPB2 1677 aa20.71■□□□□ 0.91
ECHDC2-223ENST00000542552 LOC102724428A0A0B4J2F2 783 aa20.71■□□□□ 0.91
ECHDC2-223ENST00000542552 SIK1P57059 783 aa20.71■□□□□ 0.91
ECHDC2-223ENST00000542552 CABP4P57796 275 aa20.71■□□□□ 0.91
ECHDC2-223ENST00000542552 MRC1P22897 1456 aa20.7■□□□□ 0.9
ECHDC2-223ENST00000542552 NFATC2IPQ8NCF5 419 aa20.7■□□□□ 0.9
ECHDC2-223ENST00000542552 LGR6Q9HBX8 967 aa20.7■□□□□ 0.9
ECHDC2-223ENST00000542552 PNPLA7Q6ZV29 1317 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms