RNA–Protein interactions for RNA: ENST00000539643.1

SLC38A10-203, Transcript of solute carrier family 38 member 10, humanhuman

TSL 1 (best)

Gene SLC38A10, Length 1,988 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-203ENST00000539643 LMOD2Q6P5Q4 547 aa23.03■■□□□ 1.28
SLC38A10-203ENST00000539643 MBIPQ9NS73 344 aa23.03■■□□□ 1.28
SLC38A10-203ENST00000539643 LAS1LQ9Y4W2 734 aaKnown RBP23.03■■□□□ 1.28
SLC38A10-203ENST00000539643 SLIT3O75094 1523 aa23.03■■□□□ 1.28
SLC38A10-203ENST00000539643 DDX19BQ9UMR2 479 aa23.03■■□□□ 1.28
SLC38A10-203ENST00000539643 NBR1Q14596 966 aa23.02■■□□□ 1.28
SLC38A10-203ENST00000539643 IPO8O15397 1037 aaKnown RBP23.01■■□□□ 1.27
SLC38A10-203ENST00000539643 GCP02774 474 aa23.01■■□□□ 1.27
SLC38A10-203ENST00000539643 IP6K1Q92551 441 aa23.01■■□□□ 1.27
SLC38A10-203ENST00000539643 ITPRIPQ8IWB1 547 aa23.01■■□□□ 1.27
SLC38A10-203ENST00000539643 NPHP3Q7Z494 1330 aa23■■□□□ 1.27
SLC38A10-203ENST00000539643 USP19O94966 1318 aa23■■□□□ 1.27
SLC38A10-203ENST00000539643 VAMP4O75379 141 aa23■■□□□ 1.27
SLC38A10-203ENST00000539643 DCTN1Q14203 1278 aa23■■□□□ 1.27
SLC38A10-203ENST00000539643 DDX17Q92841 729 aaKnown RBP23■■□□□ 1.27
SLC38A10-203ENST00000539643 PDZRN3Q9UPQ7 1066 aa23■■□□□ 1.27
SLC38A10-203ENST00000539643 MTHFSDQ2M296 383 aaKnown RBP22.98■■□□□ 1.27
SLC38A10-203ENST00000539643 ALS2Q96Q42 1657 aa22.97■■□□□ 1.27
SLC38A10-203ENST00000539643 ARHGEF25Q86VW2 580 aa22.97■■□□□ 1.27
SLC38A10-203ENST00000539643 TMEM57Q8N5G2 664 aa22.97■■□□□ 1.27
SLC38A10-203ENST00000539643 GAS2L2Q8NHY3 880 aa22.97■■□□□ 1.27
SLC38A10-203ENST00000539643 CHL1O00533 1208 aa22.96■■□□□ 1.27
SLC38A10-203ENST00000539643 SLAIN2Q9P270 581 aa22.96■■□□□ 1.27
SLC38A10-203ENST00000539643 CRB1P82279 1406 aa22.96■■□□□ 1.27
SLC38A10-203ENST00000539643 BRINP3Q76B58 766 aa22.96■■□□□ 1.27
SLC38A10-203ENST00000539643 TSPYL6Q8N831 410 aa22.96■■□□□ 1.27
SLC38A10-203ENST00000539643 LTV1Q96GA3 475 aaPredicted RBP22.95■■□□□ 1.26
SLC38A10-203ENST00000539643 HTATSF1O43719 755 aaKnown RBP22.94■■□□□ 1.26
SLC38A10-203ENST00000539643 MCM10Q7L590 875 aa22.94■■□□□ 1.26
SLC38A10-203ENST00000539643 PLEKHG5O94827 1062 aa22.94■■□□□ 1.26
SLC38A10-203ENST00000539643 HDAC1Q13547 482 aaPredicted RBP22.94■■□□□ 1.26
SLC38A10-203ENST00000539643 TWISTNBQ3B726 338 aaPredicted RBP22.94■■□□□ 1.26
SLC38A10-203ENST00000539643 ZBTB7CA1YPR0 619 aa22.92■■□□□ 1.26
SLC38A10-203ENST00000539643 MRPL50Q8N5N7 158 aaKnown RBP22.92■■□□□ 1.26
SLC38A10-203ENST00000539643 C8orf58Q8NAV2 365 aa22.92■■□□□ 1.26
SLC38A10-203ENST00000539643 PXDNQ92626 1479 aa22.92■■□□□ 1.26
SLC38A10-203ENST00000539643 KIAA0232Q92628 1395 aa22.92■■□□□ 1.26
SLC38A10-203ENST00000539643 ARHGAP45Q92619 1136 aa22.92■■□□□ 1.26
SLC38A10-203ENST00000539643 ZBTB40Q9NUA8 1239 aa22.92■■□□□ 1.26
SLC38A10-203ENST00000539643 LRRC37A3O60309 1634 aa22.91■■□□□ 1.26
SLC38A10-203ENST00000539643 DAXXQ9UER7 740 aaPredicted RBP22.9■■□□□ 1.26
SLC38A10-203ENST00000539643 TNS3Q68CZ2 1445 aa22.9■■□□□ 1.26
SLC38A10-203ENST00000539643 RTF1Q92541 710 aaKnown RBP22.9■■□□□ 1.26
SLC38A10-203ENST00000539643 SPATA31A3Q5VYP0 1347 aa22.9■■□□□ 1.26
SLC38A10-203ENST00000539643 MED1Q15648 1581 aaPredicted RBP22.9■■□□□ 1.26
SLC38A10-203ENST00000539643 HAP1P54257 671 aaPredicted RBP22.89■■□□□ 1.25
SLC38A10-203ENST00000539643 RTL5Q5HYW3 569 aaPredicted RBP22.89■■□□□ 1.25
SLC38A10-203ENST00000539643 NCAPD2Q15021 1401 aa22.89■■□□□ 1.25
SLC38A10-203ENST00000539643 ELL2O00472 640 aaPredicted RBP22.87■■□□□ 1.25
SLC38A10-203ENST00000539643 NBPF6Q5VWK0 638 aa22.87■■□□□ 1.25
SLC38A10-203ENST00000539643 NBPF4Q96M43 638 aa22.87■■□□□ 1.25
SLC38A10-203ENST00000539643 GNAT3A8MTJ3 354 aa22.86■■□□□ 1.25
SLC38A10-203ENST00000539643 ZC3H6P61129 1189 aaKnown RBP22.86■■□□□ 1.25
SLC38A10-203ENST00000539643 MAP3K5Q99683 1374 aa22.86■■□□□ 1.25
SLC38A10-203ENST00000539643 SEC24BO95487 1268 aa22.85■■□□□ 1.25
SLC38A10-203ENST00000539643 SLC4A3P48751 1232 aa22.85■■□□□ 1.25
SLC38A10-203ENST00000539643 SMC5Q8IY18 1101 aa22.85■■□□□ 1.25
SLC38A10-203ENST00000539643 AXIN2Q9Y2T1 843 aa22.85■■□□□ 1.25
SLC38A10-203ENST00000539643 SOS2Q07890 1332 aaPredicted RBP22.84■■□□□ 1.25
SLC38A10-203ENST00000539643 CAMTA1Q9Y6Y1 1673 aa22.84■■□□□ 1.25
SLC38A10-203ENST00000539643 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
SLC38A10-203ENST00000539643 USHBP1Q8N6Y0 703 aa22.84■■□□□ 1.25
SLC38A10-203ENST00000539643 CHMP4BQ9H444 224 aaKnown RBP22.83■■□□□ 1.25
SLC38A10-203ENST00000539643 CABLES1Q8TDN4 633 aa22.83■■□□□ 1.24
SLC38A10-203ENST00000539643 ANKRD24Q8TF21 1146 aa22.83■■□□□ 1.24
SLC38A10-203ENST00000539643 LRRC59Q96AG4 307 aaKnown RBP22.82■■□□□ 1.24
SLC38A10-203ENST00000539643 RGPD2P0DJD1 1756 aa22.82■■□□□ 1.24
SLC38A10-203ENST00000539643 ABCC4O15439 1325 aa22.81■■□□□ 1.24
SLC38A10-203ENST00000539643 BABAM1Q9NWV8 329 aa22.81■■□□□ 1.24
SLC38A10-203ENST00000539643 KRT24Q2M2I5 525 aa22.8■■□□□ 1.24
SLC38A10-203ENST00000539643 IL17REQ8NFR9 667 aa22.8■■□□□ 1.24
SLC38A10-203ENST00000539643 TSPYL4Q9UJ04 414 aa22.8■■□□□ 1.24
SLC38A10-203ENST00000539643 ZBTB7BO15156 539 aaPredicted RBP22.8■■□□□ 1.24
SLC38A10-203ENST00000539643 UPF2Q9HAU5 1272 aaKnown RBP22.8■■□□□ 1.24
SLC38A10-203ENST00000539643 CEMIPQ8WUJ3 1361 aa22.78■■□□□ 1.24
SLC38A10-203ENST00000539643 API5Q9BZZ5 524 aaKnown RBP22.78■■□□□ 1.24
SLC38A10-203ENST00000539643 RGPD5Q99666 1765 aa22.78■■□□□ 1.24
SLC38A10-203ENST00000539643 CRYBG1Q9Y4K1 1723 aa22.77■■□□□ 1.24
SLC38A10-203ENST00000539643 DEKP35659 375 aaKnown RBP22.77■■□□□ 1.24
SLC38A10-203ENST00000539643 MIS18AQ9NYP9 233 aa22.77■■□□□ 1.24
SLC38A10-203ENST00000539643 USP35Q9P2H5 1018 aa22.77■■□□□ 1.24
SLC38A10-203ENST00000539643 ERBB3P21860 1342 aa22.77■■□□□ 1.24
SLC38A10-203ENST00000539643 LMO7Q8WWI1 1683 aa22.77■■□□□ 1.24
SLC38A10-203ENST00000539643 ABCC6O95255 1503 aa22.77■■□□□ 1.24
SLC38A10-203ENST00000539643 NUCB1Q02818 461 aa22.76■■□□□ 1.23
SLC38A10-203ENST00000539643 COL18A1P39060 1754 aa22.75■■□□□ 1.23
SLC38A10-203ENST00000539643 AMOTQ4VCS5 1084 aa22.75■■□□□ 1.23
SLC38A10-203ENST00000539643 CPDO75976 1380 aa22.75■■□□□ 1.23
SLC38A10-203ENST00000539643 TAF7Q15545 349 aaPredicted RBP22.74■■□□□ 1.23
SLC38A10-203ENST00000539643 SOS1Q07889 1333 aaPredicted RBP22.74■■□□□ 1.23
SLC38A10-203ENST00000539643 PLEKHO1Q53GL0 409 aaPredicted RBP22.73■■□□□ 1.23
SLC38A10-203ENST00000539643 TBC1D32Q96NH3 1257 aa22.73■■□□□ 1.23
SLC38A10-203ENST00000539643 RGS12O14924 1447 aa22.73■■□□□ 1.23
SLC38A10-203ENST00000539643 NHSL1Q5SYE7 1610 aa22.73■■□□□ 1.23
SLC38A10-203ENST00000539643 C1orf115Q9H7X2 142 aa22.72■■□□□ 1.23
SLC38A10-203ENST00000539643 PTPRCP08575 1304 aa22.72■■□□□ 1.23
SLC38A10-203ENST00000539643 LTBP4Q8N2S1 1624 aa22.72■■□□□ 1.23
SLC38A10-203ENST00000539643 CHRNA2Q15822 529 aa22.72■■□□□ 1.23
SLC38A10-203ENST00000539643 AKAP4Q5JQC9 854 aa22.72■■□□□ 1.23
SLC38A10-203ENST00000539643 CHD1LQ86WJ1 897 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms