RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 GSE1Q14687 1217 aa31.21■■■□□ 2.59
RAB40C-204ENST00000538492 EYA1Q99502 592 aa31.21■■■□□ 2.59
RAB40C-204ENST00000538492 HAP1P54257 671 aaPredicted RBP31.2■■■□□ 2.59
RAB40C-204ENST00000538492 SPRYD3Q8NCJ5 442 aa31.2■■■□□ 2.59
RAB40C-204ENST00000538492 KIAA0232Q92628 1395 aa31.2■■■□□ 2.58
RAB40C-204ENST00000538492 XRN1Q8IZH2 1706 aaKnown RBP31.2■■■□□ 2.58
RAB40C-204ENST00000538492 RTF1Q92541 710 aaKnown RBP31.19■■■□□ 2.58
RAB40C-204ENST00000538492 ANTXR1Q9H6X2 564 aa31.19■■■□□ 2.58
RAB40C-204ENST00000538492 BMP2KLQ5H9B9 411 aa31.18■■■□□ 2.58
RAB40C-204ENST00000538492 INTS3Q68E01 1043 aaKnown RBP31.18■■■□□ 2.58
RAB40C-204ENST00000538492 CEP170BQ9Y4F5 1589 aaPredicted RBP31.18■■■□□ 2.58
RAB40C-204ENST00000538492 RGS12O14924 1447 aa31.18■■■□□ 2.58
RAB40C-204ENST00000538492 TSPYL4Q9UJ04 414 aa31.15■■■□□ 2.58
RAB40C-204ENST00000538492 KDRP35968 1356 aa31.15■■■□□ 2.58
RAB40C-204ENST00000538492 KIF24Q5T7B8 1368 aa31.15■■■□□ 2.58
RAB40C-204ENST00000538492 IGSF1Q8N6C5 1336 aa31.15■■■□□ 2.58
RAB40C-204ENST00000538492 SLC4A2P04920 1241 aa31.14■■■□□ 2.58
RAB40C-204ENST00000538492 TRHP20396 242 aaPredicted RBP31.12■■■□□ 2.57
RAB40C-204ENST00000538492 ABTB2Q8N961 1025 aa31.12■■■□□ 2.57
RAB40C-204ENST00000538492 MSH6P52701 1360 aa31.12■■■□□ 2.57
RAB40C-204ENST00000538492 ANKARQ7Z5J8 1434 aa31.11■■■□□ 2.57
RAB40C-204ENST00000538492 PTPRCP08575 1304 aa31.11■■■□□ 2.57
RAB40C-204ENST00000538492 RBM33Q96EV2 1170 aaKnown RBP31.1■■■□□ 2.57
RAB40C-204ENST00000538492 HOXC9P31274 260 aa31.1■■■□□ 2.57
RAB40C-204ENST00000538492 C14orf37Q86TY3 774 aa31.1■■■□□ 2.57
RAB40C-204ENST00000538492 GAS2L2Q8NHY3 880 aa31.1■■■□□ 2.57
RAB40C-204ENST00000538492 LTV1Q96GA3 475 aaPredicted RBP31.09■■■□□ 2.57
RAB40C-204ENST00000538492 DCTPP1Q9H773 170 aa31.09■■■□□ 2.57
RAB40C-204ENST00000538492 RBM25P49756 843 aaKnown RBP31.08■■■□□ 2.57
RAB40C-204ENST00000538492 G2E3Q7L622 706 aa31.08■■■□□ 2.57
RAB40C-204ENST00000538492 MEIS3Q99687 375 aa31.08■■■□□ 2.57
RAB40C-204ENST00000538492 ATP10DQ9P241 1426 aa31.07■■■□□ 2.56
RAB40C-204ENST00000538492 ANKRD44Q8N8A2 993 aa31.07■■■□□ 2.56
RAB40C-204ENST00000538492 TBC1D9Q6ZT07 1266 aa31.07■■■□□ 2.56
RAB40C-204ENST00000538492 MARF1Q9Y4F3 1742 aaKnown RBP31.06■■■□□ 2.56
RAB40C-204ENST00000538492 CEP85Q6P2H3 762 aa31.05■■■□□ 2.56
RAB40C-204ENST00000538492 SLC4A10Q6U841 1118 aa31.05■■■□□ 2.56
RAB40C-204ENST00000538492 RTL1A6NKG5 1358 aa31.04■■■□□ 2.56
RAB40C-204ENST00000538492 F6X3S4 739 aa31.04■■■□□ 2.56
RAB40C-204ENST00000538492 PLEKHM2Q8IWE5 1019 aa31.03■■■□□ 2.56
RAB40C-204ENST00000538492 HSCBQ8IWL3 235 aa31.03■■■□□ 2.56
RAB40C-204ENST00000538492 C16orf71Q8IYS4 520 aaPredicted RBP31.03■■■□□ 2.56
RAB40C-204ENST00000538492 RPAP2Q8IXW5 612 aaPredicted RBP31.03■■■□□ 2.56
RAB40C-204ENST00000538492 APBB1O00213 710 aa31.02■■■□□ 2.56
RAB40C-204ENST00000538492 GSPT1P15170 499 aaKnown RBP31.02■■■□□ 2.56
RAB40C-204ENST00000538492 GNAT3A8MTJ3 354 aa31.01■■■□□ 2.55
RAB40C-204ENST00000538492 USHBP1Q8N6Y0 703 aa31■■■□□ 2.55
RAB40C-204ENST00000538492 PHF8Q9UPP1 1060 aa30.99■■■□□ 2.55
RAB40C-204ENST00000538492 NECTIN2Q92692 538 aa30.99■■■□□ 2.55
RAB40C-204ENST00000538492 NWD1Q149M9 1564 aa30.98■■■□□ 2.55
RAB40C-204ENST00000538492 OTUD7AQ8TE49 926 aaPredicted RBP30.98■■■□□ 2.55
RAB40C-204ENST00000538492 HTATSF1O43719 755 aaKnown RBP30.97■■■□□ 2.55
RAB40C-204ENST00000538492 SMARCA5O60264 1052 aaPredicted RBP30.97■■■□□ 2.55
RAB40C-204ENST00000538492 ANKLE2Q86XL3 938 aa30.97■■■□□ 2.55
RAB40C-204ENST00000538492 CDC45O75419 566 aa30.96■■■□□ 2.55
RAB40C-204ENST00000538492 STK31Q9BXU1 1019 aa30.96■■■□□ 2.55
RAB40C-204ENST00000538492 IL17REQ8NFR9 667 aa30.96■■■□□ 2.55
RAB40C-204ENST00000538492 KIF2CQ99661 725 aa30.95■■■□□ 2.55
RAB40C-204ENST00000538492 TTC22Q5TAA0 569 aa30.94■■■□□ 2.54
RAB40C-204ENST00000538492 CHD2O14647 1828 aaKnown RBP30.94■■■□□ 2.54
RAB40C-204ENST00000538492 SETD1BQ9UPS6 1966 aaKnown RBP30.94■■■□□ 2.54
RAB40C-204ENST00000538492 MAP3K5Q99683 1374 aa30.93■■■□□ 2.54
RAB40C-204ENST00000538492 LRRC37A3O60309 1634 aa30.93■■■□□ 2.54
RAB40C-204ENST00000538492 CHMP5Q9NZZ3 219 aa30.93■■■□□ 2.54
RAB40C-204ENST00000538492 CCT4P50991 539 aaKnown RBP30.92■■■□□ 2.54
RAB40C-204ENST00000538492 USP54Q70EL1 1684 aa30.92■■■□□ 2.54
RAB40C-204ENST00000538492 ZBTB7CA1YPR0 619 aa30.91■■■□□ 2.54
RAB40C-204ENST00000538492 SNX21Q969T3 373 aa30.91■■■□□ 2.54
RAB40C-204ENST00000538492 LTN1O94822 1766 aa30.91■■■□□ 2.54
RAB40C-204ENST00000538492 FKBP5Q13451 457 aaPredicted RBP30.9■■■□□ 2.54
RAB40C-204ENST00000538492 ESCO1Q5FWF5 840 aa30.9■■■□□ 2.54
RAB40C-204ENST00000538492 FLIIQ13045 1269 aa30.9■■■□□ 2.54
RAB40C-204ENST00000538492 CCDC30Q5VVM6 783 aa30.9■■■□□ 2.54
RAB40C-204ENST00000538492 IL27Q8NEV9 243 aa30.89■■■□□ 2.54
RAB40C-204ENST00000538492 RBM42Q9BTD8 480 aaKnown RBP30.88■■■□□ 2.53
RAB40C-204ENST00000538492 PSME1Q06323 249 aa30.88■■■□□ 2.53
RAB40C-204ENST00000538492 TAF7Q15545 349 aaPredicted RBP30.88■■■□□ 2.53
RAB40C-204ENST00000538492 HMMRO75330 724 aa30.87■■■□□ 2.53
RAB40C-204ENST00000538492 CD2BP2O95400 341 aaKnown RBP30.87■■■□□ 2.53
RAB40C-204ENST00000538492 PLEKHG5O94827 1062 aa30.86■■■□□ 2.53
RAB40C-204ENST00000538492 HSP90AB1P08238 724 aaKnown RBP30.86■■■□□ 2.53
RAB40C-204ENST00000538492 FAM208AQ9UK61 1670 aaKnown RBP30.86■■■□□ 2.53
RAB40C-204ENST00000538492 IP6K1Q92551 441 aa30.85■■■□□ 2.53
RAB40C-204ENST00000538492 NCOA3Q9Y6Q9 1424 aa30.84■■■□□ 2.53
RAB40C-204ENST00000538492 NBPF6Q5VWK0 638 aa30.84■■■□□ 2.53
RAB40C-204ENST00000538492 NBPF4Q96M43 638 aa30.84■■■□□ 2.53
RAB40C-204ENST00000538492 BRPF3Q9ULD4 1205 aa30.84■■■□□ 2.53
RAB40C-204ENST00000538492 GNAI2P04899 355 aa30.84■■■□□ 2.53
RAB40C-204ENST00000538492 MCM4P33991 863 aa30.84■■■□□ 2.53
RAB40C-204ENST00000538492 SDSP20132 328 aa30.83■■■□□ 2.53
RAB40C-204ENST00000538492 EXOC6BQ9Y2D4 811 aa30.81■■■□□ 2.52
RAB40C-204ENST00000538492 NFAT5O94916 1531 aa30.8■■■□□ 2.52
RAB40C-204ENST00000538492 XPCQ01831 940 aaPredicted RBP30.8■■■□□ 2.52
RAB40C-204ENST00000538492 DDIT3P35638 169 aa30.79■■■□□ 2.52
RAB40C-204ENST00000538492 FOXD4L1Q9NU39 408 aa30.79■■■□□ 2.52
RAB40C-204ENST00000538492 ADGRL3Q9HAR2 1447 aa30.79■■■□□ 2.52
RAB40C-204ENST00000538492 HDGFL1Q5TGJ6 251 aa30.78■■■□□ 2.52
RAB40C-204ENST00000538492 LGR6Q9HBX8 967 aa30.78■■■□□ 2.52
RAB40C-204ENST00000538492 HSP90AA1P07900 732 aaKnown RBP30.77■■■□□ 2.52
RAB40C-204ENST00000538492 LRRC59Q96AG4 307 aaKnown RBP30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms