RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 FAM196AQ6ZSG2 479 aa20.7■□□□□ 0.9
DDB1-218ENST00000540784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.7■□□□□ 0.9
DDB1-218ENST00000540784 MEGF6O75095 1541 aa20.69■□□□□ 0.9
DDB1-218ENST00000540784 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
DDB1-218ENST00000540784 OVOS2A0A0G2JMS6 1433 aa20.69■□□□□ 0.9
DDB1-218ENST00000540784 AMOTQ4VCS5 1084 aa20.68■□□□□ 0.9
DDB1-218ENST00000540784 KDRP35968 1356 aa20.68■□□□□ 0.9
DDB1-218ENST00000540784 FCHSD2O94868 740 aa20.67■□□□□ 0.9
DDB1-218ENST00000540784 PARP4Q9UKK3 1724 aaKnown RBP20.67■□□□□ 0.9
DDB1-218ENST00000540784 BRWD3Q6RI45 1802 aa20.67■□□□□ 0.9
DDB1-218ENST00000540784 TNS2Q63HR2 1409 aa20.66■□□□□ 0.9
DDB1-218ENST00000540784 PCDH11XQ9BZA7 1347 aa20.65■□□□□ 0.9
DDB1-218ENST00000540784 PCDH11YQ9BZA8 1340 aa20.65■□□□□ 0.9
DDB1-218ENST00000540784 PNNQ9H307 717 aaKnown RBP20.65■□□□□ 0.9
DDB1-218ENST00000540784 WDR43Q15061 677 aaKnown RBP eCLIP20.64■□□□□ 0.89
DDB1-218ENST00000540784 RSPH6AQ9H0K4 717 aa20.64■□□□□ 0.89
DDB1-218ENST00000540784 RGPD1P0DJD0 1748 aa20.64■□□□□ 0.89
DDB1-218ENST00000540784 PLEKHG2Q9H7P9 1386 aa20.63■□□□□ 0.89
DDB1-218ENST00000540784 CYP27B1O15528 508 aa20.63■□□□□ 0.89
DDB1-218ENST00000540784 PRKAR2BP31323 418 aa20.63■□□□□ 0.89
DDB1-218ENST00000540784 IFNL2Q8IZJ0 200 aa20.63■□□□□ 0.89
DDB1-218ENST00000540784 LRRC37A3O60309 1634 aa20.63■□□□□ 0.89
DDB1-218ENST00000540784 WNK3Q9BYP7 1800 aa20.62■□□□□ 0.89
DDB1-218ENST00000540784 CCDC184Q52MB2 194 aa20.62■□□□□ 0.89
DDB1-218ENST00000540784 CCDC125Q86Z20 511 aa20.62■□□□□ 0.89
DDB1-218ENST00000540784 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
DDB1-218ENST00000540784 SOCS7O14512 581 aa20.61■□□□□ 0.89
DDB1-218ENST00000540784 NEFMP07197 916 aa20.61■□□□□ 0.89
DDB1-218ENST00000540784 ZNF530Q6P9A1 599 aaPredicted RBP20.61■□□□□ 0.89
DDB1-218ENST00000540784 UPF1Q92900 1129 aaKnown RBP eCLIP20.61■□□□□ 0.89
DDB1-218ENST00000540784 TRIM37O94972 964 aa20.6■□□□□ 0.89
DDB1-218ENST00000540784 PHKG2P15735 406 aa20.6■□□□□ 0.89
DDB1-218ENST00000540784 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
DDB1-218ENST00000540784 C1orf141Q5JVX7 400 aa20.6■□□□□ 0.89
DDB1-218ENST00000540784 SF3B2Q13435 895 aaKnown RBP20.59■□□□□ 0.89
DDB1-218ENST00000540784 NKX1-1Q15270 411 aaPredicted RBP20.59■□□□□ 0.89
DDB1-218ENST00000540784 PHACTR3Q96KR7 559 aa20.59■□□□□ 0.89
DDB1-218ENST00000540784 ADAMTS8Q9UP79 889 aa20.59■□□□□ 0.89
DDB1-218ENST00000540784 HSP90AB1P08238 724 aaKnown RBP20.58■□□□□ 0.89
DDB1-218ENST00000540784 ACSBG1Q96GR2 724 aa20.58■□□□□ 0.89
DDB1-218ENST00000540784 BCL9O00512 1426 aa20.58■□□□□ 0.88
DDB1-218ENST00000540784 AKAP4Q5JQC9 854 aa20.57■□□□□ 0.88
DDB1-218ENST00000540784 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
DDB1-218ENST00000540784 BCL11BQ9C0K0 894 aaPredicted RBP20.57■□□□□ 0.88
DDB1-218ENST00000540784 PRIM1P49642 420 aaKnown RBP20.56■□□□□ 0.88
DDB1-218ENST00000540784 PNISRQ8TF01 805 aaKnown RBP20.56■□□□□ 0.88
DDB1-218ENST00000540784 PLEKHF1Q96S99 279 aa20.56■□□□□ 0.88
DDB1-218ENST00000540784 KCNQ2O43526 872 aa20.55■□□□□ 0.88
DDB1-218ENST00000540784 SYTL4Q96C24 671 aaPredicted RBP20.55■□□□□ 0.88
DDB1-218ENST00000540784 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
DDB1-218ENST00000540784 MAPK8IP3Q9UPT6 1336 aa20.53■□□□□ 0.88
DDB1-218ENST00000540784 APBA3O96018 575 aa20.53■□□□□ 0.88
DDB1-218ENST00000540784 MPRIPQ6WCQ1 1025 aa20.53■□□□□ 0.88
DDB1-218ENST00000540784 PTF1AQ7RTS3 328 aa20.52■□□□□ 0.88
DDB1-218ENST00000540784 MIER1Q8N108 512 aa20.52■□□□□ 0.88
DDB1-218ENST00000540784 RUNDC1Q96C34 613 aa20.52■□□□□ 0.88
DDB1-218ENST00000540784 PKD1L3Q7Z443 1732 aa20.52■□□□□ 0.88
DDB1-218ENST00000540784 GNAT3A8MTJ3 354 aa20.51■□□□□ 0.87
DDB1-218ENST00000540784 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
DDB1-218ENST00000540784 CCER2I3L3R5 266 aa20.51■□□□□ 0.87
DDB1-218ENST00000540784 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
DDB1-218ENST00000540784 BAG6P46379 1132 aa20.49■□□□□ 0.87
DDB1-218ENST00000540784 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
DDB1-218ENST00000540784 SHANK3Q9BYB0 1731 aa20.49■□□□□ 0.87
DDB1-218ENST00000540784 RNMTO43148 476 aaKnown RBP20.48■□□□□ 0.87
DDB1-218ENST00000540784 CABP4P57796 275 aa20.48■□□□□ 0.87
DDB1-218ENST00000540784 NFE2L2Q16236 605 aa20.48■□□□□ 0.87
DDB1-218ENST00000540784 RTF1Q92541 710 aaKnown RBP20.48■□□□□ 0.87
DDB1-218ENST00000540784 TMOD3Q9NYL9 352 aa20.48■□□□□ 0.87
DDB1-218ENST00000540784 DEFB132Q7Z7B7 95 aa20.47■□□□□ 0.87
DDB1-218ENST00000540784 FAM9BQ8IZU0 186 aa20.47■□□□□ 0.87
DDB1-218ENST00000540784 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
DDB1-218ENST00000540784 EP400Q96L91 3159 aa20.46■□□□□ 0.87
DDB1-218ENST00000540784 HTATSF1O43719 755 aaKnown RBP20.46■□□□□ 0.87
DDB1-218ENST00000540784 IL17REQ8NFR9 667 aa20.46■□□□□ 0.87
DDB1-218ENST00000540784 PIGBQ92521 554 aa20.46■□□□□ 0.87
DDB1-218ENST00000540784 PLSCR1O15162 318 aa20.45■□□□□ 0.86
DDB1-218ENST00000540784 TMPOP42166 694 aaKnown RBP20.45■□□□□ 0.86
DDB1-218ENST00000540784 RIPK4P57078 832 aa20.45■□□□□ 0.86
DDB1-218ENST00000540784 EN1Q05925 392 aaPredicted RBP20.45■□□□□ 0.86
DDB1-218ENST00000540784 NFATC2IPQ8NCF5 419 aa20.45■□□□□ 0.86
DDB1-218ENST00000540784 KAT6BQ8WYB5 2073 aa20.44■□□□□ 0.86
DDB1-218ENST00000540784 NEUROD2Q15784 382 aa20.43■□□□□ 0.86
DDB1-218ENST00000540784 KDM6AO15550 1401 aaPredicted RBP20.43■□□□□ 0.86
DDB1-218ENST00000540784 SBF2Q86WG5 1849 aa20.42■□□□□ 0.86
DDB1-218ENST00000540784 APAF1O14727 1248 aa20.42■□□□□ 0.86
DDB1-218ENST00000540784 MCM10Q7L590 875 aa20.42■□□□□ 0.86
DDB1-218ENST00000540784 CAMKK2Q96RR4 588 aa20.42■□□□□ 0.86
DDB1-218ENST00000540784 SLC52A2Q9HAB3 445 aa20.42■□□□□ 0.86
DDB1-218ENST00000540784 RRP7AQ9Y3A4 280 aaKnown RBP20.42■□□□□ 0.86
DDB1-218ENST00000540784 TEFQ10587 303 aa20.41■□□□□ 0.86
DDB1-218ENST00000540784 DCTN1Q14203 1278 aa20.41■□□□□ 0.86
DDB1-218ENST00000540784 EZH2Q15910 746 aaKnown RBP20.41■□□□□ 0.86
DDB1-218ENST00000540784 SMARCC1Q92922 1105 aaPredicted RBP20.41■□□□□ 0.86
DDB1-218ENST00000540784 LMOD3Q0VAK6 560 aa20.4■□□□□ 0.86
DDB1-218ENST00000540784 NHSQ6T4R5 1651 aa20.39■□□□□ 0.86
DDB1-218ENST00000540784 ATG3Q9NT62 314 aa20.39■□□□□ 0.85
DDB1-218ENST00000540784 ASAP1Q9ULH1 1129 aa20.39■□□□□ 0.85
DDB1-218ENST00000540784 DOT1LQ8TEK3 1739 aa20.38■□□□□ 0.85
DDB1-218ENST00000540784 TXNRD1Q16881 649 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms