RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 DZIP1Q86YF9 867 aaKnown RBP11.75□□□□□ -0.53
TRERF1-205ENST00000541110 PRDM11Q9NQV5 511 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 MINDY4BA8MYZ0 360 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 LMAN1P49257 510 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 FAM43AQ8N2R8 423 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 FEZ1Q99689 392 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 TSPY26PQ9H489 355 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 IDH1O75874 414 aaKnown RBP11.75□□□□□ -0.53
TRERF1-205ENST00000541110 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
TRERF1-205ENST00000541110 GSTTP1A0A1W2PQM5 241 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 BTBD11A6QL63 1104 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 GNAI3P08754 354 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 CAVIN4Q5BKX8 364 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 LRRCC1Q9C099 1032 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 CFAP45Q9UL16 551 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 EIF3JO75822 258 aaKnown RBP11.75□□□□□ -0.53
TRERF1-205ENST00000541110 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
TRERF1-205ENST00000541110 HOOK3Q86VS8 718 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
TRERF1-205ENST00000541110 PUF60Q9UHX1 559 aaKnown RBP11.74□□□□□ -0.53
TRERF1-205ENST00000541110 CDKL5O76039 1030 aa11.74□□□□□ -0.53
TRERF1-205ENST00000541110 NEK4P51957 841 aa11.74□□□□□ -0.53
TRERF1-205ENST00000541110 TNMDQ9H2S6 317 aa11.74□□□□□ -0.53
TRERF1-205ENST00000541110 STARD3NLO95772 234 aa11.74□□□□□ -0.53
TRERF1-205ENST00000541110 EHMT1Q9H9B1 1298 aa11.74□□□□□ -0.53
TRERF1-205ENST00000541110 CCDC178Q5BJE1 867 aa11.74□□□□□ -0.53
TRERF1-205ENST00000541110 TMEM132EQ6IEE7 984 aa11.74□□□□□ -0.53
TRERF1-205ENST00000541110 BAZ1AQ9NRL2 1556 aaPredicted RBP11.73□□□□□ -0.53
TRERF1-205ENST00000541110 ZWINTO95229 277 aa11.73□□□□□ -0.53
TRERF1-205ENST00000541110 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
TRERF1-205ENST00000541110 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
TRERF1-205ENST00000541110 ANKRD1Q15327 319 aa11.73□□□□□ -0.53
TRERF1-205ENST00000541110 PANK1Q8TE04 598 aa11.73□□□□□ -0.53
TRERF1-205ENST00000541110 SAMM50Q9Y512 469 aa11.73□□□□□ -0.53
TRERF1-205ENST00000541110 BCCIPQ9P287 314 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRERF1-205ENST00000541110 SERPINA10Q9UK55 444 aa11.73□□□□□ -0.53
TRERF1-205ENST00000541110 FERP16591 822 aa11.73□□□□□ -0.53
TRERF1-205ENST00000541110 MPHOSPH6Q99547 160 aaKnown RBP11.73□□□□□ -0.53
TRERF1-205ENST00000541110 TSG101Q99816 390 aa11.73□□□□□ -0.53
TRERF1-205ENST00000541110 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRERF1-205ENST00000541110 FHOD3Q2V2M9 1422 aa11.72□□□□□ -0.53
TRERF1-205ENST00000541110 AIDAQ96BJ3 306 aa11.72□□□□□ -0.53
TRERF1-205ENST00000541110 USP47Q96K76 1375 aa11.72□□□□□ -0.53
TRERF1-205ENST00000541110 AACSQ86V21 672 aa11.72□□□□□ -0.53
TRERF1-205ENST00000541110 METTL24Q5JXM2 366 aa11.72□□□□□ -0.53
TRERF1-205ENST00000541110 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRERF1-205ENST00000541110 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRERF1-205ENST00000541110 SLC4A8Q2Y0W8 1093 aa11.71□□□□□ -0.53
TRERF1-205ENST00000541110 ZNF444Q8N0Y2 327 aaPredicted RBP11.71□□□□□ -0.53
TRERF1-205ENST00000541110 CBFA2T2O43439 604 aa11.71□□□□□ -0.53
TRERF1-205ENST00000541110 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
TRERF1-205ENST00000541110 RAD54L2Q9Y4B4 1467 aa11.71□□□□□ -0.53
TRERF1-205ENST00000541110 PRPF40AO75400 957 aaKnown RBP11.71□□□□□ -0.54
TRERF1-205ENST00000541110 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.54
TRERF1-205ENST00000541110 TSNARE1Q96NA8 513 aa11.71□□□□□ -0.54
TRERF1-205ENST00000541110 CEP131Q9UPN4 1083 aa11.71□□□□□ -0.54
TRERF1-205ENST00000541110 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
TRERF1-205ENST00000541110 CACNA2D4Q7Z3S7 1137 aa11.7□□□□□ -0.54
TRERF1-205ENST00000541110 OTUD6BQ8N6M0 293 aa11.7□□□□□ -0.54
TRERF1-205ENST00000541110 DNA2P51530 1060 aa11.7□□□□□ -0.54
TRERF1-205ENST00000541110 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
TRERF1-205ENST00000541110 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
TRERF1-205ENST00000541110 PTPRGP23470 1445 aa11.7□□□□□ -0.54
TRERF1-205ENST00000541110 BICD1Q96G01 975 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 NGLY1Q96IV0 654 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 FERMT1Q9BQL6 677 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 MYO1BO43795 1136 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 TMCO5BA8MYB1 307 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 CKAP2LQ8IYA6 745 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 SH3BP5O60239 455 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 USP8P40818 1118 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 CCDC148Q8NFR7 591 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 ARHGAP5Q13017 1502 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 WASF1Q92558 559 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 SYCP3Q8IZU3 236 aa11.69□□□□□ -0.54
TRERF1-205ENST00000541110 NOP2P46087 812 aaKnown RBP11.68□□□□□ -0.54
TRERF1-205ENST00000541110 CCDC102AQ96A19 550 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 TMOD3Q9NYL9 352 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 CEP126Q9P2H0 1117 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 C6orf229H3BNL8 230 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 SPA17Q15506 151 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 TAF12Q16514 161 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 GIMAP7Q8NHV1 300 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 SPTY2D1Q68D10 685 aaPredicted RBP11.68□□□□□ -0.54
TRERF1-205ENST00000541110 ERLIN1O75477 346 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 CCDC192P0DO97 292 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 IFFO1Q0D2I5 559 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 IMMTQ16891 758 aaKnown RBP11.68□□□□□ -0.54
TRERF1-205ENST00000541110 CWC27Q6UX04 472 aaKnown RBP11.68□□□□□ -0.54
TRERF1-205ENST00000541110 RAB3IL1Q8TBN0 382 aa11.68□□□□□ -0.54
TRERF1-205ENST00000541110 UTP14AQ9BVJ6 771 aaKnown RBP11.68□□□□□ -0.54
TRERF1-205ENST00000541110 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
TRERF1-205ENST00000541110 PLS1Q14651 629 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 SYNCQ9H7C4 482 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 LARP1BQ659C4 914 aaKnown RBP11.67□□□□□ -0.54
TRERF1-205ENST00000541110 CCDC66A2RUB6 948 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 ZC3H6P61129 1189 aaKnown RBP11.67□□□□□ -0.54
TRERF1-205ENST00000541110 AEBP1Q8IUX7 1158 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 LRRC45Q96CN5 670 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms