RNA–Protein interactions for RNA: ENST00000541664.5

NPIPB5-220, Transcript of nuclear pore complex interacting protein family member B5, human

TSL 3

Gene NPIPB5, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB5-220	ENST00000541664	TFCP2L1	Q9NZI6	479 aa		11.19	□□□□□ -0.62
NPIPB5-220	ENST00000541664	KIAA1210	Q9ULL0	1709 aa		11.18	□□□□□ -0.62
NPIPB5-220	ENST00000541664	CIC	Q96RK0	1608 aa	Predicted RBP	11.18	□□□□□ -0.62
NPIPB5-220	ENST00000541664	SRPK2	P78362	688 aa	Known RBP	11.18	□□□□□ -0.62
NPIPB5-220	ENST00000541664	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.18	□□□□□ -0.62
NPIPB5-220	ENST00000541664	DOT1L	Q8TEK3	1739 aa		11.18	□□□□□ -0.62
NPIPB5-220	ENST00000541664	NPM3	O75607	178 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB5-220	ENST00000541664	KCNH5	Q8NCM2	988 aa		11.17	□□□□□ -0.62
NPIPB5-220	ENST00000541664	ERBB3	P21860	1342 aa		11.16	□□□□□ -0.62
NPIPB5-220	ENST00000541664	SOX12	O15370	315 aa		11.16	□□□□□ -0.62
NPIPB5-220	ENST00000541664	KCNQ4	P56696	695 aa		11.16	□□□□□ -0.62
NPIPB5-220	ENST00000541664	STAC3	Q96MF2	364 aa		11.16	□□□□□ -0.62
NPIPB5-220	ENST00000541664	BCL11A	Q9H165	835 aa		11.16	□□□□□ -0.62
NPIPB5-220	ENST00000541664	CABP2	Q9NPB3	220 aa		11.16	□□□□□ -0.62
NPIPB5-220	ENST00000541664	CD2AP	Q9Y5K6	639 aa		11.16	□□□□□ -0.62
NPIPB5-220	ENST00000541664	KAT6B	Q8WYB5	2073 aa		11.15	□□□□□ -0.62
NPIPB5-220	ENST00000541664	IL2RB	P14784	551 aa		11.15	□□□□□ -0.62
NPIPB5-220	ENST00000541664	PRELP	P51888	382 aa		11.15	□□□□□ -0.62
NPIPB5-220	ENST00000541664	CABP1	Q9NZU7	370 aa		11.15	□□□□□ -0.62
NPIPB5-220	ENST00000541664	NSD2	O96028	1365 aa		11.15	□□□□□ -0.63
NPIPB5-220	ENST00000541664	USP54	Q70EL1	1684 aa		11.14	□□□□□ -0.63
NPIPB5-220	ENST00000541664	TMEM132A	Q24JP5	1023 aa		11.14	□□□□□ -0.63
NPIPB5-220	ENST00000541664	MSL1	Q68DK7	614 aa		11.14	□□□□□ -0.63
NPIPB5-220	ENST00000541664	COL23A1	Q86Y22	540 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPB5-220	ENST00000541664	LTN1	O94822	1766 aa		11.13	□□□□□ -0.63
NPIPB5-220	ENST00000541664	TNS4	Q8IZW8	715 aa		11.13	□□□□□ -0.63
NPIPB5-220	ENST00000541664	C5	P01031	1676 aa		11.13	□□□□□ -0.63
NPIPB5-220	ENST00000541664	TTC21B	Q7Z4L5	1316 aa		11.12	□□□□□ -0.63
NPIPB5-220	ENST00000541664	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.12	□□□□□ -0.63
NPIPB5-220	ENST00000541664	TOMM70	O94826	608 aa		11.12	□□□□□ -0.63
NPIPB5-220	ENST00000541664	JMY	Q8N9B5	988 aa		11.12	□□□□□ -0.63
NPIPB5-220	ENST00000541664	NLRP2	Q9NX02	1062 aa		11.12	□□□□□ -0.63
NPIPB5-220	ENST00000541664	ANKRD36B	Q8N2N9	1353 aa		11.12	□□□□□ -0.63
NPIPB5-220	ENST00000541664	IGSF1	Q8N6C5	1336 aa		11.11	□□□□□ -0.63
NPIPB5-220	ENST00000541664	KLRG1	Q96E93	195 aa		11.11	□□□□□ -0.63
NPIPB5-220	ENST00000541664	MON2	Q7Z3U7	1717 aa		11.11	□□□□□ -0.63
NPIPB5-220	ENST00000541664	FAM208A	Q9UK61	1670 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB5-220	ENST00000541664	PCNT	O95613	3336 aa		11.11	□□□□□ -0.63
NPIPB5-220	ENST00000541664	TTC21A	Q8NDW8	1320 aa		11.1	□□□□□ -0.63
NPIPB5-220	ENST00000541664	TOGARAM1	Q9Y4F4	1720 aa		11.1	□□□□□ -0.63
NPIPB5-220	ENST00000541664	CCNL1	Q9UK58	526 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPB5-220	ENST00000541664	WWC3	Q9ULE0	1092 aa		11.1	□□□□□ -0.63
NPIPB5-220	ENST00000541664	SLC34A2	O95436	690 aa		11.09	□□□□□ -0.63
NPIPB5-220	ENST00000541664	HTRA3	P83110	453 aa		11.09	□□□□□ -0.63
NPIPB5-220	ENST00000541664	SYTL4	Q96C24	671 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPB5-220	ENST00000541664	TAF1L	Q8IZX4	1826 aa		11.08	□□□□□ -0.64
NPIPB5-220	ENST00000541664	DDX54	Q8TDD1	881 aa	Known RBP	11.08	□□□□□ -0.64
NPIPB5-220	ENST00000541664	KIAA1551	Q9HCM1	1747 aa		11.07	□□□□□ -0.64
NPIPB5-220	ENST00000541664	PRIM1	P49642	420 aa	Known RBP	11.07	□□□□□ -0.64
NPIPB5-220	ENST00000541664	NBPF1	Q3BBV0	1214 aa		11.07	□□□□□ -0.64
NPIPB5-220	ENST00000541664	ANKRD24	Q8TF21	1146 aa		11.07	□□□□□ -0.64
NPIPB5-220	ENST00000541664	USP31	Q70CQ4	1352 aa		11.06	□□□□□ -0.64
NPIPB5-220	ENST00000541664	RAB3GAP2	Q9H2M9	1393 aa		11.06	□□□□□ -0.64
NPIPB5-220	ENST00000541664	RBM46	Q8TBY0	533 aa	Known RBP	11.06	□□□□□ -0.64
NPIPB5-220	ENST00000541664	ZNF692	Q9BU19	519 aa	Predicted RBP	11.06	□□□□□ -0.64
NPIPB5-220	ENST00000541664	NMRK2	Q9NPI5	230 aa		11.06	□□□□□ -0.64
NPIPB5-220	ENST00000541664	USP47	Q96K76	1375 aa		11.05	□□□□□ -0.64
NPIPB5-220	ENST00000541664	C4B	P0C0L5	1744 aa		11.05	□□□□□ -0.64
NPIPB5-220	ENST00000541664	UBR3	Q6ZT12	1888 aa		11.05	□□□□□ -0.64
NPIPB5-220	ENST00000541664	KTN1	Q86UP2	1357 aa	Known RBP	11.04	□□□□□ -0.64
NPIPB5-220	ENST00000541664	VSIG10	Q8N0Z9	540 aa		11.04	□□□□□ -0.64
NPIPB5-220	ENST00000541664	FLAD1	Q8NFF5	587 aa		11.04	□□□□□ -0.64
NPIPB5-220	ENST00000541664	PXDNL	A1KZ92	1463 aa		11.04	□□□□□ -0.64
NPIPB5-220	ENST00000541664	KIF13B	Q9NQT8	1826 aa		11.04	□□□□□ -0.64
NPIPB5-220	ENST00000541664	MEGF6	O75095	1541 aa		11.04	□□□□□ -0.64
NPIPB5-220	ENST00000541664	PKD1L3	Q7Z443	1732 aa		11.04	□□□□□ -0.64
NPIPB5-220	ENST00000541664	EVC2	Q86UK5	1308 aa		11.03	□□□□□ -0.64
NPIPB5-220	ENST00000541664	FSTL1	Q12841	308 aa		11.02	□□□□□ -0.65
NPIPB5-220	ENST00000541664	AMIGO3	Q86WK7	504 aa		11.02	□□□□□ -0.65
NPIPB5-220	ENST00000541664	C10orf71	Q711Q0	1435 aa		11.01	□□□□□ -0.65
NPIPB5-220	ENST00000541664	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.01	□□□□□ -0.65
NPIPB5-220	ENST00000541664	C1QBP	Q07021	282 aa	Known RBP	11.01	□□□□□ -0.65
NPIPB5-220	ENST00000541664	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.01	□□□□□ -0.65
NPIPB5-220	ENST00000541664	PALLD	Q8WX93	1383 aa		11.01	□□□□□ -0.65
NPIPB5-220	ENST00000541664	PLEKHG2	Q9H7P9	1386 aa		11.01	□□□□□ -0.65
NPIPB5-220	ENST00000541664	SBNO2	Q9Y2G9	1366 aa		11.01	□□□□□ -0.65
NPIPB5-220	ENST00000541664	RGPD2	P0DJD1	1756 aa		11	□□□□□ -0.65
NPIPB5-220	ENST00000541664	CD163L1	Q9NR16	1453 aa		11	□□□□□ -0.65
NPIPB5-220	ENST00000541664	BRCA1	P38398	1863 aa	Known RBP	11	□□□□□ -0.65
NPIPB5-220	ENST00000541664	HSPA1A	P0DMV8	641 aa	Known RBP	11	□□□□□ -0.65
NPIPB5-220	ENST00000541664	HSPA1B	P0DMV9	641 aa	Known RBP	11	□□□□□ -0.65
NPIPB5-220	ENST00000541664	NME9	Q86XW9	330 aa		11	□□□□□ -0.65
NPIPB5-220	ENST00000541664	NSD3	Q9BZ95	1437 aa		11	□□□□□ -0.65
NPIPB5-220	ENST00000541664	KCP	Q6ZWJ8	1503 aa		10.99	□□□□□ -0.65
NPIPB5-220	ENST00000541664	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
NPIPB5-220	ENST00000541664	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.99	□□□□□ -0.65
NPIPB5-220	ENST00000541664	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.98	□□□□□ -0.65
NPIPB5-220	ENST00000541664	PHF14	O94880	888 aa		10.98	□□□□□ -0.65
NPIPB5-220	ENST00000541664	ZCRB1	Q8TBF4	217 aa	Known RBP	10.98	□□□□□ -0.65
NPIPB5-220	ENST00000541664	AK7	Q96M32	723 aa		10.98	□□□□□ -0.65
NPIPB5-220	ENST00000541664	HMGB2	P26583	209 aa	Known RBP	10.97	□□□□□ -0.65
NPIPB5-220	ENST00000541664	SMIM5	Q71RC9	77 aa		10.97	□□□□□ -0.65
NPIPB5-220	ENST00000541664	IP6K1	Q92551	441 aa		10.97	□□□□□ -0.65
NPIPB5-220	ENST00000541664	LTV1	Q96GA3	475 aa	Predicted RBP	10.97	□□□□□ -0.65
NPIPB5-220	ENST00000541664	BCS1L	Q9Y276	419 aa		10.97	□□□□□ -0.65
NPIPB5-220	ENST00000541664	ARFGEF1	Q9Y6D6	1849 aa		10.97	□□□□□ -0.65
NPIPB5-220	ENST00000541664	MAP2	P11137	1827 aa	Known RBP	10.96	□□□□□ -0.65
NPIPB5-220	ENST00000541664	SSFA2	P28290	1259 aa		10.96	□□□□□ -0.65
NPIPB5-220	ENST00000541664	ITGB4	P16144	1822 aa		10.95	□□□□□ -0.66
NPIPB5-220	ENST00000541664	EDC4	Q6P2E9	1401 aa	Known RBP	10.95	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms