RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 RGPD4Q7Z3J3 1758 aa18.18■□□□□ 0.5
CCDC130-202ENST00000540216 NHSQ6T4R5 1651 aa18.18■□□□□ 0.5
CCDC130-202ENST00000540216 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
CCDC130-202ENST00000540216 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
CCDC130-202ENST00000540216 IGSF1Q8N6C5 1336 aa18.17■□□□□ 0.5
CCDC130-202ENST00000540216 PKD1L3Q7Z443 1732 aa18.16■□□□□ 0.5
CCDC130-202ENST00000540216 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
CCDC130-202ENST00000540216 CAMKK2Q96RR4 588 aa18.16■□□□□ 0.5
CCDC130-202ENST00000540216 PCDH11XQ9BZA7 1347 aa18.16■□□□□ 0.5
CCDC130-202ENST00000540216 PCDH11YQ9BZA8 1340 aa18.16■□□□□ 0.5
CCDC130-202ENST00000540216 MTHFSP49914 203 aa18.15■□□□□ 0.5
CCDC130-202ENST00000540216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.49
CCDC130-202ENST00000540216 RREB1Q92766 1687 aa18.14■□□□□ 0.49
CCDC130-202ENST00000540216 PLSCR1O15162 318 aa18.13■□□□□ 0.49
CCDC130-202ENST00000540216 EZH2Q15910 746 aaKnown RBP18.12■□□□□ 0.49
CCDC130-202ENST00000540216 SPG7Q9UQ90 795 aa18.12■□□□□ 0.49
CCDC130-202ENST00000540216 IL13P35225 146 aa18.11■□□□□ 0.49
CCDC130-202ENST00000540216 DOT1LQ8TEK3 1739 aa18.1■□□□□ 0.49
CCDC130-202ENST00000540216 KCNQ2O43526 872 aa18.1■□□□□ 0.49
CCDC130-202ENST00000540216 PTF1AQ7RTS3 328 aa18.1■□□□□ 0.49
CCDC130-202ENST00000540216 ACSBG1Q96GR2 724 aa18.1■□□□□ 0.49
CCDC130-202ENST00000540216 KDRP35968 1356 aa18.09■□□□□ 0.49
CCDC130-202ENST00000540216 NUP188Q5SRE5 1749 aa18.09■□□□□ 0.49
CCDC130-202ENST00000540216 BTAF1O14981 1849 aa18.08■□□□□ 0.48
CCDC130-202ENST00000540216 DIAPH1O60610 1272 aaKnown RBP18.08■□□□□ 0.48
CCDC130-202ENST00000540216 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.48
CCDC130-202ENST00000540216 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
CCDC130-202ENST00000540216 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
CCDC130-202ENST00000540216 CYP27B1O15528 508 aa18.07■□□□□ 0.48
CCDC130-202ENST00000540216 CFAP53Q96M91 514 aa18.06■□□□□ 0.48
CCDC130-202ENST00000540216 PRIM1P49642 420 aaKnown RBP18.05■□□□□ 0.48
CCDC130-202ENST00000540216 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
CCDC130-202ENST00000540216 AMOTQ4VCS5 1084 aa18.05■□□□□ 0.48
CCDC130-202ENST00000540216 SULT6B1Q6IMI4 303 aa18.05■□□□□ 0.48
CCDC130-202ENST00000540216 PPP2R1AP30153 589 aa18.04■□□□□ 0.48
CCDC130-202ENST00000540216 PLEKHO1Q53GL0 409 aaPredicted RBP18.04■□□□□ 0.48
CCDC130-202ENST00000540216 NBPF14Q5TI25 921 aa18.04■□□□□ 0.48
CCDC130-202ENST00000540216 AEBP1Q8IUX7 1158 aa18.04■□□□□ 0.48
CCDC130-202ENST00000540216 IFNL2Q8IZJ0 200 aa18.04■□□□□ 0.48
CCDC130-202ENST00000540216 SYTL4Q96C24 671 aaPredicted RBP18.04■□□□□ 0.48
CCDC130-202ENST00000540216 TXNRD1Q16881 649 aa18.03■□□□□ 0.48
CCDC130-202ENST00000540216 PHKG2P15735 406 aa18.02■□□□□ 0.48
CCDC130-202ENST00000540216 DDX10Q13206 875 aaKnown RBP18.02■□□□□ 0.48
CCDC130-202ENST00000540216 TOGARAM1Q9Y4F4 1720 aa18.02■□□□□ 0.48
CCDC130-202ENST00000540216 HSP90AB1P08238 724 aaKnown RBP18.01■□□□□ 0.47
CCDC130-202ENST00000540216 PROM2Q8N271 834 aa18.01■□□□□ 0.47
CCDC130-202ENST00000540216 RALBP1Q15311 655 aa17.99■□□□□ 0.47
CCDC130-202ENST00000540216 SLC27A3Q5K4L6 730 aa17.99■□□□□ 0.47
CCDC130-202ENST00000540216 ZNF530Q6P9A1 599 aaPredicted RBP17.99■□□□□ 0.47
CCDC130-202ENST00000540216 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
CCDC130-202ENST00000540216 ITGB4P16144 1822 aa17.98■□□□□ 0.47
CCDC130-202ENST00000540216 HMOX1P09601 288 aa17.98■□□□□ 0.47
CCDC130-202ENST00000540216 R3HDM1Q15032 1099 aaKnown RBP17.98■□□□□ 0.47
CCDC130-202ENST00000540216 C1orf141Q5JVX7 400 aa17.98■□□□□ 0.47
CCDC130-202ENST00000540216 DCAF5Q96JK2 942 aa17.98■□□□□ 0.47
CCDC130-202ENST00000540216 LY75O60449 1722 aa17.98■□□□□ 0.47
CCDC130-202ENST00000540216 PSDA5PKW4 1024 aaPredicted RBP17.97■□□□□ 0.47
CCDC130-202ENST00000540216 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
CCDC130-202ENST00000540216 PAPPAQ13219 1627 aa17.97■□□□□ 0.47
CCDC130-202ENST00000540216 HMGB2P26583 209 aaKnown RBP17.96■□□□□ 0.47
CCDC130-202ENST00000540216 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
CCDC130-202ENST00000540216 ERVV-2B6SEH9 535 aa17.95■□□□□ 0.46
CCDC130-202ENST00000540216 SMARCC1Q92922 1105 aaPredicted RBP17.95■□□□□ 0.46
CCDC130-202ENST00000540216 TMOD3Q9NYL9 352 aa17.95■□□□□ 0.46
CCDC130-202ENST00000540216 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
CCDC130-202ENST00000540216 STK32BQ9NY57 414 aa17.94■□□□□ 0.46
CCDC130-202ENST00000540216 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
CCDC130-202ENST00000540216 PALLDQ8WX93 1383 aa17.93■□□□□ 0.46
CCDC130-202ENST00000540216 AKAP4Q5JQC9 854 aa17.93■□□□□ 0.46
CCDC130-202ENST00000540216 PIGBQ92521 554 aa17.93■□□□□ 0.46
CCDC130-202ENST00000540216 LRP5O75197 1615 aa17.93■□□□□ 0.46
CCDC130-202ENST00000540216 LRRC4BQ9NT99 713 aa17.92■□□□□ 0.46
CCDC130-202ENST00000540216 SLC15A2Q16348 729 aa17.91■□□□□ 0.46
CCDC130-202ENST00000540216 CCNL1Q9UK58 526 aaPredicted RBP17.91■□□□□ 0.46
CCDC130-202ENST00000540216 SCN11AQ9UI33 1791 aa17.9■□□□□ 0.46
CCDC130-202ENST00000540216 ZNF316A6NFI3 1004 aaPredicted RBP17.9■□□□□ 0.46
CCDC130-202ENST00000540216 FCHSD2O94868 740 aa17.9■□□□□ 0.46
CCDC130-202ENST00000540216 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
CCDC130-202ENST00000540216 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCDC130-202ENST00000540216 GAS2L2Q8NHY3 880 aa17.9■□□□□ 0.46
CCDC130-202ENST00000540216 RSPH6AQ9H0K4 717 aa17.9■□□□□ 0.46
CCDC130-202ENST00000540216 MYBBP1AQ9BQG0 1328 aaKnown RBP17.9■□□□□ 0.46
CCDC130-202ENST00000540216 PRKAR2BP31323 418 aa17.89■□□□□ 0.45
CCDC130-202ENST00000540216 CABP4P57796 275 aa17.89■□□□□ 0.45
CCDC130-202ENST00000540216 MTHFSDQ2M296 383 aaKnown RBP17.89■□□□□ 0.45
CCDC130-202ENST00000540216 ADAMTS7Q9UKP4 1686 aa17.88■□□□□ 0.45
CCDC130-202ENST00000540216 CASZ1Q86V15 1759 aa17.88■□□□□ 0.45
CCDC130-202ENST00000540216 MRC1P22897 1456 aa17.88■□□□□ 0.45
CCDC130-202ENST00000540216 C5P01031 1676 aa17.87■□□□□ 0.45
CCDC130-202ENST00000540216 AKT1S1Q96B36 256 aa17.87■□□□□ 0.45
CCDC130-202ENST00000540216 MAP3K5Q99683 1374 aa17.87■□□□□ 0.45
CCDC130-202ENST00000540216 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
CCDC130-202ENST00000540216 ZNF827Q17R98 1081 aa17.86■□□□□ 0.45
CCDC130-202ENST00000540216 ATG3Q9NT62 314 aa17.86■□□□□ 0.45
CCDC130-202ENST00000540216 ASAP1Q9ULH1 1129 aa17.86■□□□□ 0.45
CCDC130-202ENST00000540216 LOC102724428A0A0B4J2F2 783 aa17.85■□□□□ 0.45
CCDC130-202ENST00000540216 RNMTO43148 476 aaKnown RBP17.85■□□□□ 0.45
CCDC130-202ENST00000540216 KCNQ4P56696 695 aa17.85■□□□□ 0.45
CCDC130-202ENST00000540216 SIK1P57059 783 aa17.85■□□□□ 0.45
CCDC130-202ENST00000540216 ZNF831Q5JPB2 1677 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms