RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CABLES1Q8TDN4 633 aa22.1■■□□□ 1.13
TMEM50B-210ENST00000542230 RTL1A6NKG5 1358 aa22.09■■□□□ 1.13
TMEM50B-210ENST00000542230 ITPRIPQ8IWB1 547 aa22.09■■□□□ 1.13
TMEM50B-210ENST00000542230 RGPD2P0DJD1 1756 aa22.08■■□□□ 1.12
TMEM50B-210ENST00000542230 RTF1Q92541 710 aaKnown RBP22.07■■□□□ 1.12
TMEM50B-210ENST00000542230 USP19O94966 1318 aa22.07■■□□□ 1.12
TMEM50B-210ENST00000542230 CADPS2Q86UW7 1296 aa22.07■■□□□ 1.12
TMEM50B-210ENST00000542230 GAS2L2Q8NHY3 880 aa22.06■■□□□ 1.12
TMEM50B-210ENST00000542230 XIRP1Q702N8 1843 aaKnown RBP22.06■■□□□ 1.12
TMEM50B-210ENST00000542230 KIF16BQ96L93 1317 aa22.06■■□□□ 1.12
TMEM50B-210ENST00000542230 MSH6P52701 1360 aa22.06■■□□□ 1.12
TMEM50B-210ENST00000542230 SLIT3O75094 1523 aa22.06■■□□□ 1.12
TMEM50B-210ENST00000542230 RGS3P49796 1198 aa22.05■■□□□ 1.12
TMEM50B-210ENST00000542230 IL17REQ8NFR9 667 aa22.05■■□□□ 1.12
TMEM50B-210ENST00000542230 KIF1AQ12756 1690 aa22.04■■□□□ 1.12
TMEM50B-210ENST00000542230 MED1Q15648 1581 aaPredicted RBP22.04■■□□□ 1.12
TMEM50B-210ENST00000542230 GNAT3A8MTJ3 354 aa22.04■■□□□ 1.12
TMEM50B-210ENST00000542230 DCCP43146 1447 aa22.03■■□□□ 1.12
TMEM50B-210ENST00000542230 ANKRD24Q8TF21 1146 aa22.03■■□□□ 1.12
TMEM50B-210ENST00000542230 IPO8O15397 1037 aaKnown RBP22.03■■□□□ 1.12
TMEM50B-210ENST00000542230 TSPYL4Q9UJ04 414 aa22.03■■□□□ 1.12
TMEM50B-210ENST00000542230 BRPF1P55201 1214 aaPredicted RBP22.02■■□□□ 1.12
TMEM50B-210ENST00000542230 ZNF428Q96B54 188 aa22.02■■□□□ 1.12
TMEM50B-210ENST00000542230 PDE4AP27815 886 aa22.02■■□□□ 1.11
TMEM50B-210ENST00000542230 NCOA3Q9Y6Q9 1424 aa22.01■■□□□ 1.11
TMEM50B-210ENST00000542230 BRINP3Q76B58 766 aa22.01■■□□□ 1.11
TMEM50B-210ENST00000542230 ALS2Q96Q42 1657 aa22.01■■□□□ 1.11
TMEM50B-210ENST00000542230 MS4A1P11836 297 aa21.99■■□□□ 1.11
TMEM50B-210ENST00000542230 LGR6Q9HBX8 967 aa21.99■■□□□ 1.11
TMEM50B-210ENST00000542230 DDX19BQ9UMR2 479 aa21.99■■□□□ 1.11
TMEM50B-210ENST00000542230 MAP3K5Q99683 1374 aa21.99■■□□□ 1.11
TMEM50B-210ENST00000542230 NPHP3Q7Z494 1330 aa21.99■■□□□ 1.11
TMEM50B-210ENST00000542230 RGPD5Q99666 1765 aa21.98■■□□□ 1.11
TMEM50B-210ENST00000542230 CHRNA2Q15822 529 aa21.98■■□□□ 1.11
TMEM50B-210ENST00000542230 ZBTB40Q9NUA8 1239 aa21.98■■□□□ 1.11
TMEM50B-210ENST00000542230 PHRF1Q9P1Y6 1649 aaKnown RBP21.97■■□□□ 1.11
TMEM50B-210ENST00000542230 BACH2Q9BYV9 841 aa21.97■■□□□ 1.11
TMEM50B-210ENST00000542230 MSH5O43196 834 aa21.96■■□□□ 1.11
TMEM50B-210ENST00000542230 PXDNQ92626 1479 aa21.96■■□□□ 1.11
TMEM50B-210ENST00000542230 C1orf115Q9H7X2 142 aa21.96■■□□□ 1.11
TMEM50B-210ENST00000542230 KIAA0232Q92628 1395 aa21.95■■□□□ 1.1
TMEM50B-210ENST00000542230 HTATSF1O43719 755 aaKnown RBP21.95■■□□□ 1.1
TMEM50B-210ENST00000542230 SLAIN2Q9P270 581 aa21.95■■□□□ 1.1
TMEM50B-210ENST00000542230 ARHGAP45Q92619 1136 aa21.95■■□□□ 1.1
TMEM50B-210ENST00000542230 NECTIN2Q92692 538 aa21.95■■□□□ 1.1
TMEM50B-210ENST00000542230 SPATA31A3Q5VYP0 1347 aa21.94■■□□□ 1.1
TMEM50B-210ENST00000542230 AAMPQ13685 434 aa21.94■■□□□ 1.1
TMEM50B-210ENST00000542230 MPRIPQ6WCQ1 1025 aa21.94■■□□□ 1.1
TMEM50B-210ENST00000542230 ERBB3P21860 1342 aa21.93■■□□□ 1.1
TMEM50B-210ENST00000542230 ZBTB7BO15156 539 aaPredicted RBP21.93■■□□□ 1.1
TMEM50B-210ENST00000542230 G2E3Q7L622 706 aa21.93■■□□□ 1.1
TMEM50B-210ENST00000542230 ABCC4O15439 1325 aa21.93■■□□□ 1.1
TMEM50B-210ENST00000542230 TNS3Q68CZ2 1445 aa21.93■■□□□ 1.1
TMEM50B-210ENST00000542230 SLC4A2P04920 1241 aa21.92■■□□□ 1.1
TMEM50B-210ENST00000542230 ZNF530Q6P9A1 599 aaPredicted RBP21.92■■□□□ 1.1
TMEM50B-210ENST00000542230 RWDD1Q9H446 243 aaPredicted RBP21.92■■□□□ 1.1
TMEM50B-210ENST00000542230 PDZRN3Q9UPQ7 1066 aa21.92■■□□□ 1.1
TMEM50B-210ENST00000542230 LRRC37A3O60309 1634 aa21.92■■□□□ 1.1
TMEM50B-210ENST00000542230 TAF7Q15545 349 aaPredicted RBP21.91■■□□□ 1.1
TMEM50B-210ENST00000542230 KCNQ3O43525 872 aa21.9■■□□□ 1.1
TMEM50B-210ENST00000542230 RGS12O14924 1447 aa21.9■■□□□ 1.1
TMEM50B-210ENST00000542230 NLRP2Q9NX02 1062 aa21.9■■□□□ 1.1
TMEM50B-210ENST00000542230 CEMIPQ8WUJ3 1361 aa21.89■■□□□ 1.09
TMEM50B-210ENST00000542230 NPM2Q86SE8 214 aaKnown RBP21.89■■□□□ 1.09
TMEM50B-210ENST00000542230 NCAPD2Q15021 1401 aa21.88■■□□□ 1.09
TMEM50B-210ENST00000542230 PLEKHO1Q53GL0 409 aaPredicted RBP21.88■■□□□ 1.09
TMEM50B-210ENST00000542230 API5Q9BZZ5 524 aaKnown RBP21.88■■□□□ 1.09
TMEM50B-210ENST00000542230 C8orf34Q49A92 452 aa21.87■■□□□ 1.09
TMEM50B-210ENST00000542230 F6X3S4 739 aa21.87■■□□□ 1.09
TMEM50B-210ENST00000542230 HDAC1Q13547 482 aaPredicted RBP21.86■■□□□ 1.09
TMEM50B-210ENST00000542230 AKAP4Q5JQC9 854 aa21.86■■□□□ 1.09
TMEM50B-210ENST00000542230 COL18A1P39060 1754 aa21.85■■□□□ 1.09
TMEM50B-210ENST00000542230 CSB-PGBD3P0DP91 1061 aa21.84■■□□□ 1.09
TMEM50B-210ENST00000542230 SIRT2Q8IXJ6 389 aa21.84■■□□□ 1.09
TMEM50B-210ENST00000542230 SOS2Q07890 1332 aaPredicted RBP21.83■■□□□ 1.09
TMEM50B-210ENST00000542230 AMOTQ4VCS5 1084 aa21.83■■□□□ 1.08
TMEM50B-210ENST00000542230 RNMTO43148 476 aaKnown RBP21.82■■□□□ 1.08
TMEM50B-210ENST00000542230 HAP1P54257 671 aaPredicted RBP21.82■■□□□ 1.08
TMEM50B-210ENST00000542230 C1orf141Q5JVX7 400 aa21.82■■□□□ 1.08
TMEM50B-210ENST00000542230 CRYBG1Q9Y4K1 1723 aa21.82■■□□□ 1.08
TMEM50B-210ENST00000542230 FAM161AQ3B820 660 aa21.81■■□□□ 1.08
TMEM50B-210ENST00000542230 INTS3Q68E01 1043 aaKnown RBP21.81■■□□□ 1.08
TMEM50B-210ENST00000542230 CAMTA1Q9Y6Y1 1673 aa21.81■■□□□ 1.08
TMEM50B-210ENST00000542230 TEFQ10587 303 aa21.81■■□□□ 1.08
TMEM50B-210ENST00000542230 EIF4A1P60842 406 aaKnown RBP21.8■■□□□ 1.08
TMEM50B-210ENST00000542230 SLC4A10Q6U841 1118 aa21.8■■□□□ 1.08
TMEM50B-210ENST00000542230 MEGF6O75095 1541 aa21.8■■□□□ 1.08
TMEM50B-210ENST00000542230 BTBD11A6QL63 1104 aa21.8■■□□□ 1.08
TMEM50B-210ENST00000542230 SMC5Q8IY18 1101 aa21.8■■□□□ 1.08
TMEM50B-210ENST00000542230 LMO7Q8WWI1 1683 aa21.79■■□□□ 1.08
TMEM50B-210ENST00000542230 EIF2S2P20042 333 aaKnown RBP21.79■■□□□ 1.08
TMEM50B-210ENST00000542230 RAPGEF4Q8WZA2 1011 aa21.79■■□□□ 1.08
TMEM50B-210ENST00000542230 PTPRCP08575 1304 aa21.78■■□□□ 1.08
TMEM50B-210ENST00000542230 MEIS3Q99687 375 aa21.78■■□□□ 1.08
TMEM50B-210ENST00000542230 STK31Q9BXU1 1019 aa21.78■■□□□ 1.08
TMEM50B-210ENST00000542230 FLIIQ13045 1269 aa21.77■■□□□ 1.08
TMEM50B-210ENST00000542230 CCDC30Q5VVM6 783 aa21.77■■□□□ 1.08
TMEM50B-210ENST00000542230 PHAXQ9H814 394 aaKnown RBP21.77■■□□□ 1.08
TMEM50B-210ENST00000542230 PRDM11Q9NQV5 511 aa21.77■■□□□ 1.08
TMEM50B-210ENST00000542230 PRAMEF22A3QJZ6 481 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms