RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 PKD1L3Q7Z443 1732 aa29.55■■■□□ 2.32
RHBDL3-204ENST00000538145 TATP17735 454 aaPredicted RBP29.55■■■□□ 2.32
RHBDL3-204ENST00000538145 MARCH10Q8NA82 808 aaPredicted RBP29.54■■■□□ 2.32
RHBDL3-204ENST00000538145 FAM196AQ6ZSG2 479 aa29.53■■■□□ 2.32
RHBDL3-204ENST00000538145 SF3B2Q13435 895 aaKnown RBP29.52■■■□□ 2.32
RHBDL3-204ENST00000538145 FAM182BQ5T319 152 aa29.52■■■□□ 2.32
RHBDL3-204ENST00000538145 ZCRB1Q8TBF4 217 aaKnown RBP29.52■■■□□ 2.32
RHBDL3-204ENST00000538145 MYBBP1AQ9BQG0 1328 aaKnown RBP29.52■■■□□ 2.32
RHBDL3-204ENST00000538145 TNS1Q9HBL0 1735 aaKnown RBP29.52■■■□□ 2.32
RHBDL3-204ENST00000538145 SBF2Q86WG5 1849 aa29.51■■■□□ 2.31
RHBDL3-204ENST00000538145 DEFB132Q7Z7B7 95 aa29.5■■■□□ 2.31
RHBDL3-204ENST00000538145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.5■■■□□ 2.31
RHBDL3-204ENST00000538145 SULT6B1Q6IMI4 303 aa29.49■■■□□ 2.31
RHBDL3-204ENST00000538145 AEBP1Q8IUX7 1158 aa29.48■■■□□ 2.31
RHBDL3-204ENST00000538145 NUDCQ9Y266 331 aa29.45■■■□□ 2.3
RHBDL3-204ENST00000538145 PCDH11XQ9BZA7 1347 aa29.44■■■□□ 2.3
RHBDL3-204ENST00000538145 PCDH11YQ9BZA8 1340 aa29.44■■■□□ 2.3
RHBDL3-204ENST00000538145 BAG6P46379 1132 aa29.44■■■□□ 2.3
RHBDL3-204ENST00000538145 SPG7Q9UQ90 795 aa29.44■■■□□ 2.3
RHBDL3-204ENST00000538145 U2SURPO15042 1029 aaKnown RBP29.42■■■□□ 2.3
RHBDL3-204ENST00000538145 DDX54Q8TDD1 881 aaKnown RBP29.42■■■□□ 2.3
RHBDL3-204ENST00000538145 HMOX1P09601 288 aa29.41■■■□□ 2.3
RHBDL3-204ENST00000538145 CYP27B1O15528 508 aa29.4■■■□□ 2.3
RHBDL3-204ENST00000538145 AMOTQ4VCS5 1084 aa29.4■■■□□ 2.3
RHBDL3-204ENST00000538145 NHSQ6T4R5 1651 aa29.39■■■□□ 2.29
RHBDL3-204ENST00000538145 TRIM37O94972 964 aa29.38■■■□□ 2.29
RHBDL3-204ENST00000538145 PLEKHO1Q53GL0 409 aaPredicted RBP29.38■■■□□ 2.29
RHBDL3-204ENST00000538145 ANP32CO43423 234 aa29.36■■■□□ 2.29
RHBDL3-204ENST00000538145 NKX1-1Q15270 411 aaPredicted RBP29.36■■■□□ 2.29
RHBDL3-204ENST00000538145 KAT6BQ8WYB5 2073 aa29.36■■■□□ 2.29
RHBDL3-204ENST00000538145 RSPH6AQ9H0K4 717 aa29.35■■■□□ 2.29
RHBDL3-204ENST00000538145 DOT1LQ8TEK3 1739 aa29.35■■■□□ 2.29
RHBDL3-204ENST00000538145 U2AF1L5P0DN76 240 aaPredicted RBP29.34■■■□□ 2.29
RHBDL3-204ENST00000538145 PHKG2P15735 406 aa29.34■■■□□ 2.29
RHBDL3-204ENST00000538145 U2AF1Q01081 240 aaKnown RBP eCLIP29.34■■■□□ 2.29
RHBDL3-204ENST00000538145 EN1Q05925 392 aaPredicted RBP29.34■■■□□ 2.29
RHBDL3-204ENST00000538145 IFNL2Q8IZJ0 200 aa29.34■■■□□ 2.29
RHBDL3-204ENST00000538145 BCL11BQ9C0K0 894 aaPredicted RBP29.34■■■□□ 2.29
RHBDL3-204ENST00000538145 SRCAPQ6ZRS2 3230 aa29.34■■■□□ 2.29
RHBDL3-204ENST00000538145 FCHSD2O94868 740 aa29.33■■■□□ 2.29
RHBDL3-204ENST00000538145 TOGARAM1Q9Y4F4 1720 aa29.3■■■□□ 2.28
RHBDL3-204ENST00000538145 CAMKK2Q96RR4 588 aa29.3■■■□□ 2.28
RHBDL3-204ENST00000538145 RGPD3A6NKT7 1758 aaPredicted RBP29.29■■■□□ 2.28
RHBDL3-204ENST00000538145 RGPD4Q7Z3J3 1758 aa29.29■■■□□ 2.28
RHBDL3-204ENST00000538145 KCNQ2O43526 872 aa29.28■■■□□ 2.28
RHBDL3-204ENST00000538145 PRKAR2BP31323 418 aa29.28■■■□□ 2.28
RHBDL3-204ENST00000538145 ZNF530Q6P9A1 599 aaPredicted RBP29.28■■■□□ 2.28
RHBDL3-204ENST00000538145 PTF1AQ7RTS3 328 aa29.28■■■□□ 2.28
RHBDL3-204ENST00000538145 RREB1Q92766 1687 aa29.28■■■□□ 2.28
RHBDL3-204ENST00000538145 APBA3O96018 575 aa29.27■■■□□ 2.28
RHBDL3-204ENST00000538145 ACSBG1Q96GR2 724 aa29.27■■■□□ 2.28
RHBDL3-204ENST00000538145 BTAF1O14981 1849 aa29.27■■■□□ 2.28
RHBDL3-204ENST00000538145 ITGB4P16144 1822 aa29.26■■■□□ 2.28
RHBDL3-204ENST00000538145 HSP90AB1P08238 724 aaKnown RBP29.26■■■□□ 2.27
RHBDL3-204ENST00000538145 EZH2Q15910 746 aaKnown RBP29.26■■■□□ 2.27
RHBDL3-204ENST00000538145 MTHFSDQ2M296 383 aaKnown RBP29.26■■■□□ 2.27
RHBDL3-204ENST00000538145 AKAP4Q5JQC9 854 aa29.24■■■□□ 2.27
RHBDL3-204ENST00000538145 PLSCR1O15162 318 aa29.23■■■□□ 2.27
RHBDL3-204ENST00000538145 PRIM1P49642 420 aaKnown RBP29.23■■■□□ 2.27
RHBDL3-204ENST00000538145 C1orf141Q5JVX7 400 aa29.23■■■□□ 2.27
RHBDL3-204ENST00000538145 DCAF5Q96JK2 942 aa29.23■■■□□ 2.27
RHBDL3-204ENST00000538145 ADAMTS7Q9UKP4 1686 aa29.23■■■□□ 2.27
RHBDL3-204ENST00000538145 SCN11AQ9UI33 1791 aa29.22■■■□□ 2.27
RHBDL3-204ENST00000538145 GAS2L2Q8NHY3 880 aa29.22■■■□□ 2.27
RHBDL3-204ENST00000538145 PHACTR3Q96KR7 559 aa29.22■■■□□ 2.27
RHBDL3-204ENST00000538145 KDM6AO15550 1401 aaPredicted RBP29.22■■■□□ 2.27
RHBDL3-204ENST00000538145 VIRMAQ69YN4 1812 aaKnown RBP29.22■■■□□ 2.27
RHBDL3-204ENST00000538145 PLEKHF1Q96S99 279 aa29.21■■■□□ 2.27
RHBDL3-204ENST00000538145 PNNQ9H307 717 aaKnown RBP29.2■■■□□ 2.27
RHBDL3-204ENST00000538145 NUP188Q5SRE5 1749 aa29.2■■■□□ 2.27
RHBDL3-204ENST00000538145 CCDC184Q52MB2 194 aa29.19■■■□□ 2.26
RHBDL3-204ENST00000538145 ERVV-2B6SEH9 535 aa29.18■■■□□ 2.26
RHBDL3-204ENST00000538145 SYTL4Q96C24 671 aaPredicted RBP29.18■■■□□ 2.26
RHBDL3-204ENST00000538145 WDR43Q15061 677 aaKnown RBP eCLIP29.17■■■□□ 2.26
RHBDL3-204ENST00000538145 MPRIPQ6WCQ1 1025 aa29.15■■■□□ 2.26
RHBDL3-204ENST00000538145 MAP3K5Q99683 1374 aa29.14■■■□□ 2.26
RHBDL3-204ENST00000538145 ADAMTS8Q9UP79 889 aa29.14■■■□□ 2.25
RHBDL3-204ENST00000538145 LY75O60449 1722 aa29.13■■■□□ 2.25
RHBDL3-204ENST00000538145 MRC1P22897 1456 aa29.13■■■□□ 2.25
RHBDL3-204ENST00000538145 GNAT3A8MTJ3 354 aa29.13■■■□□ 2.25
RHBDL3-204ENST00000538145 NEFMP07197 916 aa29.13■■■□□ 2.25
RHBDL3-204ENST00000538145 PIGBQ92521 554 aa29.12■■■□□ 2.25
RHBDL3-204ENST00000538145 DLG5Q8TDM6 1919 aa29.11■■■□□ 2.25
RHBDL3-204ENST00000538145 PSDA5PKW4 1024 aaPredicted RBP29.11■■■□□ 2.25
RHBDL3-204ENST00000538145 RNMTO43148 476 aaKnown RBP29.11■■■□□ 2.25
RHBDL3-204ENST00000538145 MRS2Q9HD23 443 aa29.11■■■□□ 2.25
RHBDL3-204ENST00000538145 TMOD3Q9NYL9 352 aa29.11■■■□□ 2.25
RHBDL3-204ENST00000538145 LRP5O75197 1615 aa29.11■■■□□ 2.25
RHBDL3-204ENST00000538145 PROM2Q8N271 834 aa29.1■■■□□ 2.25
RHBDL3-204ENST00000538145 PNISRQ8TF01 805 aaKnown RBP29.1■■■□□ 2.25
RHBDL3-204ENST00000538145 LGR6Q9HBX8 967 aa29.1■■■□□ 2.25
RHBDL3-204ENST00000538145 MAPK8IP3Q9UPT6 1336 aa29.08■■■□□ 2.25
RHBDL3-204ENST00000538145 HTATSF1O43719 755 aaKnown RBP29.08■■■□□ 2.25
RHBDL3-204ENST00000538145 CEMIPQ8WUJ3 1361 aa29.07■■■□□ 2.24
RHBDL3-204ENST00000538145 CABP4P57796 275 aa29.07■■■□□ 2.24
RHBDL3-204ENST00000538145 R3HDM1Q15032 1099 aaKnown RBP29.07■■■□□ 2.24
RHBDL3-204ENST00000538145 TXNRD1Q16881 649 aa29.07■■■□□ 2.24
RHBDL3-204ENST00000538145 IL17REQ8NFR9 667 aa29.07■■■□□ 2.24
RHBDL3-204ENST00000538145 NFE2L2Q16236 605 aa29.06■■■□□ 2.24
RHBDL3-204ENST00000538145 DIEXFQ68CQ4 756 aaKnown RBP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms