RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 MEX3CQ5U5Q3 659 aaKnown RBP6.53□□□□□ -1.36
TSG101-205ENST00000540555 THAP11Q96EK4 314 aa6.53□□□□□ -1.36
TSG101-205ENST00000540555 PCMTD1Q96MG8 357 aaPredicted RBP6.53□□□□□ -1.36
TSG101-205ENST00000540555 MTRQ99707 1265 aa6.53□□□□□ -1.36
TSG101-205ENST00000540555 SLAIN2Q9P270 581 aa6.53□□□□□ -1.36
TSG101-205ENST00000540555 SCAF11Q99590 1463 aaKnown RBP6.53□□□□□ -1.36
TSG101-205ENST00000540555 XIRP1Q702N8 1843 aaKnown RBP6.53□□□□□ -1.36
TSG101-205ENST00000540555 CLIP1P30622 1438 aa6.52□□□□□ -1.37
TSG101-205ENST00000540555 ABCC3O15438 1527 aa6.52□□□□□ -1.37
TSG101-205ENST00000540555 KCNA6P17658 529 aa6.52□□□□□ -1.37
TSG101-205ENST00000540555 HRCP23327 699 aa6.52□□□□□ -1.37
TSG101-205ENST00000540555 PRPF38BQ5VTL8 546 aaKnown RBP6.52□□□□□ -1.37
TSG101-205ENST00000540555 BRICD5Q6PL45 260 aa6.52□□□□□ -1.37
TSG101-205ENST00000540555 ZNF516Q92618 1163 aa6.52□□□□□ -1.37
TSG101-205ENST00000540555 SYMPKQ92797 1274 aaKnown RBP6.52□□□□□ -1.37
TSG101-205ENST00000540555 SALL2Q9Y467 1007 aaPredicted RBP6.52□□□□□ -1.37
TSG101-205ENST00000540555 AFF2P51816 1311 aa6.51□□□□□ -1.37
TSG101-205ENST00000540555 SLIT1O75093 1534 aa6.51□□□□□ -1.37
TSG101-205ENST00000540555 PRDM15P57071 1507 aaPredicted RBP6.51□□□□□ -1.37
TSG101-205ENST00000540555 ZPR1O75312 459 aa6.51□□□□□ -1.37
TSG101-205ENST00000540555 NR1I2O75469 434 aa6.51□□□□□ -1.37
TSG101-205ENST00000540555 CSPP1Q1MSJ5 1256 aa6.51□□□□□ -1.37
TSG101-205ENST00000540555 RTL5Q5HYW3 569 aaPredicted RBP6.51□□□□□ -1.37
TSG101-205ENST00000540555 PPP2R2DQ66LE6 453 aa6.51□□□□□ -1.37
TSG101-205ENST00000540555 RNF19BQ6ZMZ0 732 aa6.51□□□□□ -1.37
TSG101-205ENST00000540555 CABLES1Q8TDN4 633 aa6.51□□□□□ -1.37
TSG101-205ENST00000540555 NWD1Q149M9 1564 aa6.51□□□□□ -1.37
TSG101-205ENST00000540555 INO80Q9ULG1 1556 aaPredicted RBP6.51□□□□□ -1.37
TSG101-205ENST00000540555 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
TSG101-205ENST00000540555 PREX2Q70Z35 1606 aa6.5□□□□□ -1.37
TSG101-205ENST00000540555 DHX29Q7Z478 1369 aaKnown RBP6.5□□□□□ -1.37
TSG101-205ENST00000540555 NUTM2BA6NNL0 878 aaPredicted RBP6.5□□□□□ -1.37
TSG101-205ENST00000540555 NUTM2EB1AL46 878 aaPredicted RBP6.5□□□□□ -1.37
TSG101-205ENST00000540555 LTKP29376 864 aa6.5□□□□□ -1.37
TSG101-205ENST00000540555 KCNC4Q03721 635 aa6.5□□□□□ -1.37
TSG101-205ENST00000540555 NUTM2DQ5VT03 806 aaPredicted RBP6.5□□□□□ -1.37
TSG101-205ENST00000540555 NUTM2AQ8IVF1 878 aaPredicted RBP6.5□□□□□ -1.37
TSG101-205ENST00000540555 IL21Q9HBE4 155 aa6.5□□□□□ -1.37
TSG101-205ENST00000540555 CDC42BPBQ9Y5S2 1711 aa6.5□□□□□ -1.37
TSG101-205ENST00000540555 AHDC1Q5TGY3 1603 aaPredicted RBP6.5□□□□□ -1.37
TSG101-205ENST00000540555 NKTRP30414 1462 aaKnown RBP6.49□□□□□ -1.37
TSG101-205ENST00000540555 NCOA2Q15596 1464 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 LCE2BO14633 110 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 YY1P25490 414 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 MTMR2Q13614 643 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 Q3C1V9 767 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 NGLY1Q96IV0 654 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 ZBTB3Q9H5J0 574 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 QTRT2Q9H974 415 aaKnown RBP6.49□□□□□ -1.37
TSG101-205ENST00000540555 PHLPP1O60346 1717 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 RTEL1-TNFRSF6BF6WH68 1400 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 NCOA3Q9Y6Q9 1424 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 SHPRHQ149N8 1683 aa6.49□□□□□ -1.37
TSG101-205ENST00000540555 TIAM1Q13009 1591 aa6.48□□□□□ -1.37
TSG101-205ENST00000540555 DIP2AQ14689 1571 aa6.48□□□□□ -1.37
TSG101-205ENST00000540555 BCL9LQ86UU0 1499 aa6.48□□□□□ -1.37
TSG101-205ENST00000540555 MSH6P52701 1360 aa6.48□□□□□ -1.37
TSG101-205ENST00000540555 UTRNP46939 3433 aa6.48□□□□□ -1.37
TSG101-205ENST00000540555 C6orf229H3BNL8 230 aa6.48□□□□□ -1.37
TSG101-205ENST00000540555 TLL1O43897 1013 aa6.48□□□□□ -1.37
TSG101-205ENST00000540555 FMNL1O95466 1100 aaPredicted RBP6.48□□□□□ -1.37
TSG101-205ENST00000540555 RFC5P40937 340 aa6.48□□□□□ -1.37
TSG101-205ENST00000540555 FAM160A2Q8N612 972 aaPredicted RBP6.48□□□□□ -1.37
TSG101-205ENST00000540555 NKX2-3Q8TAU0 364 aa6.48□□□□□ -1.37
TSG101-205ENST00000540555 CAMSAP2Q08AD1 1489 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 PLEKHH2Q8IVE3 1493 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 SYCP2Q9BX26 1530 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 SPDYE5A6NIY4 337 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 CFAP99D6REC4 459 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 TXNDC2Q86VQ3 553 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 RETREG3Q86VR2 466 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 SPSB2Q99619 263 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 USB1Q9BQ65 265 aaKnown RBP6.47□□□□□ -1.37
TSG101-205ENST00000540555 ATP1B4Q9UN42 357 aaPredicted RBP6.47□□□□□ -1.37
TSG101-205ENST00000540555 FMN1Q68DA7 1419 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 SETD5Q9C0A6 1442 aa6.47□□□□□ -1.37
TSG101-205ENST00000540555 ADH1BP00325 375 aa6.46□□□□□ -1.38
TSG101-205ENST00000540555 HNRNPMP52272 730 aaKnown RBP eCLIP6.46□□□□□ -1.38
TSG101-205ENST00000540555 BLMP54132 1417 aaPredicted RBP6.46□□□□□ -1.38
TSG101-205ENST00000540555 TRAF7Q6Q0C0 670 aa6.46□□□□□ -1.38
TSG101-205ENST00000540555 PROSER2Q86WR7 435 aaPredicted RBP6.46□□□□□ -1.38
TSG101-205ENST00000540555 GTF3C3Q9Y5Q9 886 aa6.46□□□□□ -1.38
TSG101-205ENST00000540555 WASHC2CQ9Y4E1 1318 aa6.46□□□□□ -1.38
TSG101-205ENST00000540555 PRR7Q8TB68 274 aa6.45□□□□□ -1.38
TSG101-205ENST00000540555 ERVK-7P63135 1459 aa6.45□□□□□ -1.38
TSG101-205ENST00000540555 TET3O43151 1660 aa6.45□□□□□ -1.38
TSG101-205ENST00000540555 GPATCH8Q9UKJ3 1502 aaKnown RBP6.45□□□□□ -1.38
TSG101-205ENST00000540555 TMEM2Q9UHN6 1383 aa6.44□□□□□ -1.38
TSG101-205ENST00000540555 MSS51Q4VC12 460 aa6.44□□□□□ -1.38
TSG101-205ENST00000540555 PRDM9Q9NQV7 894 aa6.44□□□□□ -1.38
TSG101-205ENST00000540555 MBD5Q9P267 1494 aa6.43□□□□□ -1.38
TSG101-205ENST00000540555 KIF3BO15066 747 aa6.43□□□□□ -1.38
TSG101-205ENST00000540555 MMP16P51512 607 aa6.43□□□□□ -1.38
TSG101-205ENST00000540555 CTDSPL2Q05D32 466 aa6.43□□□□□ -1.38
TSG101-205ENST00000540555 DESI1Q6ICB0 168 aa6.43□□□□□ -1.38
TSG101-205ENST00000540555 FNBP4Q8N3X1 1017 aaPredicted RBP6.43□□□□□ -1.38
TSG101-205ENST00000540555 EID1Q9Y6B2 187 aa6.43□□□□□ -1.38
TSG101-205ENST00000540555 ADGBQ8N7X0 1667 aa6.42□□□□□ -1.38
TSG101-205ENST00000540555 ATRNO75882 1429 aa6.42□□□□□ -1.38
TSG101-205ENST00000540555 PER1O15534 1290 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms