RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 SBF2Q86WG5 1849 aa18.59■□□□□ 0.57
TNFSF13B-206ENST00000542136 SPG7Q9UQ90 795 aa18.59■□□□□ 0.57
TNFSF13B-206ENST00000542136 KDRP35968 1356 aa18.58■□□□□ 0.57
TNFSF13B-206ENST00000542136 PLSCR1O15162 318 aa18.58■□□□□ 0.56
TNFSF13B-206ENST00000542136 DDX54Q8TDD1 881 aaKnown RBP18.58■□□□□ 0.56
TNFSF13B-206ENST00000542136 TNS1Q9HBL0 1735 aaKnown RBP18.57■□□□□ 0.56
TNFSF13B-206ENST00000542136 PCDH11XQ9BZA7 1347 aa18.57■□□□□ 0.56
TNFSF13B-206ENST00000542136 PCDH11YQ9BZA8 1340 aa18.57■□□□□ 0.56
TNFSF13B-206ENST00000542136 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
TNFSF13B-206ENST00000542136 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
TNFSF13B-206ENST00000542136 RALBP1Q15311 655 aa18.57■□□□□ 0.56
TNFSF13B-206ENST00000542136 CFAP53Q96M91 514 aa18.57■□□□□ 0.56
TNFSF13B-206ENST00000542136 APBA3O96018 575 aa18.56■□□□□ 0.56
TNFSF13B-206ENST00000542136 PKD1L3Q7Z443 1732 aa18.55■□□□□ 0.56
TNFSF13B-206ENST00000542136 ZNF316A6NFI3 1004 aaPredicted RBP18.55■□□□□ 0.56
TNFSF13B-206ENST00000542136 NKX1-1Q15270 411 aaPredicted RBP18.55■□□□□ 0.56
TNFSF13B-206ENST00000542136 AMOTQ4VCS5 1084 aa18.55■□□□□ 0.56
TNFSF13B-206ENST00000542136 CAMKK2Q96RR4 588 aa18.55■□□□□ 0.56
TNFSF13B-206ENST00000542136 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
TNFSF13B-206ENST00000542136 DEFB132Q7Z7B7 95 aa18.54■□□□□ 0.56
TNFSF13B-206ENST00000542136 COL3A1P02461 1466 aaPredicted RBP18.53■□□□□ 0.56
TNFSF13B-206ENST00000542136 CYP27B1O15528 508 aa18.52■□□□□ 0.56
TNFSF13B-206ENST00000542136 EN1Q05925 392 aaPredicted RBP18.52■□□□□ 0.56
TNFSF13B-206ENST00000542136 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.56
TNFSF13B-206ENST00000542136 SULT6B1Q6IMI4 303 aa18.52■□□□□ 0.56
TNFSF13B-206ENST00000542136 NHSQ6T4R5 1651 aa18.52■□□□□ 0.56
TNFSF13B-206ENST00000542136 RGPD3A6NKT7 1758 aaPredicted RBP18.52■□□□□ 0.55
TNFSF13B-206ENST00000542136 RGPD4Q7Z3J3 1758 aa18.52■□□□□ 0.55
TNFSF13B-206ENST00000542136 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
TNFSF13B-206ENST00000542136 IFNL2Q8IZJ0 200 aa18.5■□□□□ 0.55
TNFSF13B-206ENST00000542136 NUDCQ9Y266 331 aa18.5■□□□□ 0.55
TNFSF13B-206ENST00000542136 KCNQ2O43526 872 aa18.49■□□□□ 0.55
TNFSF13B-206ENST00000542136 HSP90AB1P08238 724 aaKnown RBP18.48■□□□□ 0.55
TNFSF13B-206ENST00000542136 PHKG2P15735 406 aa18.48■□□□□ 0.55
TNFSF13B-206ENST00000542136 PTF1AQ7RTS3 328 aa18.48■□□□□ 0.55
TNFSF13B-206ENST00000542136 AEBP1Q8IUX7 1158 aa18.48■□□□□ 0.55
TNFSF13B-206ENST00000542136 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
TNFSF13B-206ENST00000542136 EZH2Q15910 746 aaKnown RBP18.47■□□□□ 0.55
TNFSF13B-206ENST00000542136 ACSBG1Q96GR2 724 aa18.47■□□□□ 0.55
TNFSF13B-206ENST00000542136 HMGB2P26583 209 aaKnown RBP18.45■□□□□ 0.54
TNFSF13B-206ENST00000542136 DCAF5Q96JK2 942 aa18.45■□□□□ 0.54
TNFSF13B-206ENST00000542136 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
TNFSF13B-206ENST00000542136 U2SURPO15042 1029 aaKnown RBP18.44■□□□□ 0.54
TNFSF13B-206ENST00000542136 FCHSD2O94868 740 aa18.44■□□□□ 0.54
TNFSF13B-206ENST00000542136 MYBBP1AQ9BQG0 1328 aaKnown RBP18.44■□□□□ 0.54
TNFSF13B-206ENST00000542136 RREB1Q92766 1687 aa18.44■□□□□ 0.54
TNFSF13B-206ENST00000542136 HMOX1P09601 288 aa18.43■□□□□ 0.54
TNFSF13B-206ENST00000542136 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
TNFSF13B-206ENST00000542136 ZNF530Q6P9A1 599 aaPredicted RBP18.43■□□□□ 0.54
TNFSF13B-206ENST00000542136 PROM2Q8N271 834 aa18.43■□□□□ 0.54
TNFSF13B-206ENST00000542136 PRKRIP1Q9H875 184 aaPredicted RBP18.43■□□□□ 0.54
TNFSF13B-206ENST00000542136 BTAF1O14981 1849 aa18.43■□□□□ 0.54
TNFSF13B-206ENST00000542136 DOT1LQ8TEK3 1739 aa18.43■□□□□ 0.54
TNFSF13B-206ENST00000542136 SYTL4Q96C24 671 aaPredicted RBP18.42■□□□□ 0.54
TNFSF13B-206ENST00000542136 KAT6BQ8WYB5 2073 aa18.42■□□□□ 0.54
TNFSF13B-206ENST00000542136 TXNRD1Q16881 649 aa18.41■□□□□ 0.54
TNFSF13B-206ENST00000542136 AKAP4Q5JQC9 854 aa18.41■□□□□ 0.54
TNFSF13B-206ENST00000542136 SLC27A3Q5K4L6 730 aa18.41■□□□□ 0.54
TNFSF13B-206ENST00000542136 NBPF14Q5TI25 921 aa18.41■□□□□ 0.54
TNFSF13B-206ENST00000542136 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
TNFSF13B-206ENST00000542136 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
TNFSF13B-206ENST00000542136 U2AF1L5P0DN76 240 aaPredicted RBP18.39■□□□□ 0.53
TNFSF13B-206ENST00000542136 U2AF1Q01081 240 aaKnown RBP eCLIP18.39■□□□□ 0.53
TNFSF13B-206ENST00000542136 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
TNFSF13B-206ENST00000542136 PIGBQ92521 554 aa18.38■□□□□ 0.53
TNFSF13B-206ENST00000542136 TMOD3Q9NYL9 352 aa18.38■□□□□ 0.53
TNFSF13B-206ENST00000542136 NUP188Q5SRE5 1749 aa18.37■□□□□ 0.53
TNFSF13B-206ENST00000542136 ITGB4P16144 1822 aa18.37■□□□□ 0.53
TNFSF13B-206ENST00000542136 MTHFSDQ2M296 383 aaKnown RBP18.37■□□□□ 0.53
TNFSF13B-206ENST00000542136 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
TNFSF13B-206ENST00000542136 GAS2L2Q8NHY3 880 aa18.37■□□□□ 0.53
TNFSF13B-206ENST00000542136 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
TNFSF13B-206ENST00000542136 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
TNFSF13B-206ENST00000542136 KDM6AO15550 1401 aaPredicted RBP18.35■□□□□ 0.53
TNFSF13B-206ENST00000542136 LY75O60449 1722 aa18.35■□□□□ 0.53
TNFSF13B-206ENST00000542136 GNAT3A8MTJ3 354 aa18.33■□□□□ 0.52
TNFSF13B-206ENST00000542136 CABP4P57796 275 aa18.33■□□□□ 0.52
TNFSF13B-206ENST00000542136 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.52
TNFSF13B-206ENST00000542136 ADAMTS7Q9UKP4 1686 aa18.33■□□□□ 0.52
TNFSF13B-206ENST00000542136 SCN11AQ9UI33 1791 aa18.32■□□□□ 0.52
TNFSF13B-206ENST00000542136 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
TNFSF13B-206ENST00000542136 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
TNFSF13B-206ENST00000542136 NEFMP07197 916 aa18.32■□□□□ 0.52
TNFSF13B-206ENST00000542136 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
TNFSF13B-206ENST00000542136 PALLDQ8WX93 1383 aa18.31■□□□□ 0.52
TNFSF13B-206ENST00000542136 NFATC2IPQ8NCF5 419 aa18.31■□□□□ 0.52
TNFSF13B-206ENST00000542136 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
TNFSF13B-206ENST00000542136 MAP3K5Q99683 1374 aa18.3■□□□□ 0.52
TNFSF13B-206ENST00000542136 R3HDM1Q15032 1099 aaKnown RBP18.3■□□□□ 0.52
TNFSF13B-206ENST00000542136 SLC15A2Q16348 729 aa18.3■□□□□ 0.52
TNFSF13B-206ENST00000542136 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
TNFSF13B-206ENST00000542136 LGR6Q9HBX8 967 aa18.3■□□□□ 0.52
TNFSF13B-206ENST00000542136 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
TNFSF13B-206ENST00000542136 STK32BQ9NY57 414 aa18.3■□□□□ 0.52
TNFSF13B-206ENST00000542136 CCNL1Q9UK58 526 aaPredicted RBP18.3■□□□□ 0.52
TNFSF13B-206ENST00000542136 MRC1P22897 1456 aa18.29■□□□□ 0.52
TNFSF13B-206ENST00000542136 ASAP1Q9ULH1 1129 aa18.29■□□□□ 0.52
TNFSF13B-206ENST00000542136 PAPPAQ13219 1627 aa18.29■□□□□ 0.52
TNFSF13B-206ENST00000542136 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
TNFSF13B-206ENST00000542136 ANP32CO43423 234 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms