RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 KIAA0754O94854 1291 aa16.73■□□□□ 0.27
PLXNB3-209ENST00000538966 MCM4P33991 863 aa16.73■□□□□ 0.27
PLXNB3-209ENST00000538966 GNL3LQ9NVN8 582 aaKnown RBP16.73■□□□□ 0.27
PLXNB3-209ENST00000538966 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 SYCE3A1L190 88 aa16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 SEPT7Q16181 437 aaKnown RBP16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 AFAP1Q8N556 730 aa16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 DDX11Q96FC9 970 aa16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 SRGAP3O43295 1099 aa16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 NBPF8Q3BBV2 869 aa16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 NUTM1Q86Y26 1132 aa16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 CBFA2T2O43439 604 aa16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 SSBP05455 408 aaKnown RBP eCLIP16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 NACAP1Q9BZK3 213 aa16.72■□□□□ 0.27
PLXNB3-209ENST00000538966 SKAP1Q86WV1 359 aa16.71■□□□□ 0.27
PLXNB3-209ENST00000538966 TROQ12816 1431 aaPredicted RBP16.71■□□□□ 0.27
PLXNB3-209ENST00000538966 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.26
PLXNB3-209ENST00000538966 RRS1Q15050 365 aaKnown RBP16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 ZNF530Q6P9A1 599 aaPredicted RBP16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 ERLIN1O75477 346 aa16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
PLXNB3-209ENST00000538966 CCDC102AQ96A19 550 aa16.69■□□□□ 0.26
PLXNB3-209ENST00000538966 HFM1A2PYH4 1435 aa16.69■□□□□ 0.26
PLXNB3-209ENST00000538966 CCDC57Q2TAC2 916 aa16.69■□□□□ 0.26
PLXNB3-209ENST00000538966 ESPNB1AK53 854 aa16.69■□□□□ 0.26
PLXNB3-209ENST00000538966 NOL7Q9UMY1 257 aaKnown RBP16.69■□□□□ 0.26
PLXNB3-209ENST00000538966 CEP57L1Q8IYX8 460 aa16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 EIF3JO75822 258 aaKnown RBP16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 SMARCA5O60264 1052 aaPredicted RBP16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 TDO2P48775 406 aa16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 TMEM57Q8N5G2 664 aa16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 LUC7LQ9NQ29 371 aaKnown RBP16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 NUTM2BA6NNL0 878 aaPredicted RBP16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 NUTM2EB1AL46 878 aaPredicted RBP16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 NUTM2AQ8IVF1 878 aaPredicted RBP16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 MIS18AQ9NYP9 233 aa16.68■□□□□ 0.26
PLXNB3-209ENST00000538966 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
PLXNB3-209ENST00000538966 FERMT3Q86UX7 667 aa16.67■□□□□ 0.26
PLXNB3-209ENST00000538966 CUL7Q14999 1698 aa16.67■□□□□ 0.26
PLXNB3-209ENST00000538966 RBM5P52756 815 aaKnown RBP eCLIP16.67■□□□□ 0.26
PLXNB3-209ENST00000538966 CFAP45Q9UL16 551 aa16.67■□□□□ 0.26
PLXNB3-209ENST00000538966 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
PLXNB3-209ENST00000538966 KIAA1107Q9UPP5 1409 aa16.67■□□□□ 0.26
PLXNB3-209ENST00000538966 CCDC83Q8IWF9 413 aa16.66■□□□□ 0.26
PLXNB3-209ENST00000538966 TAF3Q5VWG9 929 aa16.66■□□□□ 0.26
PLXNB3-209ENST00000538966 KIAA1328Q86T90 577 aa16.66■□□□□ 0.26
PLXNB3-209ENST00000538966 SCAPERQ9BY12 1400 aa16.66■□□□□ 0.26
PLXNB3-209ENST00000538966 EXOC6BQ9Y2D4 811 aa16.66■□□□□ 0.26
PLXNB3-209ENST00000538966 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
PLXNB3-209ENST00000538966 ZSCAN31Q96LW9 406 aaPredicted RBP16.66■□□□□ 0.26
PLXNB3-209ENST00000538966 TOM1L2Q6ZVM7 507 aa16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 UBAC1Q9BSL1 405 aa16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 PRDM10Q9NQV6 1147 aa16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 ZRSR2Q15696 482 aaKnown RBP16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 CFAP100Q494V2 611 aa16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 DHX8Q14562 1220 aaKnown RBP16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 MAP3K11Q16584 847 aa16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 ERBINQ96RT1 1412 aa16.65■□□□□ 0.26
PLXNB3-209ENST00000538966 CDKL5O76039 1030 aa16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 RAI14Q9P0K7 980 aa16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 DAPK1P53355 1430 aa16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 EPB41L2O43491 1005 aaKnown RBP16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 PIP4K2BP78356 416 aa16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 IQGAP2Q13576 1575 aa16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
PLXNB3-209ENST00000538966 SMTNL1A8MU46 457 aa16.63■□□□□ 0.25
PLXNB3-209ENST00000538966 TMX1Q9H3N1 280 aa16.63■□□□□ 0.25
PLXNB3-209ENST00000538966 IDH1O75874 414 aaKnown RBP16.63■□□□□ 0.25
PLXNB3-209ENST00000538966 USP5P45974 858 aa16.63■□□□□ 0.25
PLXNB3-209ENST00000538966 THUMPD2Q9BTF0 503 aaKnown RBP16.63■□□□□ 0.25
PLXNB3-209ENST00000538966 MATR3P43243 847 aaKnown RBP eCLIP16.62■□□□□ 0.25
PLXNB3-209ENST00000538966 CIZ1Q9ULV3 898 aaPredicted RBP16.62■□□□□ 0.25
PLXNB3-209ENST00000538966 TXLNBQ8N3L3 684 aa16.62■□□□□ 0.25
PLXNB3-209ENST00000538966 PRPF40BQ6NWY9 871 aaKnown RBP16.62■□□□□ 0.25
PLXNB3-209ENST00000538966 GOLGA6L7A0A1B0GV03 622 aa16.62■□□□□ 0.25
PLXNB3-209ENST00000538966 SSR1P43307 286 aaKnown RBP16.62■□□□□ 0.25
PLXNB3-209ENST00000538966 CBX1P83916 185 aa16.62■□□□□ 0.25
PLXNB3-209ENST00000538966 ARHGAP29Q52LW3 1261 aa16.62■□□□□ 0.25
PLXNB3-209ENST00000538966 KIAA0586Q9BVV6 1533 aa16.62■□□□□ 0.25
PLXNB3-209ENST00000538966 SPG7Q9UQ90 795 aa16.61■□□□□ 0.25
PLXNB3-209ENST00000538966 BICDL1Q6ZP65 573 aa16.61■□□□□ 0.25
PLXNB3-209ENST00000538966 ANKRD18AQ8IVF6 992 aa16.61■□□□□ 0.25
PLXNB3-209ENST00000538966 IQCEQ6IPM2 695 aa16.61■□□□□ 0.25
PLXNB3-209ENST00000538966 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
PLXNB3-209ENST00000538966 LRP2BPQ9P2M1 347 aa16.61■□□□□ 0.25
PLXNB3-209ENST00000538966 CTNNA3Q9UI47 895 aa16.61■□□□□ 0.25
PLXNB3-209ENST00000538966 CEP126Q9P2H0 1117 aa16.61■□□□□ 0.25
PLXNB3-209ENST00000538966 UBXN4Q92575 508 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms