RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 KRT24Q2M2I5 525 aa14.4□□□□□ -0.1
SLC28A1-204ENST00000538177 NUTM2GQ5VZR2 741 aa14.4□□□□□ -0.1
SLC28A1-204ENST00000538177 INTS3Q68E01 1043 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-204ENST00000538177 RTF1Q92541 710 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-204ENST00000538177 ADGRL3Q9HAR2 1447 aa14.39□□□□□ -0.11
SLC28A1-204ENST00000538177 SLC4A3P48751 1232 aa14.39□□□□□ -0.11
SLC28A1-204ENST00000538177 GCC1Q96CN9 775 aa14.39□□□□□ -0.11
SLC28A1-204ENST00000538177 CHD1LQ86WJ1 897 aa14.38□□□□□ -0.11
SLC28A1-204ENST00000538177 TBC1D32Q96NH3 1257 aa14.38□□□□□ -0.11
SLC28A1-204ENST00000538177 UPF2Q9HAU5 1272 aaKnown RBP14.38□□□□□ -0.11
SLC28A1-204ENST00000538177 NWD1Q149M9 1564 aa14.38□□□□□ -0.11
SLC28A1-204ENST00000538177 RTL1A6NKG5 1358 aa14.38□□□□□ -0.11
SLC28A1-204ENST00000538177 SIRT2Q8IXJ6 389 aa14.37□□□□□ -0.11
SLC28A1-204ENST00000538177 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
SLC28A1-204ENST00000538177 PTPRCP08575 1304 aa14.37□□□□□ -0.11
SLC28A1-204ENST00000538177 RGS12O14924 1447 aa14.37□□□□□ -0.11
SLC28A1-204ENST00000538177 NPHP4O75161 1426 aaPredicted RBP14.37□□□□□ -0.11
SLC28A1-204ENST00000538177 RTL5Q5HYW3 569 aaPredicted RBP14.36□□□□□ -0.11
SLC28A1-204ENST00000538177 C1orf115Q9H7X2 142 aa14.36□□□□□ -0.11
SLC28A1-204ENST00000538177 TSPYL4Q9UJ04 414 aa14.36□□□□□ -0.11
SLC28A1-204ENST00000538177 IP6K1Q92551 441 aa14.35□□□□□ -0.11
SLC28A1-204ENST00000538177 RBM33Q96EV2 1170 aaKnown RBP14.35□□□□□ -0.11
SLC28A1-204ENST00000538177 LNPKQ9C0E8 428 aa14.35□□□□□ -0.11
SLC28A1-204ENST00000538177 MIS18AQ9NYP9 233 aa14.35□□□□□ -0.11
SLC28A1-204ENST00000538177 GNAT3A8MTJ3 354 aa14.34□□□□□ -0.11
SLC28A1-204ENST00000538177 ESCO1Q5FWF5 840 aa14.34□□□□□ -0.11
SLC28A1-204ENST00000538177 PSME1Q06323 249 aa14.33□□□□□ -0.11
SLC28A1-204ENST00000538177 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.11
SLC28A1-204ENST00000538177 C14orf37Q86TY3 774 aa14.33□□□□□ -0.11
SLC28A1-204ENST00000538177 BABAM1Q9NWV8 329 aa14.33□□□□□ -0.11
SLC28A1-204ENST00000538177 NFAT5O94916 1531 aa14.33□□□□□ -0.12
SLC28A1-204ENST00000538177 LRRC37A3O60309 1634 aa14.33□□□□□ -0.12
SLC28A1-204ENST00000538177 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
SLC28A1-204ENST00000538177 BECN1Q14457 450 aa14.33□□□□□ -0.12
SLC28A1-204ENST00000538177 BMP2KLQ5H9B9 411 aa14.32□□□□□ -0.12
SLC28A1-204ENST00000538177 KCNH5Q8NCM2 988 aa14.32□□□□□ -0.12
SLC28A1-204ENST00000538177 MAP3K5Q99683 1374 aa14.32□□□□□ -0.12
SLC28A1-204ENST00000538177 IL17REQ8NFR9 667 aa14.32□□□□□ -0.12
SLC28A1-204ENST00000538177 LTV1Q96GA3 475 aaPredicted RBP14.32□□□□□ -0.12
SLC28A1-204ENST00000538177 DCTPP1Q9H773 170 aa14.32□□□□□ -0.12
SLC28A1-204ENST00000538177 MSH6P52701 1360 aa14.31□□□□□ -0.12
SLC28A1-204ENST00000538177 SOS1Q07889 1333 aaPredicted RBP14.31□□□□□ -0.12
SLC28A1-204ENST00000538177 RPAP2Q8IXW5 612 aaPredicted RBP14.31□□□□□ -0.12
SLC28A1-204ENST00000538177 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
SLC28A1-204ENST00000538177 ATP10DQ9P241 1426 aa14.3□□□□□ -0.12
SLC28A1-204ENST00000538177 DEKP35659 375 aaKnown RBP14.29□□□□□ -0.12
SLC28A1-204ENST00000538177 TAF7Q15545 349 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-204ENST00000538177 C22orf23Q9BZE7 217 aa14.29□□□□□ -0.12
SLC28A1-204ENST00000538177 LTN1O94822 1766 aa14.29□□□□□ -0.12
SLC28A1-204ENST00000538177 PHRF1Q9P1Y6 1649 aaKnown RBP14.29□□□□□ -0.12
SLC28A1-204ENST00000538177 G2E3Q7L622 706 aa14.29□□□□□ -0.12
SLC28A1-204ENST00000538177 MFAP1P55081 439 aaKnown RBP14.28□□□□□ -0.12
SLC28A1-204ENST00000538177 NBPF6Q5VWK0 638 aa14.28□□□□□ -0.12
SLC28A1-204ENST00000538177 CEP85Q6P2H3 762 aa14.28□□□□□ -0.12
SLC28A1-204ENST00000538177 NBPF4Q96M43 638 aa14.28□□□□□ -0.12
SLC28A1-204ENST00000538177 ORAI2Q96SN7 254 aa14.28□□□□□ -0.12
SLC28A1-204ENST00000538177 CCT4P50991 539 aaKnown RBP14.27□□□□□ -0.12
SLC28A1-204ENST00000538177 NFKBIBQ15653 356 aa14.27□□□□□ -0.12
SLC28A1-204ENST00000538177 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.12
SLC28A1-204ENST00000538177 USHBP1Q8N6Y0 703 aa14.27□□□□□ -0.12
SLC28A1-204ENST00000538177 STK31Q9BXU1 1019 aa14.27□□□□□ -0.12
SLC28A1-204ENST00000538177 MEIS3Q99687 375 aa14.27□□□□□ -0.13
SLC28A1-204ENST00000538177 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
SLC28A1-204ENST00000538177 GCP02774 474 aa14.26□□□□□ -0.13
SLC28A1-204ENST00000538177 ARHGEF25Q86VW2 580 aa14.26□□□□□ -0.13
SLC28A1-204ENST00000538177 PROSER2Q86WR7 435 aaPredicted RBP14.26□□□□□ -0.13
SLC28A1-204ENST00000538177 TBC1D2Q9BYX2 928 aa14.26□□□□□ -0.13
SLC28A1-204ENST00000538177 SLIT3O75094 1523 aa14.25□□□□□ -0.13
SLC28A1-204ENST00000538177 RBM25P49756 843 aaKnown RBP14.24□□□□□ -0.13
SLC28A1-204ENST00000538177 PLEKHM2Q8IWE5 1019 aa14.24□□□□□ -0.13
SLC28A1-204ENST00000538177 NCAPD2Q15021 1401 aa14.24□□□□□ -0.13
SLC28A1-204ENST00000538177 F6X3S4 739 aa14.24□□□□□ -0.13
SLC28A1-204ENST00000538177 FLIIQ13045 1269 aa14.24□□□□□ -0.13
SLC28A1-204ENST00000538177 C19orf44Q9H6X5 657 aa14.24□□□□□ -0.13
SLC28A1-204ENST00000538177 CACNA1FO60840 1977 aa14.23□□□□□ -0.13
SLC28A1-204ENST00000538177 SLC4A10Q6U841 1118 aa14.23□□□□□ -0.13
SLC28A1-204ENST00000538177 MST1RQ04912 1400 aa14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 C1orf167Q5SNV9 1468 aa14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 MED1Q15648 1581 aaPredicted RBP14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 XPCQ01831 940 aaPredicted RBP14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 KRT28Q7Z3Y7 464 aa14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 ANTXR1Q9H6X2 564 aa14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 FAM208AQ9UK61 1670 aaKnown RBP14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 HMMRO75330 724 aa14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 PLEKHO1Q53GL0 409 aaPredicted RBP14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 LRRC59Q96AG4 307 aaKnown RBP14.22□□□□□ -0.13
SLC28A1-204ENST00000538177 TRPM3Q9HCF6 1732 aaPredicted RBP14.21□□□□□ -0.13
SLC28A1-204ENST00000538177 ZBTB7CA1YPR0 619 aa14.21□□□□□ -0.13
SLC28A1-204ENST00000538177 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.13
SLC28A1-204ENST00000538177 AKAP4Q5JQC9 854 aa14.21□□□□□ -0.13
SLC28A1-204ENST00000538177 TBC1D9Q6ZT07 1266 aa14.21□□□□□ -0.13
SLC28A1-204ENST00000538177 HOXB7P09629 217 aa14.2□□□□□ -0.14
SLC28A1-204ENST00000538177 GSPT1P15170 499 aaKnown RBP14.2□□□□□ -0.14
SLC28A1-204ENST00000538177 FKBP5Q13451 457 aaPredicted RBP14.2□□□□□ -0.14
SLC28A1-204ENST00000538177 LGR6Q9HBX8 967 aa14.2□□□□□ -0.14
SLC28A1-204ENST00000538177 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
SLC28A1-204ENST00000538177 GNAI2P04899 355 aa14.2□□□□□ -0.14
SLC28A1-204ENST00000538177 GNAI3P08754 354 aa14.2□□□□□ -0.14
SLC28A1-204ENST00000538177 EIF4A1P60842 406 aaKnown RBP14.2□□□□□ -0.14
SLC28A1-204ENST00000538177 TTC22Q5TAA0 569 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms