RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 APBA3O96018 575 aa15.79■□□□□ 0.12
C2CD3-217ENST00000542452 MORC1Q86VD1 984 aa15.79■□□□□ 0.12
C2CD3-217ENST00000542452 EIF4A2Q14240 407 aaKnown RBP15.78■□□□□ 0.12
C2CD3-217ENST00000542452 NPC1L1Q9UHC9 1359 aa15.77■□□□□ 0.12
C2CD3-217ENST00000542452 EYA1Q99502 592 aa15.77■□□□□ 0.12
C2CD3-217ENST00000542452 PARD3Q8TEW0 1356 aa15.76■□□□□ 0.11
C2CD3-217ENST00000542452 KCNQ2O43526 872 aa15.76■□□□□ 0.11
C2CD3-217ENST00000542452 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
C2CD3-217ENST00000542452 ACSBG1Q96GR2 724 aa15.76■□□□□ 0.11
C2CD3-217ENST00000542452 COL3A1P02461 1466 aaPredicted RBP15.76■□□□□ 0.11
C2CD3-217ENST00000542452 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
C2CD3-217ENST00000542452 PAPPAQ13219 1627 aa15.75■□□□□ 0.11
C2CD3-217ENST00000542452 IGSF1Q8N6C5 1336 aa15.74■□□□□ 0.11
C2CD3-217ENST00000542452 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
C2CD3-217ENST00000542452 ITGB4P16144 1822 aa15.74■□□□□ 0.11
C2CD3-217ENST00000542452 ZCRB1Q8TBF4 217 aaKnown RBP15.74■□□□□ 0.11
C2CD3-217ENST00000542452 DDX54Q8TDD1 881 aaKnown RBP15.74■□□□□ 0.11
C2CD3-217ENST00000542452 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
C2CD3-217ENST00000542452 LY75O60449 1722 aa15.73■□□□□ 0.11
C2CD3-217ENST00000542452 RAPGEF4Q8WZA2 1011 aa15.72■□□□□ 0.11
C2CD3-217ENST00000542452 PSDA5PKW4 1024 aaPredicted RBP15.71■□□□□ 0.11
C2CD3-217ENST00000542452 CNGB1Q14028 1251 aaPredicted RBP15.71■□□□□ 0.11
C2CD3-217ENST00000542452 LRP5O75197 1615 aa15.7■□□□□ 0.1
C2CD3-217ENST00000542452 PLSCR1O15162 318 aa15.7■□□□□ 0.1
C2CD3-217ENST00000542452 CYP27B1O15528 508 aa15.7■□□□□ 0.1
C2CD3-217ENST00000542452 AEBP1Q8IUX7 1158 aa15.7■□□□□ 0.1
C2CD3-217ENST00000542452 PROM2Q8N271 834 aa15.7■□□□□ 0.1
C2CD3-217ENST00000542452 CASZ1Q86V15 1759 aa15.7■□□□□ 0.1
C2CD3-217ENST00000542452 PCDH11XQ9BZA7 1347 aa15.69■□□□□ 0.1
C2CD3-217ENST00000542452 PCDH11YQ9BZA8 1340 aa15.69■□□□□ 0.1
C2CD3-217ENST00000542452 IL13P35225 146 aa15.69■□□□□ 0.1
C2CD3-217ENST00000542452 ANO8Q9HCE9 1232 aaPredicted RBP15.69■□□□□ 0.1
C2CD3-217ENST00000542452 KDRP35968 1356 aa15.68■□□□□ 0.1
C2CD3-217ENST00000542452 MTHFSP49914 203 aa15.68■□□□□ 0.1
C2CD3-217ENST00000542452 TUBGCP6Q96RT7 1819 aa15.68■□□□□ 0.1
C2CD3-217ENST00000542452 R3HDM1Q15032 1099 aaKnown RBP15.67■□□□□ 0.1
C2CD3-217ENST00000542452 VIRMAQ69YN4 1812 aaKnown RBP15.66■□□□□ 0.1
C2CD3-217ENST00000542452 PLEKHG2Q9H7P9 1386 aa15.66■□□□□ 0.1
C2CD3-217ENST00000542452 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
C2CD3-217ENST00000542452 TXNRD1Q16881 649 aa15.65■□□□□ 0.1
C2CD3-217ENST00000542452 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
C2CD3-217ENST00000542452 KDM6AO15550 1401 aaPredicted RBP15.63■□□□□ 0.09
C2CD3-217ENST00000542452 SYTL4Q96C24 671 aaPredicted RBP15.63■□□□□ 0.09
C2CD3-217ENST00000542452 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.09
C2CD3-217ENST00000542452 C5P01031 1676 aa15.63■□□□□ 0.09
C2CD3-217ENST00000542452 QSER1Q2KHR3 1735 aa15.63■□□□□ 0.09
C2CD3-217ENST00000542452 SCN11AQ9UI33 1791 aa15.62■□□□□ 0.09
C2CD3-217ENST00000542452 PHKG2P15735 406 aa15.62■□□□□ 0.09
C2CD3-217ENST00000542452 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
C2CD3-217ENST00000542452 SULT6B1Q6IMI4 303 aa15.62■□□□□ 0.09
C2CD3-217ENST00000542452 LRRC4BQ9NT99 713 aa15.62■□□□□ 0.09
C2CD3-217ENST00000542452 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
C2CD3-217ENST00000542452 PPP2R1AP30153 589 aa15.61■□□□□ 0.09
C2CD3-217ENST00000542452 ADAMTS7Q9UKP4 1686 aa15.6■□□□□ 0.09
C2CD3-217ENST00000542452 DIAPH1O60610 1272 aaKnown RBP15.59■□□□□ 0.09
C2CD3-217ENST00000542452 HMOX1P09601 288 aa15.59■□□□□ 0.09
C2CD3-217ENST00000542452 ZNF827Q17R98 1081 aa15.59■□□□□ 0.09
C2CD3-217ENST00000542452 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
C2CD3-217ENST00000542452 KCNQ4P56696 695 aa15.58■□□□□ 0.08
C2CD3-217ENST00000542452 NBPF14Q5TI25 921 aa15.58■□□□□ 0.08
C2CD3-217ENST00000542452 PDGFDQ9GZP0 370 aaPredicted RBP15.58■□□□□ 0.08
C2CD3-217ENST00000542452 ZNF530Q6P9A1 599 aaPredicted RBP15.57■□□□□ 0.08
C2CD3-217ENST00000542452 PIGBQ92521 554 aa15.57■□□□□ 0.08
C2CD3-217ENST00000542452 PALLDQ8WX93 1383 aa15.57■□□□□ 0.08
C2CD3-217ENST00000542452 SRCAPQ6ZRS2 3230 aa15.56■□□□□ 0.08
C2CD3-217ENST00000542452 PLEKHO1Q53GL0 409 aaPredicted RBP15.56■□□□□ 0.08
C2CD3-217ENST00000542452 MPRIPQ6WCQ1 1025 aa15.56■□□□□ 0.08
C2CD3-217ENST00000542452 MRC1P22897 1456 aa15.56■□□□□ 0.08
C2CD3-217ENST00000542452 C4BP0C0L5 1744 aa15.55■□□□□ 0.08
C2CD3-217ENST00000542452 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
C2CD3-217ENST00000542452 SLC15A2Q16348 729 aa15.55■□□□□ 0.08
C2CD3-217ENST00000542452 ZEB1P37275 1124 aaPredicted RBP15.54■□□□□ 0.08
C2CD3-217ENST00000542452 AMOTQ4VCS5 1084 aa15.54■□□□□ 0.08
C2CD3-217ENST00000542452 SLC27A3Q5K4L6 730 aa15.54■□□□□ 0.08
C2CD3-217ENST00000542452 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
C2CD3-217ENST00000542452 STK32BQ9NY57 414 aa15.54■□□□□ 0.08
C2CD3-217ENST00000542452 COL5A3P25940 1745 aaPredicted RBP15.54■□□□□ 0.08
C2CD3-217ENST00000542452 COL24A1Q17RW2 1714 aa15.54■□□□□ 0.08
C2CD3-217ENST00000542452 UBR3Q6ZT12 1888 aa15.53■□□□□ 0.08
C2CD3-217ENST00000542452 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
C2CD3-217ENST00000542452 CCNL1Q9UK58 526 aaPredicted RBP15.53■□□□□ 0.08
C2CD3-217ENST00000542452 SIPA1L3O60292 1781 aaPredicted RBP15.53■□□□□ 0.08
C2CD3-217ENST00000542452 ZNF831Q5JPB2 1677 aa15.53■□□□□ 0.08
C2CD3-217ENST00000542452 TJP1Q07157 1748 aa15.52■□□□□ 0.08
C2CD3-217ENST00000542452 MTHFSDQ2M296 383 aaKnown RBP15.52■□□□□ 0.08
C2CD3-217ENST00000542452 TMOD3Q9NYL9 352 aa15.52■□□□□ 0.08
C2CD3-217ENST00000542452 CICQ96RK0 1608 aaPredicted RBP15.52■□□□□ 0.08
C2CD3-217ENST00000542452 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
C2CD3-217ENST00000542452 RSPH6AQ9H0K4 717 aa15.51■□□□□ 0.07
C2CD3-217ENST00000542452 ASAP1Q9ULH1 1129 aa15.51■□□□□ 0.07
C2CD3-217ENST00000542452 HSP90AB1P08238 724 aaKnown RBP15.5■□□□□ 0.07
C2CD3-217ENST00000542452 CFAP53Q96M91 514 aa15.5■□□□□ 0.07
C2CD3-217ENST00000542452 ATG3Q9NT62 314 aa15.5■□□□□ 0.07
C2CD3-217ENST00000542452 UBR2Q8IWV8 1755 aa15.49■□□□□ 0.07
C2CD3-217ENST00000542452 PNPLA7Q6ZV29 1317 aa15.49■□□□□ 0.07
C2CD3-217ENST00000542452 ERVV-2B6SEH9 535 aa15.49■□□□□ 0.07
C2CD3-217ENST00000542452 AKAP4Q5JQC9 854 aa15.49■□□□□ 0.07
C2CD3-217ENST00000542452 C1orf141Q5JVX7 400 aa15.49■□□□□ 0.07
C2CD3-217ENST00000542452 DLG5Q8TDM6 1919 aa15.49■□□□□ 0.07
C2CD3-217ENST00000542452 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms