RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 TNS2Q63HR2 1409 aa12.86□□□□□ -0.35
TRAPPC1-202ENST00000540486 NHSQ6T4R5 1651 aa12.85□□□□□ -0.35
TRAPPC1-202ENST00000540486 ARHGEF25Q86VW2 580 aa12.84□□□□□ -0.35
TRAPPC1-202ENST00000540486 WWC3Q9ULE0 1092 aa12.84□□□□□ -0.35
TRAPPC1-202ENST00000540486 QSER1Q2KHR3 1735 aa12.84□□□□□ -0.35
TRAPPC1-202ENST00000540486 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
TRAPPC1-202ENST00000540486 RBM46Q8TBY0 533 aaKnown RBP12.82□□□□□ -0.36
TRAPPC1-202ENST00000540486 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
TRAPPC1-202ENST00000540486 WNK3Q9BYP7 1800 aa12.82□□□□□ -0.36
TRAPPC1-202ENST00000540486 SLIT3O75094 1523 aa12.82□□□□□ -0.36
TRAPPC1-202ENST00000540486 PPIP5K1Q6PFW1 1433 aa12.81□□□□□ -0.36
TRAPPC1-202ENST00000540486 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC1-202ENST00000540486 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
TRAPPC1-202ENST00000540486 COL18A1P39060 1754 aa12.81□□□□□ -0.36
TRAPPC1-202ENST00000540486 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
TRAPPC1-202ENST00000540486 HMGB2P26583 209 aaKnown RBP12.8□□□□□ -0.36
TRAPPC1-202ENST00000540486 FSTL1Q12841 308 aa12.8□□□□□ -0.36
TRAPPC1-202ENST00000540486 ABCC6O95255 1503 aa12.79□□□□□ -0.36
TRAPPC1-202ENST00000540486 IL2RBP14784 551 aa12.79□□□□□ -0.36
TRAPPC1-202ENST00000540486 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
TRAPPC1-202ENST00000540486 BTAF1O14981 1849 aa12.78□□□□□ -0.36
TRAPPC1-202ENST00000540486 PCNTO95613 3336 aa12.78□□□□□ -0.36
TRAPPC1-202ENST00000540486 CHRDL2Q6WN34 429 aa12.78□□□□□ -0.36
TRAPPC1-202ENST00000540486 FLAD1Q8NFF5 587 aa12.78□□□□□ -0.36
TRAPPC1-202ENST00000540486 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
TRAPPC1-202ENST00000540486 TRPM1Q7Z4N2 1603 aa12.77□□□□□ -0.36
TRAPPC1-202ENST00000540486 WDR90Q96KV7 1748 aa12.77□□□□□ -0.36
TRAPPC1-202ENST00000540486 KCNQ4P56696 695 aa12.77□□□□□ -0.37
TRAPPC1-202ENST00000540486 HTRA3P83110 453 aa12.77□□□□□ -0.37
TRAPPC1-202ENST00000540486 MSL1Q68DK7 614 aa12.77□□□□□ -0.37
TRAPPC1-202ENST00000540486 C16orf71Q8IYS4 520 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC1-202ENST00000540486 IGSF1Q8N6C5 1336 aa12.77□□□□□ -0.37
TRAPPC1-202ENST00000540486 SRPK2P78362 688 aaKnown RBP12.76□□□□□ -0.37
TRAPPC1-202ENST00000540486 KDM2AQ9Y2K7 1162 aa12.76□□□□□ -0.37
TRAPPC1-202ENST00000540486 DCAF11Q8TEB1 546 aa12.75□□□□□ -0.37
TRAPPC1-202ENST00000540486 PCGF6Q9BYE7 350 aa12.75□□□□□ -0.37
TRAPPC1-202ENST00000540486 NMRK2Q9NPI5 230 aa12.75□□□□□ -0.37
TRAPPC1-202ENST00000540486 NLRP2Q9NX02 1062 aa12.75□□□□□ -0.37
TRAPPC1-202ENST00000540486 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC1-202ENST00000540486 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
TRAPPC1-202ENST00000540486 HSPA1AP0DMV8 641 aaKnown RBP12.74□□□□□ -0.37
TRAPPC1-202ENST00000540486 HSPA1BP0DMV9 641 aaKnown RBP12.74□□□□□ -0.37
TRAPPC1-202ENST00000540486 CABP1Q9NZU7 370 aa12.74□□□□□ -0.37
TRAPPC1-202ENST00000540486 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
TRAPPC1-202ENST00000540486 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
TRAPPC1-202ENST00000540486 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC1-202ENST00000540486 SIN3AQ96ST3 1273 aa12.72□□□□□ -0.37
TRAPPC1-202ENST00000540486 ERBB3P21860 1342 aa12.71□□□□□ -0.37
TRAPPC1-202ENST00000540486 SOX12O15370 315 aa12.71□□□□□ -0.37
TRAPPC1-202ENST00000540486 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
TRAPPC1-202ENST00000540486 CABP2Q9NPB3 220 aa12.71□□□□□ -0.37
TRAPPC1-202ENST00000540486 TUBGCP6Q96RT7 1819 aa12.71□□□□□ -0.38
TRAPPC1-202ENST00000540486 ANKRD36BQ8N2N9 1353 aa12.7□□□□□ -0.38
TRAPPC1-202ENST00000540486 TTC21BQ7Z4L5 1316 aa12.69□□□□□ -0.38
TRAPPC1-202ENST00000540486 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC1-202ENST00000540486 TTC21AQ8NDW8 1320 aa12.68□□□□□ -0.38
TRAPPC1-202ENST00000540486 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAPPC1-202ENST00000540486 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
TRAPPC1-202ENST00000540486 RGPD5Q99666 1765 aa12.68□□□□□ -0.38
TRAPPC1-202ENST00000540486 USP47Q96K76 1375 aa12.68□□□□□ -0.38
TRAPPC1-202ENST00000540486 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
TRAPPC1-202ENST00000540486 C10orf71Q711Q0 1435 aa12.66□□□□□ -0.38
TRAPPC1-202ENST00000540486 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
TRAPPC1-202ENST00000540486 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
TRAPPC1-202ENST00000540486 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
TRAPPC1-202ENST00000540486 PIK3C2AO00443 1686 aa12.66□□□□□ -0.38
TRAPPC1-202ENST00000540486 NSD2O96028 1365 aa12.66□□□□□ -0.38
TRAPPC1-202ENST00000540486 PLEKHG2Q9H7P9 1386 aa12.66□□□□□ -0.38
TRAPPC1-202ENST00000540486 LY75O60449 1722 aa12.65□□□□□ -0.38
TRAPPC1-202ENST00000540486 TGFB2P61812 414 aa12.65□□□□□ -0.38
TRAPPC1-202ENST00000540486 BCS1LQ9Y276 419 aa12.65□□□□□ -0.38
TRAPPC1-202ENST00000540486 NFAT5O94916 1531 aa12.64□□□□□ -0.39
TRAPPC1-202ENST00000540486 L3MBTL2Q969R5 705 aa12.64□□□□□ -0.39
TRAPPC1-202ENST00000540486 CENPJQ9HC77 1338 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC1-202ENST00000540486 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
TRAPPC1-202ENST00000540486 RRAGCQ9HB90 399 aa12.63□□□□□ -0.39
TRAPPC1-202ENST00000540486 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
TRAPPC1-202ENST00000540486 AK7Q96M32 723 aa12.62□□□□□ -0.39
TRAPPC1-202ENST00000540486 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
TRAPPC1-202ENST00000540486 VASPP50552 380 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC1-202ENST00000540486 ZCRB1Q8TBF4 217 aaKnown RBP12.61□□□□□ -0.39
TRAPPC1-202ENST00000540486 SSFA2P28290 1259 aa12.6□□□□□ -0.39
TRAPPC1-202ENST00000540486 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
TRAPPC1-202ENST00000540486 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
TRAPPC1-202ENST00000540486 QRICH2Q9H0J4 1663 aa12.6□□□□□ -0.39
TRAPPC1-202ENST00000540486 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
TRAPPC1-202ENST00000540486 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.59□□□□□ -0.39
TRAPPC1-202ENST00000540486 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
TRAPPC1-202ENST00000540486 FCHSD2O94868 740 aa12.59□□□□□ -0.39
TRAPPC1-202ENST00000540486 EVC2Q86UK5 1308 aa12.59□□□□□ -0.39
TRAPPC1-202ENST00000540486 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
TRAPPC1-202ENST00000540486 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
TRAPPC1-202ENST00000540486 PHF14O94880 888 aa12.57□□□□□ -0.4
TRAPPC1-202ENST00000540486 NBPF1Q3BBV0 1214 aa12.57□□□□□ -0.4
TRAPPC1-202ENST00000540486 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC1-202ENST00000540486 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
TRAPPC1-202ENST00000540486 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
TRAPPC1-202ENST00000540486 MMP10P09238 476 aa12.56□□□□□ -0.4
TRAPPC1-202ENST00000540486 VEGFAP15692 232 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC1-202ENST00000540486 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms