RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 DDX54Q8TDD1 881 aaKnown RBP11.36□□□□□ -0.59
LPCAT3-208ENST00000538987 PHACTR3Q96KR7 559 aa11.36□□□□□ -0.59
LPCAT3-208ENST00000538987 RGS17Q9UGC6 210 aaPredicted RBP11.36□□□□□ -0.59
LPCAT3-208ENST00000538987 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
LPCAT3-208ENST00000538987 ATRNO75882 1429 aa11.35□□□□□ -0.59
LPCAT3-208ENST00000538987 APAF1O14727 1248 aa11.35□□□□□ -0.59
LPCAT3-208ENST00000538987 PDE3BQ13370 1112 aa11.35□□□□□ -0.59
LPCAT3-208ENST00000538987 C1orf141Q5JVX7 400 aa11.35□□□□□ -0.59
LPCAT3-208ENST00000538987 POTEAQ6S8J7 498 aa11.35□□□□□ -0.59
LPCAT3-208ENST00000538987 PLEKHF1Q96S99 279 aa11.35□□□□□ -0.59
LPCAT3-208ENST00000538987 KDRP35968 1356 aa11.35□□□□□ -0.59
LPCAT3-208ENST00000538987 RIPK4P57078 832 aa11.34□□□□□ -0.59
LPCAT3-208ENST00000538987 MTHFSDQ2M296 383 aaKnown RBP11.34□□□□□ -0.59
LPCAT3-208ENST00000538987 ZNF530Q6P9A1 599 aaPredicted RBP11.34□□□□□ -0.59
LPCAT3-208ENST00000538987 GAS2L2Q8NHY3 880 aa11.34□□□□□ -0.59
LPCAT3-208ENST00000538987 YTHDC1Q96MU7 727 aaKnown RBP11.34□□□□□ -0.59
LPCAT3-208ENST00000538987 RRP7AQ9Y3A4 280 aaKnown RBP11.34□□□□□ -0.59
LPCAT3-208ENST00000538987 NRAPQ86VF7 1730 aa11.34□□□□□ -0.59
LPCAT3-208ENST00000538987 SEPT12Q8IYM1 358 aa11.33□□□□□ -0.6
LPCAT3-208ENST00000538987 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
LPCAT3-208ENST00000538987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
LPCAT3-208ENST00000538987 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
LPCAT3-208ENST00000538987 RGPD2P0DJD1 1756 aa11.32□□□□□ -0.6
LPCAT3-208ENST00000538987 TMPOP42166 694 aaKnown RBP11.32□□□□□ -0.6
LPCAT3-208ENST00000538987 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
LPCAT3-208ENST00000538987 NFE2L2Q16236 605 aa11.32□□□□□ -0.6
LPCAT3-208ENST00000538987 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
LPCAT3-208ENST00000538987 MEGF6O75095 1541 aa11.31□□□□□ -0.6
LPCAT3-208ENST00000538987 GNAT3A8MTJ3 354 aa11.31□□□□□ -0.6
LPCAT3-208ENST00000538987 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
LPCAT3-208ENST00000538987 AKAP4Q5JQC9 854 aa11.31□□□□□ -0.6
LPCAT3-208ENST00000538987 NCAPD2Q15021 1401 aa11.31□□□□□ -0.6
LPCAT3-208ENST00000538987 RGPD1P0DJD0 1748 aa11.31□□□□□ -0.6
LPCAT3-208ENST00000538987 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
LPCAT3-208ENST00000538987 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
LPCAT3-208ENST00000538987 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.3□□□□□ -0.6
LPCAT3-208ENST00000538987 OVOS2A0A0G2JMS6 1433 aa11.3□□□□□ -0.6
LPCAT3-208ENST00000538987 HSP90AB1P08238 724 aaKnown RBP11.3□□□□□ -0.6
LPCAT3-208ENST00000538987 PHKG2P15735 406 aa11.3□□□□□ -0.6
LPCAT3-208ENST00000538987 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
LPCAT3-208ENST00000538987 MPRIPQ6WCQ1 1025 aa11.3□□□□□ -0.6
LPCAT3-208ENST00000538987 CYP27B1O15528 508 aa11.29□□□□□ -0.6
LPCAT3-208ENST00000538987 KRT27Q7Z3Y8 459 aa11.29□□□□□ -0.6
LPCAT3-208ENST00000538987 DISP2A7MBM2 1401 aa11.28□□□□□ -0.6
LPCAT3-208ENST00000538987 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
LPCAT3-208ENST00000538987 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
LPCAT3-208ENST00000538987 MCM10Q7L590 875 aa11.28□□□□□ -0.6
LPCAT3-208ENST00000538987 GLI3P10071 1580 aa11.28□□□□□ -0.6
LPCAT3-208ENST00000538987 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
LPCAT3-208ENST00000538987 HTATSF1O43719 755 aaKnown RBP11.27□□□□□ -0.61
LPCAT3-208ENST00000538987 NGEFQ8N5V2 710 aa11.27□□□□□ -0.61
LPCAT3-208ENST00000538987 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.61
LPCAT3-208ENST00000538987 SYTL4Q96C24 671 aaPredicted RBP11.27□□□□□ -0.61
LPCAT3-208ENST00000538987 DCAF5Q96JK2 942 aa11.27□□□□□ -0.61
LPCAT3-208ENST00000538987 LGR6Q9HBX8 967 aa11.27□□□□□ -0.61
LPCAT3-208ENST00000538987 LAS1LQ9Y4W2 734 aaKnown RBP11.27□□□□□ -0.61
LPCAT3-208ENST00000538987 PLEKHG2Q9H7P9 1386 aa11.27□□□□□ -0.61
LPCAT3-208ENST00000538987 RNMTO43148 476 aaKnown RBP11.26□□□□□ -0.61
LPCAT3-208ENST00000538987 CABP4P57796 275 aa11.26□□□□□ -0.61
LPCAT3-208ENST00000538987 TEFQ10587 303 aa11.26□□□□□ -0.61
LPCAT3-208ENST00000538987 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
LPCAT3-208ENST00000538987 PARP4Q9UKK3 1724 aaKnown RBP11.26□□□□□ -0.61
LPCAT3-208ENST00000538987 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
LPCAT3-208ENST00000538987 CALD1Q05682 793 aaKnown RBP11.25□□□□□ -0.61
LPCAT3-208ENST00000538987 WWC1Q8IX03 1113 aa11.25□□□□□ -0.61
LPCAT3-208ENST00000538987 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
LPCAT3-208ENST00000538987 THUMPD2Q9BTF0 503 aaKnown RBP11.25□□□□□ -0.61
LPCAT3-208ENST00000538987 TRIM35Q9UPQ4 493 aa11.25□□□□□ -0.61
LPCAT3-208ENST00000538987 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
LPCAT3-208ENST00000538987 CCDC27Q2M243 656 aa11.24□□□□□ -0.61
LPCAT3-208ENST00000538987 FAM196AQ6ZSG2 479 aa11.24□□□□□ -0.61
LPCAT3-208ENST00000538987 NFATC2IPQ8NCF5 419 aa11.24□□□□□ -0.61
LPCAT3-208ENST00000538987 ERVV-2B6SEH9 535 aa11.23□□□□□ -0.61
LPCAT3-208ENST00000538987 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
LPCAT3-208ENST00000538987 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
LPCAT3-208ENST00000538987 TMOD3Q9NYL9 352 aa11.23□□□□□ -0.61
LPCAT3-208ENST00000538987 RGS12O14924 1447 aa11.22□□□□□ -0.61
LPCAT3-208ENST00000538987 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
LPCAT3-208ENST00000538987 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
LPCAT3-208ENST00000538987 WDR63Q8IWG1 891 aa11.22□□□□□ -0.61
LPCAT3-208ENST00000538987 SLC52A2Q9HAB3 445 aa11.22□□□□□ -0.61
LPCAT3-208ENST00000538987 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
LPCAT3-208ENST00000538987 BTBD11A6QL63 1104 aa11.21□□□□□ -0.61
LPCAT3-208ENST00000538987 MIS18AQ9NYP9 233 aa11.21□□□□□ -0.61
LPCAT3-208ENST00000538987 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
LPCAT3-208ENST00000538987 KCNQ2O43526 872 aa11.2□□□□□ -0.62
LPCAT3-208ENST00000538987 GNAI1P63096 354 aa11.2□□□□□ -0.62
LPCAT3-208ENST00000538987 TSPYL4Q9UJ04 414 aa11.2□□□□□ -0.62
LPCAT3-208ENST00000538987 PKD1L3Q7Z443 1732 aa11.2□□□□□ -0.62
LPCAT3-208ENST00000538987 KDM6AO15550 1401 aaPredicted RBP11.19□□□□□ -0.62
LPCAT3-208ENST00000538987 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
LPCAT3-208ENST00000538987 ZBED9Q6R2W3 1325 aa11.19□□□□□ -0.62
LPCAT3-208ENST00000538987 TRIM37O94972 964 aa11.19□□□□□ -0.62
LPCAT3-208ENST00000538987 TTC5Q8N0Z6 440 aa11.19□□□□□ -0.62
LPCAT3-208ENST00000538987 PIGBQ92521 554 aa11.19□□□□□ -0.62
LPCAT3-208ENST00000538987 CFAP44Q96MT7 982 aa11.19□□□□□ -0.62
LPCAT3-208ENST00000538987 MYH16Q9H6N6 1097 aa11.19□□□□□ -0.62
LPCAT3-208ENST00000538987 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
LPCAT3-208ENST00000538987 SLC39A6Q13433 755 aa11.18□□□□□ -0.62
LPCAT3-208ENST00000538987 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms