RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 INTS3Q68E01 1043 aaKnown RBP22.56■■□□□ 1.2
GNE-204ENST00000539208 HTATSF1O43719 755 aaKnown RBP22.55■■□□□ 1.2
GNE-204ENST00000539208 GAS2L2Q8NHY3 880 aa22.55■■□□□ 1.2
GNE-204ENST00000539208 PTPRCP08575 1304 aa22.54■■□□□ 1.2
GNE-204ENST00000539208 RTF1Q92541 710 aaKnown RBP22.53■■□□□ 1.2
GNE-204ENST00000539208 HOXC9P31274 260 aa22.53■■□□□ 1.2
GNE-204ENST00000539208 RGS12O14924 1447 aa22.53■■□□□ 1.2
GNE-204ENST00000539208 SIRT2Q8IXJ6 389 aa22.52■■□□□ 1.2
GNE-204ENST00000539208 ABTB2Q8N961 1025 aa22.51■■□□□ 1.19
GNE-204ENST00000539208 PHF8Q9UPP1 1060 aa22.51■■□□□ 1.19
GNE-204ENST00000539208 NWD1Q149M9 1564 aa22.51■■□□□ 1.19
GNE-204ENST00000539208 ADAMTSL3P82987 1691 aa22.51■■□□□ 1.19
GNE-204ENST00000539208 FOXO3O43524 673 aa22.5■■□□□ 1.19
GNE-204ENST00000539208 KRT24Q2M2I5 525 aa22.5■■□□□ 1.19
GNE-204ENST00000539208 LNPKQ9C0E8 428 aa22.5■■□□□ 1.19
GNE-204ENST00000539208 RTL1A6NKG5 1358 aa22.5■■□□□ 1.19
GNE-204ENST00000539208 C1orf115Q9H7X2 142 aa22.5■■□□□ 1.19
GNE-204ENST00000539208 LRRC37A3O60309 1634 aa22.49■■□□□ 1.19
GNE-204ENST00000539208 NFKBIBQ15653 356 aa22.48■■□□□ 1.19
GNE-204ENST00000539208 BMP2KLQ5H9B9 411 aa22.48■■□□□ 1.19
GNE-204ENST00000539208 ANKRD45Q5TZF3 282 aa22.48■■□□□ 1.19
GNE-204ENST00000539208 ADGRL3Q9HAR2 1447 aa22.47■■□□□ 1.19
GNE-204ENST00000539208 TSPYL4Q9UJ04 414 aa22.47■■□□□ 1.19
GNE-204ENST00000539208 SETD1BQ9UPS6 1966 aaKnown RBP22.46■■□□□ 1.19
GNE-204ENST00000539208 C22orf23Q9BZE7 217 aa22.46■■□□□ 1.19
GNE-204ENST00000539208 NUTM2GQ5VZR2 741 aa22.45■■□□□ 1.18
GNE-204ENST00000539208 GNAT3A8MTJ3 354 aa22.45■■□□□ 1.18
GNE-204ENST00000539208 BABAM1Q9NWV8 329 aa22.45■■□□□ 1.18
GNE-204ENST00000539208 RPAP2Q8IXW5 612 aaPredicted RBP22.44■■□□□ 1.18
GNE-204ENST00000539208 DCTPP1Q9H773 170 aa22.44■■□□□ 1.18
GNE-204ENST00000539208 SLC4A2P04920 1241 aa22.43■■□□□ 1.18
GNE-204ENST00000539208 ANKRD44Q8N8A2 993 aa22.43■■□□□ 1.18
GNE-204ENST00000539208 MIS18AQ9NYP9 233 aa22.43■■□□□ 1.18
GNE-204ENST00000539208 SOS1Q07889 1333 aaPredicted RBP22.43■■□□□ 1.18
GNE-204ENST00000539208 NFAT5O94916 1531 aa22.42■■□□□ 1.18
GNE-204ENST00000539208 MFAP1P55081 439 aaKnown RBP22.42■■□□□ 1.18
GNE-204ENST00000539208 ATP10DQ9P241 1426 aa22.42■■□□□ 1.18
GNE-204ENST00000539208 LTN1O94822 1766 aa22.41■■□□□ 1.18
GNE-204ENST00000539208 MAP3K5Q99683 1374 aa22.41■■□□□ 1.18
GNE-204ENST00000539208 IP6K1Q92551 441 aa22.41■■□□□ 1.18
GNE-204ENST00000539208 TBC1D2Q9BYX2 928 aa22.4■■□□□ 1.18
GNE-204ENST00000539208 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
GNE-204ENST00000539208 PHRF1Q9P1Y6 1649 aaKnown RBP22.39■■□□□ 1.18
GNE-204ENST00000539208 MSH6P52701 1360 aa22.39■■□□□ 1.17
GNE-204ENST00000539208 RBM25P49756 843 aaKnown RBP22.39■■□□□ 1.17
GNE-204ENST00000539208 KCNH5Q8NCM2 988 aa22.38■■□□□ 1.17
GNE-204ENST00000539208 CCT4P50991 539 aaKnown RBP22.38■■□□□ 1.17
GNE-204ENST00000539208 PSME1Q06323 249 aa22.38■■□□□ 1.17
GNE-204ENST00000539208 CEP85Q6P2H3 762 aa22.38■■□□□ 1.17
GNE-204ENST00000539208 C14orf37Q86TY3 774 aa22.37■■□□□ 1.17
GNE-204ENST00000539208 IL17REQ8NFR9 667 aa22.37■■□□□ 1.17
GNE-204ENST00000539208 ANTXR1Q9H6X2 564 aa22.37■■□□□ 1.17
GNE-204ENST00000539208 ESCO1Q5FWF5 840 aa22.36■■□□□ 1.17
GNE-204ENST00000539208 TAF7Q15545 349 aaPredicted RBP22.36■■□□□ 1.17
GNE-204ENST00000539208 STK31Q9BXU1 1019 aa22.36■■□□□ 1.17
GNE-204ENST00000539208 CCDC30Q5VVM6 783 aa22.35■■□□□ 1.17
GNE-204ENST00000539208 G2E3Q7L622 706 aa22.35■■□□□ 1.17
GNE-204ENST00000539208 LTV1Q96GA3 475 aaPredicted RBP22.35■■□□□ 1.17
GNE-204ENST00000539208 FAM208AQ9UK61 1670 aaKnown RBP22.34■■□□□ 1.17
GNE-204ENST00000539208 MEIS3Q99687 375 aa22.34■■□□□ 1.17
GNE-204ENST00000539208 CACNA1FO60840 1977 aa22.34■■□□□ 1.17
GNE-204ENST00000539208 PLEKHM2Q8IWE5 1019 aa22.33■■□□□ 1.17
GNE-204ENST00000539208 RBM33Q96EV2 1170 aaKnown RBP22.33■■□□□ 1.17
GNE-204ENST00000539208 EIF5BO60841 1220 aaKnown RBP22.33■■□□□ 1.16
GNE-204ENST00000539208 CEMIPQ8WUJ3 1361 aa22.32■■□□□ 1.16
GNE-204ENST00000539208 FRAT2O75474 233 aaPredicted RBP22.32■■□□□ 1.16
GNE-204ENST00000539208 TBC1D9Q6ZT07 1266 aa22.31■■□□□ 1.16
GNE-204ENST00000539208 SLIT3O75094 1523 aa22.3■■□□□ 1.16
GNE-204ENST00000539208 HMMRO75330 724 aa22.3■■□□□ 1.16
GNE-204ENST00000539208 NBPF6Q5VWK0 638 aa22.3■■□□□ 1.16
GNE-204ENST00000539208 NBPF4Q96M43 638 aa22.3■■□□□ 1.16
GNE-204ENST00000539208 MED1Q15648 1581 aaPredicted RBP22.29■■□□□ 1.16
GNE-204ENST00000539208 FLIIQ13045 1269 aa22.29■■□□□ 1.16
GNE-204ENST00000539208 CDC45O75419 566 aa22.29■■□□□ 1.16
GNE-204ENST00000539208 USHBP1Q8N6Y0 703 aa22.29■■□□□ 1.16
GNE-204ENST00000539208 SNX21Q969T3 373 aa22.29■■□□□ 1.16
GNE-204ENST00000539208 SLKQ9H2G2 1235 aaPredicted RBP22.29■■□□□ 1.16
GNE-204ENST00000539208 F6X3S4 739 aa22.28■■□□□ 1.16
GNE-204ENST00000539208 TTC22Q5TAA0 569 aa22.28■■□□□ 1.16
GNE-204ENST00000539208 SLC4A10Q6U841 1118 aa22.28■■□□□ 1.16
GNE-204ENST00000539208 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
GNE-204ENST00000539208 NCAPD2Q15021 1401 aa22.27■■□□□ 1.16
GNE-204ENST00000539208 GSPT1P15170 499 aaKnown RBP22.27■■□□□ 1.16
GNE-204ENST00000539208 PXDNLA1KZ92 1463 aa22.27■■□□□ 1.15
GNE-204ENST00000539208 GSE1Q14687 1217 aa22.26■■□□□ 1.15
GNE-204ENST00000539208 GNAI2P04899 355 aa22.26■■□□□ 1.15
GNE-204ENST00000539208 ORAI2Q96SN7 254 aa22.26■■□□□ 1.15
GNE-204ENST00000539208 LMO7Q8WWI1 1683 aa22.25■■□□□ 1.15
GNE-204ENST00000539208 GCP02774 474 aa22.25■■□□□ 1.15
GNE-204ENST00000539208 GNAI3P08754 354 aa22.25■■□□□ 1.15
GNE-204ENST00000539208 ARHGEF25Q86VW2 580 aa22.25■■□□□ 1.15
GNE-204ENST00000539208 HSCBQ8IWL3 235 aa22.25■■□□□ 1.15
GNE-204ENST00000539208 FKBP5Q13451 457 aaPredicted RBP22.25■■□□□ 1.15
GNE-204ENST00000539208 CHMP4AQ9BY43 222 aa22.25■■□□□ 1.15
GNE-204ENST00000539208 HOXB7P09629 217 aa22.24■■□□□ 1.15
GNE-204ENST00000539208 TRPM3Q9HCF6 1732 aaPredicted RBP22.24■■□□□ 1.15
GNE-204ENST00000539208 MST1RQ04912 1400 aa22.24■■□□□ 1.15
GNE-204ENST00000539208 KIF1AQ12756 1690 aa22.24■■□□□ 1.15
GNE-204ENST00000539208 C16orf71Q8IYS4 520 aaPredicted RBP22.23■■□□□ 1.15
GNE-204ENST00000539208 KDM3BQ7LBC6 1761 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms