RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 CLGNO14967 610 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 TERF2Q15554 542 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 AMOTL2Q9Y2J4 779 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 ALKQ9UM73 1620 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 PLEKHG1Q9ULL1 1385 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 MMP14P50281 582 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 TESK2Q96S53 571 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
CLDN2-202ENST00000540876 SLIT1O75093 1534 aa11.86□□□□□ -0.51
CLDN2-202ENST00000540876 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
CLDN2-202ENST00000540876 NUTM2FA1L443 756 aa11.86□□□□□ -0.51
CLDN2-202ENST00000540876 TSPYL1Q9H0U9 437 aa11.86□□□□□ -0.51
CLDN2-202ENST00000540876 TTC12Q9H892 705 aaPredicted RBP11.86□□□□□ -0.51
CLDN2-202ENST00000540876 KNSTRNQ9Y448 316 aa11.86□□□□□ -0.51
CLDN2-202ENST00000540876 LOC102724159A0A0B4J2E5 919 aa11.86□□□□□ -0.51
CLDN2-202ENST00000540876 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
CLDN2-202ENST00000540876 KCNA6P17658 529 aa11.86□□□□□ -0.51
CLDN2-202ENST00000540876 PSEN1P49768 467 aa11.86□□□□□ -0.51
CLDN2-202ENST00000540876 PWP2Q15269 919 aaKnown RBP11.86□□□□□ -0.51
CLDN2-202ENST00000540876 LRSAM1Q6UWE0 723 aa11.86□□□□□ -0.51
CLDN2-202ENST00000540876 GPRASP1Q5JY77 1395 aa11.86□□□□□ -0.51
CLDN2-202ENST00000540876 PER1O15534 1290 aaPredicted RBP11.85□□□□□ -0.51
CLDN2-202ENST00000540876 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
CLDN2-202ENST00000540876 RWDD1Q9H446 243 aaPredicted RBP11.85□□□□□ -0.51
CLDN2-202ENST00000540876 DIAPH3Q9NSV4 1193 aa11.85□□□□□ -0.51
CLDN2-202ENST00000540876 LMBRD1Q9NUN5 540 aa11.85□□□□□ -0.51
CLDN2-202ENST00000540876 BCCIPQ9P287 314 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLDN2-202ENST00000540876 ASXL1Q8IXJ9 1541 aa11.85□□□□□ -0.51
CLDN2-202ENST00000540876 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
CLDN2-202ENST00000540876 FKBP5Q13451 457 aaPredicted RBP11.84□□□□□ -0.51
CLDN2-202ENST00000540876 FEZ2Q9UHY8 353 aaPredicted RBP11.84□□□□□ -0.51
CLDN2-202ENST00000540876 ADGRB1O14514 1584 aa11.84□□□□□ -0.51
CLDN2-202ENST00000540876 PTPRUQ92729 1446 aa11.84□□□□□ -0.51
CLDN2-202ENST00000540876 YTHDC2Q9H6S0 1430 aaKnown RBP11.84□□□□□ -0.51
CLDN2-202ENST00000540876 K7ELQ4 463 aaPredicted RBP11.84□□□□□ -0.51
CLDN2-202ENST00000540876 GEMIN8Q9NWZ8 242 aaKnown RBP11.84□□□□□ -0.51
CLDN2-202ENST00000540876 NRXN3Q9Y4C0 1643 aa11.84□□□□□ -0.51
CLDN2-202ENST00000540876 INSRP06213 1382 aa11.83□□□□□ -0.51
CLDN2-202ENST00000540876 CCDC146Q8IYE0 955 aa11.83□□□□□ -0.51
CLDN2-202ENST00000540876 TBX22Q9Y458 520 aa11.83□□□□□ -0.51
CLDN2-202ENST00000540876 NPHP4O75161 1426 aaPredicted RBP11.83□□□□□ -0.52
CLDN2-202ENST00000540876 ZNF521Q96K83 1311 aa11.83□□□□□ -0.52
CLDN2-202ENST00000540876 IQGAP1P46940 1657 aa11.83□□□□□ -0.52
CLDN2-202ENST00000540876 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
CLDN2-202ENST00000540876 TMX1Q9H3N1 280 aa11.83□□□□□ -0.52
CLDN2-202ENST00000540876 CTNNA3Q9UI47 895 aa11.83□□□□□ -0.52
CLDN2-202ENST00000540876 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
CLDN2-202ENST00000540876 ROBO2Q9HCK4 1378 aa11.82□□□□□ -0.52
CLDN2-202ENST00000540876 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
CLDN2-202ENST00000540876 YY1AP1Q9H869 796 aa11.82□□□□□ -0.52
CLDN2-202ENST00000540876 TMEM63CQ9P1W3 806 aa11.82□□□□□ -0.52
CLDN2-202ENST00000540876 DDX41Q9UJV9 622 aaKnown RBP11.82□□□□□ -0.52
CLDN2-202ENST00000540876 NKTRP30414 1462 aaKnown RBP11.82□□□□□ -0.52
CLDN2-202ENST00000540876 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
CLDN2-202ENST00000540876 RSPH14Q9UHP6 348 aa11.82□□□□□ -0.52
CLDN2-202ENST00000540876 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
CLDN2-202ENST00000540876 EFCC1Q9HA90 598 aa11.81□□□□□ -0.52
CLDN2-202ENST00000540876 CABP2Q9NPB3 220 aa11.81□□□□□ -0.52
CLDN2-202ENST00000540876 PATL2C9JE40 543 aaKnown RBP11.8□□□□□ -0.52
CLDN2-202ENST00000540876 NCBP1Q09161 790 aaKnown RBP11.8□□□□□ -0.52
CLDN2-202ENST00000540876 EP400NLQ6ZTU2 488 aa11.8□□□□□ -0.52
CLDN2-202ENST00000540876 TNNQ9UQP3 1299 aa11.8□□□□□ -0.52
CLDN2-202ENST00000540876 ZNF335Q9H4Z2 1342 aaPredicted RBP11.8□□□□□ -0.52
CLDN2-202ENST00000540876 KDM5AP29375 1690 aaKnown RBP11.8□□□□□ -0.52
CLDN2-202ENST00000540876 GTF2A1P52655 376 aaPredicted RBP11.8□□□□□ -0.52
CLDN2-202ENST00000540876 FAM193AP78312 1265 aa11.8□□□□□ -0.52
CLDN2-202ENST00000540876 KRT222Q8N1A0 295 aa11.8□□□□□ -0.52
CLDN2-202ENST00000540876 SPTLC3Q9NUV7 552 aa11.8□□□□□ -0.52
CLDN2-202ENST00000540876 CTIFO43310 598 aaKnown RBP11.79□□□□□ -0.52
CLDN2-202ENST00000540876 TRMT2AQ8IZ69 625 aaKnown RBP11.79□□□□□ -0.52
CLDN2-202ENST00000540876 MORC2Q9Y6X9 1032 aaPredicted RBP11.79□□□□□ -0.52
CLDN2-202ENST00000540876 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
CLDN2-202ENST00000540876 HNRNPH2P55795 449 aaKnown RBP11.79□□□□□ -0.52
CLDN2-202ENST00000540876 TSPY26PQ9H489 355 aa11.79□□□□□ -0.52
CLDN2-202ENST00000540876 MED14O60244 1454 aa11.79□□□□□ -0.52
CLDN2-202ENST00000540876 APAF1O14727 1248 aa11.78□□□□□ -0.52
CLDN2-202ENST00000540876 AXDND1Q5T1B0 1012 aaPredicted RBP11.78□□□□□ -0.52
CLDN2-202ENST00000540876 NSFL1CQ9UNZ2 370 aaKnown RBP11.78□□□□□ -0.52
CLDN2-202ENST00000540876 AK9Q5TCS8 1911 aa11.78□□□□□ -0.52
CLDN2-202ENST00000540876 RLBP1P12271 317 aa11.78□□□□□ -0.52
CLDN2-202ENST00000540876 SRPK2P78362 688 aaKnown RBP11.78□□□□□ -0.52
CLDN2-202ENST00000540876 PKP1Q13835 747 aa11.78□□□□□ -0.52
CLDN2-202ENST00000540876 C14orf37Q86TY3 774 aa11.78□□□□□ -0.52
CLDN2-202ENST00000540876 CHAMP1Q96JM3 812 aa11.78□□□□□ -0.52
CLDN2-202ENST00000540876 USP25Q9UHP3 1055 aa11.78□□□□□ -0.52
CLDN2-202ENST00000540876 KIF16BQ96L93 1317 aa11.77□□□□□ -0.52
CLDN2-202ENST00000540876 NUCB2P80303 420 aa11.77□□□□□ -0.52
CLDN2-202ENST00000540876 RAD51AP2Q09MP3 1159 aa11.77□□□□□ -0.52
CLDN2-202ENST00000540876 KIF18AQ8NI77 898 aa11.77□□□□□ -0.52
CLDN2-202ENST00000540876 ZNF622Q969S3 477 aaKnown RBP eCLIP11.77□□□□□ -0.52
CLDN2-202ENST00000540876 ABCC11Q96J66 1382 aa11.77□□□□□ -0.53
CLDN2-202ENST00000540876 NAA30Q147X3 362 aaPredicted RBP11.77□□□□□ -0.53
CLDN2-202ENST00000540876 KIF2CQ99661 725 aa11.76□□□□□ -0.53
CLDN2-202ENST00000540876 BCL2L13Q9BXK5 485 aa11.76□□□□□ -0.53
CLDN2-202ENST00000540876 DMRT2Q9Y5R5 561 aa11.76□□□□□ -0.53
CLDN2-202ENST00000540876 PPP2R1AP30153 589 aa11.76□□□□□ -0.53
CLDN2-202ENST00000540876 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
CLDN2-202ENST00000540876 LMOD3Q0VAK6 560 aa11.76□□□□□ -0.53
CLDN2-202ENST00000540876 CDCA8Q53HL2 280 aa11.76□□□□□ -0.53
CLDN2-202ENST00000540876 PROSER2Q86WR7 435 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms