RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 DCCP43146 1447 aa18.93■□□□□ 0.62
TSFM-207ENST00000540550 CHL1O00533 1208 aa18.92■□□□□ 0.62
TSFM-207ENST00000540550 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
TSFM-207ENST00000540550 KRT28Q7Z3Y7 464 aa18.92■□□□□ 0.62
TSFM-207ENST00000540550 TMEM57Q8N5G2 664 aa18.92■□□□□ 0.62
TSFM-207ENST00000540550 CRB1P82279 1406 aa18.92■□□□□ 0.62
TSFM-207ENST00000540550 ARHGAP45Q92619 1136 aa18.92■□□□□ 0.62
TSFM-207ENST00000540550 HTATSF1O43719 755 aaKnown RBP18.91■□□□□ 0.62
TSFM-207ENST00000540550 ANP32AP39687 249 aaKnown RBP18.91■□□□□ 0.62
TSFM-207ENST00000540550 RGS3P49796 1198 aa18.91■□□□□ 0.62
TSFM-207ENST00000540550 LRRC37A3O60309 1634 aa18.91■□□□□ 0.62
TSFM-207ENST00000540550 MST1RQ04912 1400 aa18.9■□□□□ 0.62
TSFM-207ENST00000540550 KIAA0232Q92628 1395 aa18.9■□□□□ 0.62
TSFM-207ENST00000540550 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.61
TSFM-207ENST00000540550 ALS2Q96Q42 1657 aa18.89■□□□□ 0.61
TSFM-207ENST00000540550 GNAT3A8MTJ3 354 aa18.88■□□□□ 0.61
TSFM-207ENST00000540550 GCP02774 474 aa18.88■□□□□ 0.61
TSFM-207ENST00000540550 CHMP4BQ9H444 224 aaKnown RBP18.88■□□□□ 0.61
TSFM-207ENST00000540550 USP19O94966 1318 aa18.88■□□□□ 0.61
TSFM-207ENST00000540550 MAP3K5Q99683 1374 aa18.87■□□□□ 0.61
TSFM-207ENST00000540550 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
TSFM-207ENST00000540550 API5Q9BZZ5 524 aaKnown RBP18.87■□□□□ 0.61
TSFM-207ENST00000540550 PLEKHG5O94827 1062 aa18.86■□□□□ 0.61
TSFM-207ENST00000540550 TSPYL4Q9UJ04 414 aa18.86■□□□□ 0.61
TSFM-207ENST00000540550 CADPS2Q86UW7 1296 aa18.86■□□□□ 0.61
TSFM-207ENST00000540550 MSH6P52701 1360 aa18.85■□□□□ 0.61
TSFM-207ENST00000540550 STRCQ7RTU9 1775 aa18.85■□□□□ 0.61
TSFM-207ENST00000540550 FAM161AQ3B820 660 aa18.85■□□□□ 0.61
TSFM-207ENST00000540550 ARHGEF25Q86VW2 580 aa18.85■□□□□ 0.61
TSFM-207ENST00000540550 VIRMAQ69YN4 1812 aaKnown RBP18.85■□□□□ 0.61
TSFM-207ENST00000540550 ABCC4O15439 1325 aa18.85■□□□□ 0.61
TSFM-207ENST00000540550 ZBTB40Q9NUA8 1239 aa18.84■□□□□ 0.61
TSFM-207ENST00000540550 XIRP1Q702N8 1843 aaKnown RBP18.84■□□□□ 0.61
TSFM-207ENST00000540550 HDAC1Q13547 482 aaPredicted RBP18.84■□□□□ 0.61
TSFM-207ENST00000540550 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
TSFM-207ENST00000540550 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
TSFM-207ENST00000540550 KRT24Q2M2I5 525 aa18.83■□□□□ 0.6
TSFM-207ENST00000540550 MIS18AQ9NYP9 233 aa18.82■□□□□ 0.6
TSFM-207ENST00000540550 MSH5O43196 834 aa18.82■□□□□ 0.6
TSFM-207ENST00000540550 NPM2Q86SE8 214 aaKnown RBP18.82■□□□□ 0.6
TSFM-207ENST00000540550 PDZRN3Q9UPQ7 1066 aa18.82■□□□□ 0.6
TSFM-207ENST00000540550 RGPD5Q99666 1765 aa18.81■□□□□ 0.6
TSFM-207ENST00000540550 ERICH6Q7L0X2 663 aa18.81■□□□□ 0.6
TSFM-207ENST00000540550 NPHP3Q7Z494 1330 aa18.81■□□□□ 0.6
TSFM-207ENST00000540550 LMO7Q8WWI1 1683 aa18.8■□□□□ 0.6
TSFM-207ENST00000540550 CAMTA1Q9Y6Y1 1673 aa18.8■□□□□ 0.6
TSFM-207ENST00000540550 MED1Q15648 1581 aaPredicted RBP18.8■□□□□ 0.6
TSFM-207ENST00000540550 ANKRD24Q8TF21 1146 aa18.8■□□□□ 0.6
TSFM-207ENST00000540550 LRRC59Q96AG4 307 aaKnown RBP18.8■□□□□ 0.6
TSFM-207ENST00000540550 BABAM1Q9NWV8 329 aa18.79■□□□□ 0.6
TSFM-207ENST00000540550 C8orf34Q49A92 452 aa18.78■□□□□ 0.6
TSFM-207ENST00000540550 PTPRCP08575 1304 aa18.78■□□□□ 0.6
TSFM-207ENST00000540550 ZBTB7BO15156 539 aaPredicted RBP18.78■□□□□ 0.6
TSFM-207ENST00000540550 PLEKHO1Q53GL0 409 aaPredicted RBP18.78■□□□□ 0.6
TSFM-207ENST00000540550 IL17REQ8NFR9 667 aa18.78■□□□□ 0.6
TSFM-207ENST00000540550 IPO9Q96P70 1041 aaKnown RBP18.78■□□□□ 0.6
TSFM-207ENST00000540550 NCAPD2Q15021 1401 aa18.77■□□□□ 0.6
TSFM-207ENST00000540550 TNS3Q68CZ2 1445 aa18.77■□□□□ 0.6
TSFM-207ENST00000540550 TAF7Q15545 349 aaPredicted RBP18.77■□□□□ 0.6
TSFM-207ENST00000540550 FAM208AQ9UK61 1670 aaKnown RBP18.77■□□□□ 0.6
TSFM-207ENST00000540550 CACNA1FO60840 1977 aa18.76■□□□□ 0.59
TSFM-207ENST00000540550 AMOTQ4VCS5 1084 aa18.76■□□□□ 0.59
TSFM-207ENST00000540550 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
TSFM-207ENST00000540550 SOS1Q07889 1333 aaPredicted RBP18.76■□□□□ 0.59
TSFM-207ENST00000540550 ZC3H6P61129 1189 aaKnown RBP18.75■□□□□ 0.59
TSFM-207ENST00000540550 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
TSFM-207ENST00000540550 PXDNQ92626 1479 aa18.74■□□□□ 0.59
TSFM-207ENST00000540550 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
TSFM-207ENST00000540550 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
TSFM-207ENST00000540550 STK31Q9BXU1 1019 aa18.74■□□□□ 0.59
TSFM-207ENST00000540550 RGS12O14924 1447 aa18.74■□□□□ 0.59
TSFM-207ENST00000540550 CEMIPQ8WUJ3 1361 aa18.74■□□□□ 0.59
TSFM-207ENST00000540550 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
TSFM-207ENST00000540550 INTS3Q68E01 1043 aaKnown RBP18.74■□□□□ 0.59
TSFM-207ENST00000540550 SMC5Q8IY18 1101 aa18.74■□□□□ 0.59
TSFM-207ENST00000540550 KDM3BQ7LBC6 1761 aa18.73■□□□□ 0.59
TSFM-207ENST00000540550 CRYBG1Q9Y4K1 1723 aa18.73■□□□□ 0.59
TSFM-207ENST00000540550 C1orf141Q5JVX7 400 aa18.72■□□□□ 0.59
TSFM-207ENST00000540550 CCDC30Q5VVM6 783 aa18.72■□□□□ 0.59
TSFM-207ENST00000540550 AXIN2Q9Y2T1 843 aa18.72■□□□□ 0.59
TSFM-207ENST00000540550 NOP58Q9Y2X3 529 aaKnown RBP18.72■□□□□ 0.59
TSFM-207ENST00000540550 C1orf115Q9H7X2 142 aa18.72■□□□□ 0.59
TSFM-207ENST00000540550 ABCC6O95255 1503 aa18.72■□□□□ 0.59
TSFM-207ENST00000540550 ERBB3P21860 1342 aa18.71■□□□□ 0.59
TSFM-207ENST00000540550 COL18A1P39060 1754 aa18.71■□□□□ 0.59
TSFM-207ENST00000540550 SPATA31A3Q5VYP0 1347 aa18.71■□□□□ 0.59
TSFM-207ENST00000540550 TEFQ10587 303 aa18.7■□□□□ 0.58
TSFM-207ENST00000540550 ZBTB47Q9UFB7 747 aaPredicted RBP18.7■□□□□ 0.58
TSFM-207ENST00000540550 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
TSFM-207ENST00000540550 GCC1Q96CN9 775 aa18.69■□□□□ 0.58
TSFM-207ENST00000540550 ANP32EQ9BTT0 268 aa18.69■□□□□ 0.58
TSFM-207ENST00000540550 BRINP3Q76B58 766 aa18.68■□□□□ 0.58
TSFM-207ENST00000540550 DDRGK1Q96HY6 314 aa18.68■□□□□ 0.58
TSFM-207ENST00000540550 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
TSFM-207ENST00000540550 NUCB1Q02818 461 aa18.67■□□□□ 0.58
TSFM-207ENST00000540550 CABLES1Q8TDN4 633 aa18.67■□□□□ 0.58
TSFM-207ENST00000540550 NLRP2Q9NX02 1062 aa18.67■□□□□ 0.58
TSFM-207ENST00000540550 CCT4P50991 539 aaKnown RBP18.66■□□□□ 0.58
TSFM-207ENST00000540550 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
TSFM-207ENST00000540550 G2E3Q7L622 706 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms